RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 NECAB2Q7Z6G3 386 aa11.68□□□□□ -0.54
CIITA-207ENST00000571545 ACER1Q8TDN7 264 aa11.68□□□□□ -0.54
CIITA-207ENST00000571545 TRIB2Q92519 343 aa11.68□□□□□ -0.54
CIITA-207ENST00000571545 KANSL2Q9H9L4 492 aa11.68□□□□□ -0.54
CIITA-207ENST00000571545 GOPCQ9HD26 462 aa11.68□□□□□ -0.54
CIITA-207ENST00000571545 SLC5A4Q9NY91 659 aa11.68□□□□□ -0.54
CIITA-207ENST00000571545 SPDYE16A6NNV3 312 aaPredicted RBP11.67□□□□□ -0.54
CIITA-207ENST00000571545 USP17L12C9JPN9 530 aa11.67□□□□□ -0.54
CIITA-207ENST00000571545 USP17L21D6R901 530 aa11.67□□□□□ -0.54
CIITA-207ENST00000571545 WDR46O15213 610 aaKnown RBP11.67□□□□□ -0.54
CIITA-207ENST00000571545 STRNO43815 780 aa11.67□□□□□ -0.54
CIITA-207ENST00000571545 SMARCA5O60264 1052 aaPredicted RBP11.67□□□□□ -0.54
CIITA-207ENST00000571545 MSCO60682 206 aa11.67□□□□□ -0.54
CIITA-207ENST00000571545 CYP2B6P20813 491 aa11.67□□□□□ -0.54
CIITA-207ENST00000571545 CDK8P49336 464 aa11.67□□□□□ -0.54
CIITA-207ENST00000571545 MAP2K5Q13163 448 aa11.67□□□□□ -0.54
CIITA-207ENST00000571545 SBK1Q52WX2 424 aa11.67□□□□□ -0.54
CIITA-207ENST00000571545 HABP4Q5JVS0 413 aaKnown RBP11.67□□□□□ -0.54
CIITA-207ENST00000571545 MORN1Q5T089 497 aa11.67□□□□□ -0.54
CIITA-207ENST00000571545 MAP3K21Q5TCX8 1036 aa11.67□□□□□ -0.54
CIITA-207ENST00000571545 WDR78Q5VTH9 848 aa11.67□□□□□ -0.54
CIITA-207ENST00000571545 MFSD14CQ5VZR4 134 aa11.67□□□□□ -0.54
CIITA-207ENST00000571545 SHCBP1Q8NEM2 672 aa11.67□□□□□ -0.54
CIITA-207ENST00000571545 NACAP1Q9BZK3 213 aa11.67□□□□□ -0.54
CIITA-207ENST00000571545 PUS7LQ9H0K6 701 aaKnown RBP11.67□□□□□ -0.54
CIITA-207ENST00000571545 TMX2Q9Y320 296 aa11.67□□□□□ -0.54
CIITA-207ENST00000571545 ROBO3Q96MS0 1386 aa11.67□□□□□ -0.54
CIITA-207ENST00000571545 BRCA2P51587 3418 aa11.66□□□□□ -0.54
CIITA-207ENST00000571545 RNF113AO15541 343 aaKnown RBP11.66□□□□□ -0.54
CIITA-207ENST00000571545 PRKAB2O43741 272 aa11.66□□□□□ -0.54
CIITA-207ENST00000571545 EVI5O60447 810 aa11.66□□□□□ -0.54
CIITA-207ENST00000571545 CYP2D6P10635 497 aa11.66□□□□□ -0.54
CIITA-207ENST00000571545 PRKAR2AP13861 404 aaKnown RBP11.66□□□□□ -0.54
CIITA-207ENST00000571545 COPB2P35606 906 aa11.66□□□□□ -0.54
CIITA-207ENST00000571545 CTR9Q6PD62 1173 aa11.66□□□□□ -0.54
CIITA-207ENST00000571545 POTEHQ6S545 545 aa11.66□□□□□ -0.54
CIITA-207ENST00000571545 SLC44A5Q8NCS7 719 aa11.66□□□□□ -0.54
CIITA-207ENST00000571545 USP6NLQ92738 828 aa11.66□□□□□ -0.54
CIITA-207ENST00000571545 STRBPQ96SI9 672 aaKnown RBP11.66□□□□□ -0.54
CIITA-207ENST00000571545 NBPF3Q9H094 633 aa11.66□□□□□ -0.54
CIITA-207ENST00000571545 PORCNQ9H237 461 aa11.66□□□□□ -0.54
CIITA-207ENST00000571545 VCPKMTQ9H867 229 aa11.66□□□□□ -0.54
CIITA-207ENST00000571545 MKI67P46013 3256 aaKnown RBP11.66□□□□□ -0.54
CIITA-207ENST00000571545 CEP290O15078 2479 aa11.66□□□□□ -0.54
CIITA-207ENST00000571545 GREB1LQ9C091 1923 aaPredicted RBP11.66□□□□□ -0.54
CIITA-207ENST00000571545 PARP14Q460N5 1801 aa11.65□□□□□ -0.54
CIITA-207ENST00000571545 H0YGN5 161 aa11.65□□□□□ -0.54
CIITA-207ENST00000571545 FLOT1O75955 427 aa11.65□□□□□ -0.54
CIITA-207ENST00000571545 SLC3A2P08195 630 aaKnown RBP11.65□□□□□ -0.54
CIITA-207ENST00000571545 HOXC6P09630 235 aa11.65□□□□□ -0.54
CIITA-207ENST00000571545 AKR1B1P15121 316 aa11.65□□□□□ -0.54
CIITA-207ENST00000571545 MX1P20591 662 aa11.65□□□□□ -0.54
CIITA-207ENST00000571545 PTPREP23469 700 aa11.65□□□□□ -0.54
CIITA-207ENST00000571545 TDO2P48775 406 aa11.65□□□□□ -0.54
CIITA-207ENST00000571545 GRB14Q14449 540 aa11.65□□□□□ -0.54
CIITA-207ENST00000571545 Q3C1V9 767 aa11.65□□□□□ -0.54
CIITA-207ENST00000571545 PPP4R3BQ5MIZ7 849 aa11.65□□□□□ -0.54
CIITA-207ENST00000571545 DYNLL2Q96FJ2 89 aa11.65□□□□□ -0.54
CIITA-207ENST00000571545 MROH8Q9H579 483 aa11.65□□□□□ -0.54
CIITA-207ENST00000571545 MKNK2Q9HBH9 465 aa11.65□□□□□ -0.54
CIITA-207ENST00000571545 OGDHLQ9ULD0 1010 aa11.65□□□□□ -0.54
CIITA-207ENST00000571545 SYNPO2Q9UMS6 1093 aa11.65□□□□□ -0.54
CIITA-207ENST00000571545 RLFQ13129 1914 aa11.64□□□□□ -0.55
CIITA-207ENST00000571545 A0A1W2PRG0 241 aa11.64□□□□□ -0.55
CIITA-207ENST00000571545 GPAA1O43292 621 aa11.64□□□□□ -0.55
CIITA-207ENST00000571545 CNMDO75829 334 aa11.64□□□□□ -0.55
CIITA-207ENST00000571545 SLC25A27O95847 323 aa11.64□□□□□ -0.55
CIITA-207ENST00000571545 TICAM2Q86XR7 235 aa11.64□□□□□ -0.55
CIITA-207ENST00000571545 ABRAQ8N0Z2 381 aa11.64□□□□□ -0.55
CIITA-207ENST00000571545 FSD1Q9BTV5 496 aa11.64□□□□□ -0.55
CIITA-207ENST00000571545 SPATC1LQ9H0A9 340 aa11.64□□□□□ -0.55
CIITA-207ENST00000571545 BTBD7Q9P203 1132 aa11.64□□□□□ -0.55
CIITA-207ENST00000571545 FRMPD3Q5JV73 1810 aa11.64□□□□□ -0.55
CIITA-207ENST00000571545 A0A1W2PPC1 479 aa11.63□□□□□ -0.55
CIITA-207ENST00000571545 GSG1L2A8MUP6 293 aa11.63□□□□□ -0.55
CIITA-207ENST00000571545 APPP05067 770 aa11.63□□□□□ -0.55
CIITA-207ENST00000571545 ATP2B2Q01814 1243 aa11.63□□□□□ -0.55
CIITA-207ENST00000571545 PDE4BQ07343 736 aa11.63□□□□□ -0.55
CIITA-207ENST00000571545 CACNB2Q08289 660 aaPredicted RBP11.63□□□□□ -0.55
CIITA-207ENST00000571545 OLFML2BQ68BL8 750 aa11.63□□□□□ -0.55
CIITA-207ENST00000571545 DPP9Q86TI2 863 aa11.63□□□□□ -0.55
CIITA-207ENST00000571545 OSBP2Q969R2 916 aa11.63□□□□□ -0.55
CIITA-207ENST00000571545 PAWRQ96IZ0 340 aaKnown RBP11.63□□□□□ -0.55
CIITA-207ENST00000571545 MOV10L1Q9BXT6 1211 aaKnown RBP11.63□□□□□ -0.55
CIITA-207ENST00000571545 C11orf49Q9H6J7 331 aa11.63□□□□□ -0.55
CIITA-207ENST00000571545 NYAP2Q9P242 653 aa11.63□□□□□ -0.55
CIITA-207ENST00000571545 MYH4Q9Y623 1939 aa11.62□□□□□ -0.55
CIITA-207ENST00000571545 CYP2D7A0A087X1C5 515 aa11.62□□□□□ -0.55
CIITA-207ENST00000571545 MINDY4BA8MYZ0 360 aa11.62□□□□□ -0.55
CIITA-207ENST00000571545 PATL2C9JE40 543 aaKnown RBP11.62□□□□□ -0.55
CIITA-207ENST00000571545 EEF2P13639 858 aaKnown RBP11.62□□□□□ -0.55
CIITA-207ENST00000571545 HDAC1Q13547 482 aaPredicted RBP11.62□□□□□ -0.55
CIITA-207ENST00000571545 PLS1Q14651 629 aa11.62□□□□□ -0.55
CIITA-207ENST00000571545 SLFNL1Q499Z3 407 aa11.62□□□□□ -0.55
CIITA-207ENST00000571545 CHRDL2Q6WN34 429 aa11.62□□□□□ -0.55
CIITA-207ENST00000571545 ZNF444Q8N0Y2 327 aaPredicted RBP11.62□□□□□ -0.55
CIITA-207ENST00000571545 SPICE1Q8N0Z3 855 aa11.62□□□□□ -0.55
CIITA-207ENST00000571545 PI4K2BQ8TCG2 481 aa11.62□□□□□ -0.55
CIITA-207ENST00000571545 NAPBQ9H115 298 aa11.62□□□□□ -0.55
CIITA-207ENST00000571545 COLQQ9Y215 455 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms