RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 PI16Q6UXB8 463 aa7.42□□□□□ -1.22
CACNA1A-203ENST00000573891 SPATA5Q8NB90 893 aa7.42□□□□□ -1.22
CACNA1A-203ENST00000573891 ADAMTS19Q8TE59 1207 aa7.42□□□□□ -1.22
CACNA1A-203ENST00000573891 PBXIP1Q96AQ6 731 aa7.42□□□□□ -1.22
CACNA1A-203ENST00000573891 STAP2Q9UGK3 403 aa7.42□□□□□ -1.22
CACNA1A-203ENST00000573891 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.42□□□□□ -1.22
CACNA1A-203ENST00000573891 RPTORQ8N122 1335 aa7.42□□□□□ -1.22
CACNA1A-203ENST00000573891 COL6A3P12111 3177 aa7.42□□□□□ -1.22
CACNA1A-203ENST00000573891 LDHCP07864 332 aa7.41□□□□□ -1.22
CACNA1A-203ENST00000573891 DEKP35659 375 aaKnown RBP7.41□□□□□ -1.22
CACNA1A-203ENST00000573891 TRIM32Q13049 653 aa7.41□□□□□ -1.22
CACNA1A-203ENST00000573891 MAP3K21Q5TCX8 1036 aa7.41□□□□□ -1.22
CACNA1A-203ENST00000573891 GPR153Q6NV75 609 aa7.41□□□□□ -1.22
CACNA1A-203ENST00000573891 TBC1D9Q6ZT07 1266 aa7.41□□□□□ -1.22
CACNA1A-203ENST00000573891 METTL16Q86W50 562 aaKnown RBP7.41□□□□□ -1.22
CACNA1A-203ENST00000573891 ARHGAP45Q92619 1136 aa7.41□□□□□ -1.22
CACNA1A-203ENST00000573891 WDR18Q9BV38 432 aa7.41□□□□□ -1.22
CACNA1A-203ENST00000573891 NBPF3Q9H094 633 aa7.41□□□□□ -1.22
CACNA1A-203ENST00000573891 HMX1Q9NP08 348 aaPredicted RBP7.41□□□□□ -1.22
CACNA1A-203ENST00000573891 HERC5Q9UII4 1024 aaKnown RBP7.41□□□□□ -1.22
CACNA1A-203ENST00000573891 OGDHLQ9ULD0 1010 aa7.41□□□□□ -1.22
CACNA1A-203ENST00000573891 TTC28Q96AY4 2481 aa7.41□□□□□ -1.22
CACNA1A-203ENST00000573891 ALPK3Q96L96 1907 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 A0A0U1RQG5 324 aaPredicted RBP7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 PATL2C9JE40 543 aaKnown RBP7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 ASNSP08243 561 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 GNAI3P08754 354 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 XRCC5P13010 732 aaKnown RBP7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 HOXA7P31268 230 aaPredicted RBP7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 MCAMP43121 646 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 RARSP54136 660 aaKnown RBP7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 BACE1P56817 501 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 IRX3P78415 501 aaPredicted RBP7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 MTMR2Q13614 643 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 LRIT3Q3SXY7 679 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 TEX11Q8IYF3 940 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 C7orf61Q8IZ16 206 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 SLC17A8Q8NDX2 589 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 SH3RF3Q8TEJ3 882 aaPredicted RBP7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 SOCS4Q8WXH5 440 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 TRIB2Q92519 343 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 NEUROD6Q96NK8 337 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 DHX36Q9H2U1 1008 aaKnown RBP7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 DNAJC18Q9H819 358 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 AS3MTQ9HBK9 375 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 TXNRD2Q9NNW7 524 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 RAI14Q9P0K7 980 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 PI4KBQ9UBF8 816 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 ZMYND8Q9ULU4 1186 aaPredicted RBP7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 USTQ9Y2C2 406 aa7.4□□□□□ -1.22
CACNA1A-203ENST00000573891 PFASO15067 1338 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 DDX11L8A8MPP1 907 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 C19orf81C9J6K1 198 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 C3orf80F5H4A9 247 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 DLL1O00548 723 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 BRD1O95696 1058 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 UQCRFS1P1P0C7P4 283 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 COL6A1P12109 1028 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 NCLP19338 710 aaKnown RBP7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 MAGEA10P43363 369 aaPredicted RBP7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 PPP4CP60510 307 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 HERVK_113P62684 666 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 JAG1P78504 1218 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 KCNA1Q09470 495 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 GORABQ5T7V8 394 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 GPRC5AQ8NFJ5 357 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 USP6NLQ92738 828 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 P2RX7Q99572 595 aaKnown RBP7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 C11orf49Q9H6J7 331 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 GINM1Q9NU53 330 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 TMOD4Q9NZQ9 345 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 LRP2BPQ9P2M1 347 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 NAP1L2Q9ULW6 460 aaPredicted RBP7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 NDUFB9Q9Y6M9 179 aa7.39□□□□□ -1.23
CACNA1A-203ENST00000573891 SIPA1L1O43166 1804 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 FLT1P17948 1338 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 PNMA6EA0A0J9YXQ4 647 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 USP17L10C9JJH3 530 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 PEX10O60683 326 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 GPR37L1O60883 481 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 BAG3O95817 575 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 GNAI2P04899 355 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 SYN1P17600 705 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 CYP2B6P20813 491 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 MAPK4P31152 587 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 ERVK-9P63128 1117 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 ERVK-24P63145 666 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 SHROOM1Q2M3G4 852 aaPredicted RBP7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 FOXD4L5Q5VV16 416 aaPredicted RBP7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 NAA16Q6N069 864 aaPredicted RBP7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 POTEEQ6S8J3 1075 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 MAMSTRQ6ZN01 415 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 ADGRA1Q86SQ6 560 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 FOXP4Q8IVH2 680 aaPredicted RBP7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 MAPKAPK5Q8IW41 473 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 TRMT44Q8IYL2 757 aaKnown RBP7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 TDHQ8IZJ6 230 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 DEFB123Q8N688 67 aa7.38□□□□□ -1.23
CACNA1A-203ENST00000573891 FOXD4L4Q8WXT5 416 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms