RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 PHF20Q9BVI0 1012 aa12.16□□□□□ -0.46
CCDC40-207ENST00000572253 SEC31BQ9NQW1 1179 aa12.16□□□□□ -0.46
CCDC40-207ENST00000572253 GNL3LQ9NVN8 582 aaKnown RBP12.16□□□□□ -0.46
CCDC40-207ENST00000572253 TACC3Q9Y6A5 838 aa12.16□□□□□ -0.46
CCDC40-207ENST00000572253 MAGEB6P1A0A0J9YX57 407 aa12.16□□□□□ -0.46
CCDC40-207ENST00000572253 PPP1R3GB7ZBB8 358 aa12.16□□□□□ -0.46
CCDC40-207ENST00000572253 MAP2K7O14733 419 aa12.16□□□□□ -0.46
CCDC40-207ENST00000572253 APTXQ7Z2E3 356 aaKnown RBP12.16□□□□□ -0.46
CCDC40-207ENST00000572253 SMYD4Q8IYR2 804 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-207ENST00000572253 GOLGA5Q8TBA6 731 aa12.16□□□□□ -0.46
CCDC40-207ENST00000572253 LIMA1Q9UHB6 759 aaKnown RBP12.16□□□□□ -0.46
CCDC40-207ENST00000572253 ADAM21Q9UKJ8 722 aa12.16□□□□□ -0.46
CCDC40-207ENST00000572253 RAB21Q9UL25 225 aa12.16□□□□□ -0.46
CCDC40-207ENST00000572253 ECM29Q5VYK3 1845 aa12.16□□□□□ -0.46
CCDC40-207ENST00000572253 GTPBP6O43824 516 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-207ENST00000572253 RHOXF2BP0C7M4 288 aa12.16□□□□□ -0.46
CCDC40-207ENST00000572253 GOLGA6L1Q8N7Z2 621 aa12.16□□□□□ -0.46
CCDC40-207ENST00000572253 ZSCAN10Q96SZ4 725 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-207ENST00000572253 RHOXF2Q9BQY4 288 aa12.16□□□□□ -0.46
CCDC40-207ENST00000572253 VPS18Q9P253 973 aa12.16□□□□□ -0.46
CCDC40-207ENST00000572253 RWDD2AQ9UIY3 292 aa12.16□□□□□ -0.46
CCDC40-207ENST00000572253 GYPCP04921 128 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 USP5P45974 858 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 COPB1P53618 953 aaKnown RBP12.15□□□□□ -0.46
CCDC40-207ENST00000572253 KRT31Q15323 416 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 ACRBPQ8NEB7 543 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 CTCFLQ8NI51 663 aaPredicted RBP12.15□□□□□ -0.46
CCDC40-207ENST00000572253 TRERF1Q96PN7 1200 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 VPS16Q9H269 839 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 PDE11AQ9HCR9 933 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 FAM205CA6NFA0 338 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 MCM3P25205 808 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 CASP1P29466 404 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 BCAMP50895 628 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 CCDC152Q4G0S7 254 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 ANKZF1Q9H8Y5 726 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 ABCF2Q9UG63 623 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 ZBTB1Q9Y2K1 713 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 A0A087X0B3 334 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 CYP19A1P11511 503 aaPredicted RBP12.15□□□□□ -0.46
CCDC40-207ENST00000572253 KRT9P35527 623 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 FXR1P51114 621 aaKnown RBP eCLIP12.15□□□□□ -0.46
CCDC40-207ENST00000572253 PTGDRQ13258 359 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 BEND6Q5SZJ8 279 aaPredicted RBP12.15□□□□□ -0.46
CCDC40-207ENST00000572253 CCDC102AQ96A19 550 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 TAB2Q9NYJ8 693 aa12.15□□□□□ -0.46
CCDC40-207ENST00000572253 PRDM1O75626 825 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 IVLP07476 585 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 SEC23AQ15436 765 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 MSL3Q8N5Y2 521 aaKnown RBP12.14□□□□□ -0.47
CCDC40-207ENST00000572253 CDC5LQ99459 802 aaKnown RBP12.14□□□□□ -0.47
CCDC40-207ENST00000572253 ABHD10Q9NUJ1 306 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 TIAM2Q8IVF5 1701 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 KCNJ18B7U540 433 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 PES1O00541 588 aaKnown RBP12.14□□□□□ -0.47
CCDC40-207ENST00000572253 IPO7O95373 1038 aaKnown RBP12.14□□□□□ -0.47
CCDC40-207ENST00000572253 PCP11498 1178 aaKnown RBP12.14□□□□□ -0.47
CCDC40-207ENST00000572253 FECHP22830 423 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 TRAPPC10P48553 1259 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 NLRP5P59047 1200 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 STIM1Q13586 685 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 KCNJ12Q14500 433 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 RASSF8Q8NHQ8 419 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 NELFBQ8WX92 580 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 STAMQ92783 540 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 ABCB6Q9NP58 842 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 ANAPC4Q9UJX5 808 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 TULP2O00295 520 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 DDAH1O94760 285 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 IL6STP40189 918 aaPredicted RBP12.14□□□□□ -0.47
CCDC40-207ENST00000572253 ATP2C1P98194 919 aaPredicted RBP12.14□□□□□ -0.47
CCDC40-207ENST00000572253 RAD51AP2Q09MP3 1159 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 MAP9Q49MG5 647 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 SLF1Q9BQI6 1058 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 BLZF1Q9H2G9 400 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 MYO6Q9UM54 1294 aa12.14□□□□□ -0.47
CCDC40-207ENST00000572253 hCG_1642624A0A1W2PR95 340 aa12.13□□□□□ -0.47
CCDC40-207ENST00000572253 UBXN1Q04323 297 aa12.13□□□□□ -0.47
CCDC40-207ENST00000572253 ENAHQ8N8S7 591 aaPredicted RBP12.13□□□□□ -0.47
CCDC40-207ENST00000572253 SDR42E1Q8WUS8 393 aa12.13□□□□□ -0.47
CCDC40-207ENST00000572253 MAGEC2Q9UBF1 373 aaPredicted RBP12.13□□□□□ -0.47
CCDC40-207ENST00000572253 CHD4Q14839 1912 aa12.13□□□□□ -0.47
CCDC40-207ENST00000572253 H3BQF6 201 aa12.13□□□□□ -0.47
CCDC40-207ENST00000572253 ACTN2P35609 894 aa12.13□□□□□ -0.47
CCDC40-207ENST00000572253 PKN1Q16512 942 aa12.13□□□□□ -0.47
CCDC40-207ENST00000572253 ZNF658Q5TYW1 1059 aaPredicted RBP12.13□□□□□ -0.47
CCDC40-207ENST00000572253 EHBP1Q8NDI1 1231 aa12.13□□□□□ -0.47
CCDC40-207ENST00000572253 LRRC10BA6NIK2 292 aa12.13□□□□□ -0.47
CCDC40-207ENST00000572253 SNAP23O00161 211 aa12.13□□□□□ -0.47
CCDC40-207ENST00000572253 CAPN2P17655 700 aa12.13□□□□□ -0.47
CCDC40-207ENST00000572253 TCP11X2Q5H9J9 407 aa12.13□□□□□ -0.47
CCDC40-207ENST00000572253 ZNF34Q8IZ26 560 aa12.13□□□□□ -0.47
CCDC40-207ENST00000572253 PNKPQ96T60 521 aa12.13□□□□□ -0.47
CCDC40-207ENST00000572253 H7C1D1 291 aa12.12□□□□□ -0.47
CCDC40-207ENST00000572253 PLEKHA8P1O95397 391 aa12.12□□□□□ -0.47
CCDC40-207ENST00000572253 GYS2P54840 703 aa12.12□□□□□ -0.47
CCDC40-207ENST00000572253 FAM71BQ8TC56 605 aa12.12□□□□□ -0.47
CCDC40-207ENST00000572253 BBXQ8WY36 941 aaPredicted RBP12.12□□□□□ -0.47
CCDC40-207ENST00000572253 L1RE1Q9UN81 338 aa12.12□□□□□ -0.47
CCDC40-207ENST00000572253 IQSEC3Q9UPP2 1182 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms