RNA–Protein interactions for RNA: ENST00000571538.5

TRAP1-206, Transcript of TNF receptor associated protein 1, humanhuman

TSL 4

Gene TRAP1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-206ENST00000571538 IGF2BP3O00425 579 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRAP1-206ENST00000571538 WDR46O15213 610 aaKnown RBP11.8□□□□□ -0.52
TRAP1-206ENST00000571538 KDM4AO75164 1064 aa11.8□□□□□ -0.52
TRAP1-206ENST00000571538 HMGB1P09429 215 aaKnown RBP11.8□□□□□ -0.52
TRAP1-206ENST00000571538 HOXA7P31268 230 aaPredicted RBP11.8□□□□□ -0.52
TRAP1-206ENST00000571538 IRX3P78415 501 aaPredicted RBP11.8□□□□□ -0.52
TRAP1-206ENST00000571538 TAF1CQ15572 869 aaPredicted RBP11.8□□□□□ -0.52
TRAP1-206ENST00000571538 TSGA10IPQ3SY00 556 aa11.8□□□□□ -0.52
TRAP1-206ENST00000571538 NOM1Q5C9Z4 860 aaKnown RBP11.8□□□□□ -0.52
TRAP1-206ENST00000571538 DGKHQ86XP1 1220 aa11.8□□□□□ -0.52
TRAP1-206ENST00000571538 PTPN18Q99952 460 aa11.8□□□□□ -0.52
TRAP1-206ENST00000571538 RNF186Q9NXI6 227 aa11.8□□□□□ -0.52
TRAP1-206ENST00000571538 CLIP2Q9UDT6 1046 aa11.8□□□□□ -0.52
TRAP1-206ENST00000571538 PHIPQ8WWQ0 1821 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 PCNTO95613 3336 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 USP17L15C9J2P7 530 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 USP17L13C9JLJ4 530 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 USP17L11C9JVI0 530 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 USP17L18D6R9N7 530 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 USP17L22D6RA61 530 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 USP17L17D6RBQ6 530 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 USP17L19D6RCP7 530 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 USP17L20D6RJB6 530 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 TRPA1O75762 1119 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 TOP1P11387 765 aaKnown RBP11.79□□□□□ -0.52
TRAP1-206ENST00000571538 VCAM1P19320 739 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 MCM5P33992 734 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 HSPA4P34932 840 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 NOVP48745 357 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 CTCFP49711 727 aaPredicted RBP11.79□□□□□ -0.52
TRAP1-206ENST00000571538 USP17L24Q0WX57 530 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 MOGSQ13724 837 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 FAM43AQ8N2R8 423 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 GMCL1P1Q8NEA9 526 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 ACER1Q8TDN7 264 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 SMCR8Q8TEV9 937 aaPredicted RBP11.79□□□□□ -0.52
TRAP1-206ENST00000571538 ZSCAN10Q96SZ4 725 aaPredicted RBP11.79□□□□□ -0.52
TRAP1-206ENST00000571538 INCENPQ9NQS7 918 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 EMILIN3Q9NT22 766 aa11.79□□□□□ -0.52
TRAP1-206ENST00000571538 GREB1LQ9C091 1923 aaPredicted RBP11.79□□□□□ -0.52
TRAP1-206ENST00000571538 A0A1W2PRG0 241 aa11.78□□□□□ -0.52
TRAP1-206ENST00000571538 HSPA1AP0DMV8 641 aaKnown RBP11.78□□□□□ -0.52
TRAP1-206ENST00000571538 HSPA1BP0DMV9 641 aaKnown RBP11.78□□□□□ -0.52
TRAP1-206ENST00000571538 PSMA5P28066 241 aa11.78□□□□□ -0.52
TRAP1-206ENST00000571538 GCLCP48506 637 aaPredicted RBP11.78□□□□□ -0.52
TRAP1-206ENST00000571538 ZYXQ15942 572 aaKnown RBP11.78□□□□□ -0.52
TRAP1-206ENST00000571538 GPAT2Q6NUI2 795 aa11.78□□□□□ -0.52
TRAP1-206ENST00000571538 SIAH1Q8IUQ4 282 aa11.78□□□□□ -0.52
TRAP1-206ENST00000571538 ANKS1AQ92625 1134 aa11.78□□□□□ -0.52
TRAP1-206ENST00000571538 USP26Q9BXU7 913 aa11.78□□□□□ -0.52
TRAP1-206ENST00000571538 IL17RBQ9NRM6 502 aa11.78□□□□□ -0.52
TRAP1-206ENST00000571538 ZSWIM5Q9P217 1185 aa11.78□□□□□ -0.52
TRAP1-206ENST00000571538 MYPNQ86TC9 1320 aa11.78□□□□□ -0.52
TRAP1-206ENST00000571538 LOC285556D6RIA3 1793 aa11.77□□□□□ -0.52
TRAP1-206ENST00000571538 F5H6K3 240 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 RAD21O60216 631 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 TLR2O60603 784 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 KLRC3Q07444 240 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 CRHR2Q13324 411 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 ARHGEF6Q15052 776 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 TREML2Q5T2D2 321 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 IFIT1BQ5T764 474 aaKnown RBP11.77□□□□□ -0.53
TRAP1-206ENST00000571538 RCSD1Q6JBY9 416 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 CLEC10AQ8IUN9 316 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 TMTC2Q8N394 836 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 KCNB2Q92953 911 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 TMEM87BQ96K49 555 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 NEK1Q96PY6 1258 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 TANGO6Q9C0B7 1094 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 RPAP3Q9H6T3 665 aaPredicted RBP11.77□□□□□ -0.53
TRAP1-206ENST00000571538 KAT14Q9H8E8 782 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 UPF2Q9HAU5 1272 aaKnown RBP11.77□□□□□ -0.53
TRAP1-206ENST00000571538 HOXC10Q9NYD6 342 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 TACC3Q9Y6A5 838 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 TNKSO95271 1327 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 WDR19Q8NEZ3 1342 aa11.77□□□□□ -0.53
TRAP1-206ENST00000571538 PTPRFP10586 1907 aa11.76□□□□□ -0.53
TRAP1-206ENST00000571538 IFIT3O14879 490 aaKnown RBP11.76□□□□□ -0.53
TRAP1-206ENST00000571538 NDUFB10O96000 172 aa11.76□□□□□ -0.53
TRAP1-206ENST00000571538 SLC1A4P43007 532 aa11.76□□□□□ -0.53
TRAP1-206ENST00000571538 ANAPC15P60006 121 aa11.76□□□□□ -0.53
TRAP1-206ENST00000571538 SLFN13Q68D06 897 aa11.76□□□□□ -0.53
TRAP1-206ENST00000571538 CATSPERGQ6ZRH7 1159 aa11.76□□□□□ -0.53
TRAP1-206ENST00000571538 STOX1Q6ZVD7 989 aa11.76□□□□□ -0.53
TRAP1-206ENST00000571538 MB21D2Q8IYB1 491 aaPredicted RBP11.76□□□□□ -0.53
TRAP1-206ENST00000571538 LRRC47Q8N1G4 583 aaKnown RBP11.76□□□□□ -0.53
TRAP1-206ENST00000571538 MB21D1Q8N884 522 aa11.76□□□□□ -0.53
TRAP1-206ENST00000571538 DCAF4Q8WV16 495 aa11.76□□□□□ -0.53
TRAP1-206ENST00000571538 GMCL1Q96IK5 515 aa11.76□□□□□ -0.53
TRAP1-206ENST00000571538 ASCC2Q9H1I8 757 aaPredicted RBP11.76□□□□□ -0.53
TRAP1-206ENST00000571538 NMT2O60551 498 aa11.75□□□□□ -0.53
TRAP1-206ENST00000571538 FLOT1O75955 427 aa11.75□□□□□ -0.53
TRAP1-206ENST00000571538 FDX1P10109 184 aa11.75□□□□□ -0.53
TRAP1-206ENST00000571538 BMP3P12645 472 aa11.75□□□□□ -0.53
TRAP1-206ENST00000571538 COG2Q14746 738 aa11.75□□□□□ -0.53
TRAP1-206ENST00000571538 KIF22Q14807 665 aa11.75□□□□□ -0.53
TRAP1-206ENST00000571538 WTAPQ15007 396 aa11.75□□□□□ -0.53
TRAP1-206ENST00000571538 C8orf34Q49A92 452 aa11.75□□□□□ -0.53
TRAP1-206ENST00000571538 TMEM67Q5HYA8 995 aa11.75□□□□□ -0.53
TRAP1-206ENST00000571538 IFFO2Q5TF58 517 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms