RNA–Protein interactions for RNA: ENST00000570279.1

CFDP1-210, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-210ENST00000570279 TTC21BQ7Z4L5 1316 aa5□□□□□ -1.61
CFDP1-210ENST00000570279 SSH2Q76I76 1423 aa5□□□□□ -1.61
CFDP1-210ENST00000570279 EIF4EBP3O60516 100 aaPredicted RBP5□□□□□ -1.61
CFDP1-210ENST00000570279 BAG4O95429 457 aaKnown RBP5□□□□□ -1.61
CFDP1-210ENST00000570279 MCCP23508 829 aa5□□□□□ -1.61
CFDP1-210ENST00000570279 ITPKAP23677 461 aa5□□□□□ -1.61
CFDP1-210ENST00000570279 MAPK8P45983 427 aa5□□□□□ -1.61
CFDP1-210ENST00000570279 NASPP49321 788 aaPredicted RBP5□□□□□ -1.61
CFDP1-210ENST00000570279 FMR1Q06787 632 aaKnown RBP eCLIP5□□□□□ -1.61
CFDP1-210ENST00000570279 ZNF423Q2M1K9 1284 aa5□□□□□ -1.61
CFDP1-210ENST00000570279 UVSSAQ2YD98 709 aa5□□□□□ -1.61
CFDP1-210ENST00000570279 ANKRD34AQ69YU3 496 aa5□□□□□ -1.61
CFDP1-210ENST00000570279 PI16Q6UXB8 463 aa5□□□□□ -1.61
CFDP1-210ENST00000570279 PDZRN4Q6ZMN7 1036 aaPredicted RBP5□□□□□ -1.61
CFDP1-210ENST00000570279 PRR23CQ6ZRP0 262 aa5□□□□□ -1.61
CFDP1-210ENST00000570279 SND1Q7KZF4 910 aaKnown RBP eCLIP5□□□□□ -1.61
CFDP1-210ENST00000570279 SYAP1Q96A49 352 aaPredicted RBP5□□□□□ -1.61
CFDP1-210ENST00000570279 UBL7Q96S82 380 aaPredicted RBP5□□□□□ -1.61
CFDP1-210ENST00000570279 GZF1Q9H116 711 aaPredicted RBP5□□□□□ -1.61
CFDP1-210ENST00000570279 DDX49Q9Y6V7 483 aaKnown RBP5□□□□□ -1.61
CFDP1-210ENST00000570279 LRRC7Q96NW7 1537 aa5□□□□□ -1.61
CFDP1-210ENST00000570279 RTL1A6NKG5 1358 aa5□□□□□ -1.61
CFDP1-210ENST00000570279 RIMS2Q9UQ26 1411 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 LOC100289279A0A1B0GTE1 492 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 TMEM238LA0A1B0GVL6 79 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 ERC2O15083 957 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 ZNF500O60304 480 aaPredicted RBP4.99□□□□□ -1.61
CFDP1-210ENST00000570279 OFD1O75665 1012 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 LETM1O95202 739 aaPredicted RBP4.99□□□□□ -1.61
CFDP1-210ENST00000570279 RAPGEF3O95398 923 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 B3GALT4O96024 378 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 GNAI3P08754 354 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 MSNP26038 577 aaKnown RBP4.99□□□□□ -1.61
CFDP1-210ENST00000570279 PTPN12Q05209 780 aaKnown RBP4.99□□□□□ -1.61
CFDP1-210ENST00000570279 HSP90AA2PQ14568 343 aaPredicted RBP4.99□□□□□ -1.61
CFDP1-210ENST00000570279 PRSS36Q5K4E3 855 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 CEP85Q6P2H3 762 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 FDX2Q6P4F2 183 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 FAM184AQ8NB25 1140 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 DDX54Q8TDD1 881 aaKnown RBP4.99□□□□□ -1.61
CFDP1-210ENST00000570279 UTP4Q969X6 686 aaKnown RBP4.99□□□□□ -1.61
CFDP1-210ENST00000570279 PDLIM2Q96JY6 352 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 PHACTR3Q96KR7 559 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 NAP1L5Q96NT1 182 aaPredicted RBP4.99□□□□□ -1.61
CFDP1-210ENST00000570279 PANK2Q9BZ23 570 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 NRSN2Q9GZP1 204 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 PDCL3Q9H2J4 239 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 NOL7Q9UMY1 257 aaKnown RBP4.99□□□□□ -1.61
CFDP1-210ENST00000570279 ANKRD26Q9UPS8 1709 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 A2ML1A8K2U0 1454 aa4.99□□□□□ -1.61
CFDP1-210ENST00000570279 MEGF11A6BM72 1044 aa4.98□□□□□ -1.61
CFDP1-210ENST00000570279 SART1O43290 800 aaKnown RBP4.98□□□□□ -1.61
CFDP1-210ENST00000570279 GSPT1P15170 499 aaKnown RBP4.98□□□□□ -1.61
CFDP1-210ENST00000570279 PREPP48147 710 aa4.98□□□□□ -1.61
CFDP1-210ENST00000570279 FCGRTP55899 365 aa4.98□□□□□ -1.61
CFDP1-210ENST00000570279 CUL4AQ13619 759 aa4.98□□□□□ -1.61
CFDP1-210ENST00000570279 SAFB2Q14151 953 aaKnown RBP eCLIP4.98□□□□□ -1.61
CFDP1-210ENST00000570279 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.98□□□□□ -1.61
CFDP1-210ENST00000570279 NUTM2GQ5VZR2 741 aa4.98□□□□□ -1.61
CFDP1-210ENST00000570279 DTHD1Q6ZMT9 781 aa4.98□□□□□ -1.61
CFDP1-210ENST00000570279 GAS2L3Q86XJ1 694 aa4.98□□□□□ -1.61
CFDP1-210ENST00000570279 ARMC10Q8N2F6 343 aa4.98□□□□□ -1.61
CFDP1-210ENST00000570279 TSPYL6Q8N831 410 aa4.98□□□□□ -1.61
CFDP1-210ENST00000570279 C8orf58Q8NAV2 365 aa4.98□□□□□ -1.61
CFDP1-210ENST00000570279 FBF1Q8TES7 1133 aa4.98□□□□□ -1.61
CFDP1-210ENST00000570279 FAM46AQ96IP4 442 aaKnown RBP4.98□□□□□ -1.61
CFDP1-210ENST00000570279 TMPRSS13Q9BYE2 586 aa4.98□□□□□ -1.61
CFDP1-210ENST00000570279 BCO2Q9BYV7 579 aa4.98□□□□□ -1.61
CFDP1-210ENST00000570279 CCDC39Q9UFE4 941 aa4.98□□□□□ -1.61
CFDP1-210ENST00000570279 HDAC5Q9UQL6 1122 aa4.98□□□□□ -1.61
CFDP1-210ENST00000570279 SPATA31D1Q6ZQQ2 1576 aa4.98□□□□□ -1.61
CFDP1-210ENST00000570279 TTC21AQ8NDW8 1320 aa4.97□□□□□ -1.61
CFDP1-210ENST00000570279 ATP10DQ9P241 1426 aa4.97□□□□□ -1.61
CFDP1-210ENST00000570279 USP31Q70CQ4 1352 aa4.97□□□□□ -1.61
CFDP1-210ENST00000570279 DHX15O43143 795 aaKnown RBP4.97□□□□□ -1.61
CFDP1-210ENST00000570279 DLGAP3O95886 979 aa4.97□□□□□ -1.61
CFDP1-210ENST00000570279 CYP11A1P05108 521 aa4.97□□□□□ -1.61
CFDP1-210ENST00000570279 P4HBP07237 508 aaKnown RBP4.97□□□□□ -1.61
CFDP1-210ENST00000570279 NCLP19338 710 aaKnown RBP4.97□□□□□ -1.61
CFDP1-210ENST00000570279 SDSP20132 328 aa4.97□□□□□ -1.61
CFDP1-210ENST00000570279 ATP2B2Q01814 1243 aa4.97□□□□□ -1.61
CFDP1-210ENST00000570279 POU4F3Q15319 338 aa4.97□□□□□ -1.61
CFDP1-210ENST00000570279 ZSCAN23Q3MJ62 389 aa4.97□□□□□ -1.61
CFDP1-210ENST00000570279 RPS26P11Q5JNZ5 115 aaPredicted RBP4.97□□□□□ -1.61
CFDP1-210ENST00000570279 ALG1LQ6GMV1 187 aa4.97□□□□□ -1.61
CFDP1-210ENST00000570279 LRSAM1Q6UWE0 723 aa4.97□□□□□ -1.61
CFDP1-210ENST00000570279 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.97□□□□□ -1.61
CFDP1-210ENST00000570279 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.97□□□□□ -1.61
CFDP1-210ENST00000570279 MYRFLQ96LU7 910 aa4.97□□□□□ -1.61
CFDP1-210ENST00000570279 SETDB2Q96T68 719 aa4.97□□□□□ -1.61
CFDP1-210ENST00000570279 CORO1BQ9BR76 489 aa4.97□□□□□ -1.61
CFDP1-210ENST00000570279 TRIM56Q9BRZ2 755 aaKnown RBP4.97□□□□□ -1.61
CFDP1-210ENST00000570279 CYP4F12Q9HCS2 524 aa4.97□□□□□ -1.61
CFDP1-210ENST00000570279 LMBRD1Q9NUN5 540 aa4.97□□□□□ -1.61
CFDP1-210ENST00000570279 STAP2Q9UGK3 403 aa4.97□□□□□ -1.61
CFDP1-210ENST00000570279 ATP6V1DQ9Y5K8 247 aa4.97□□□□□ -1.61
CFDP1-210ENST00000570279 RAB11FIP3O75154 756 aa4.96□□□□□ -1.62
CFDP1-210ENST00000570279 GNAI2P04899 355 aa4.96□□□□□ -1.62
CFDP1-210ENST00000570279 TPM3P06753 285 aa4.96□□□□□ -1.62
CFDP1-210ENST00000570279 HMOX1P09601 288 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms