RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 USP17L13C9JLJ4 530 aa14.01□□□□□ -0.17
CDH3-208ENST00000569036 USP17L11C9JVI0 530 aa14.01□□□□□ -0.17
CDH3-208ENST00000569036 USP17L18D6R9N7 530 aa14.01□□□□□ -0.17
CDH3-208ENST00000569036 USP17L22D6RA61 530 aa14.01□□□□□ -0.17
CDH3-208ENST00000569036 USP17L17D6RBQ6 530 aa14.01□□□□□ -0.17
CDH3-208ENST00000569036 USP17L19D6RCP7 530 aa14.01□□□□□ -0.17
CDH3-208ENST00000569036 USP17L20D6RJB6 530 aa14.01□□□□□ -0.17
CDH3-208ENST00000569036 FGBP02675 491 aa14.01□□□□□ -0.17
CDH3-208ENST00000569036 ACLYP53396 1101 aa14.01□□□□□ -0.17
CDH3-208ENST00000569036 USP17L24Q0WX57 530 aa14.01□□□□□ -0.17
CDH3-208ENST00000569036 RABL6Q3YEC7 729 aaPredicted RBP14.01□□□□□ -0.17
CDH3-208ENST00000569036 LBX2Q6XYB7 198 aa14.01□□□□□ -0.17
CDH3-208ENST00000569036 SLF2Q8IX21 1173 aa14.01□□□□□ -0.17
CDH3-208ENST00000569036 BICC1Q9H694 974 aaKnown RBP14.01□□□□□ -0.17
CDH3-208ENST00000569036 DENND2AQ9ULE3 1009 aa14.01□□□□□ -0.17
CDH3-208ENST00000569036 ZFHX2Q9C0A1 2572 aaPredicted RBP14.01□□□□□ -0.17
CDH3-208ENST00000569036 COL4A4P53420 1690 aaPredicted RBP14.01□□□□□ -0.17
CDH3-208ENST00000569036 MROH7Q68CQ1 1323 aa14□□□□□ -0.17
CDH3-208ENST00000569036 GPR75-ASB3A0A0A6YYF3 556 aa14□□□□□ -0.17
CDH3-208ENST00000569036 APAF1O14727 1248 aa14□□□□□ -0.17
CDH3-208ENST00000569036 SSTR3P32745 418 aaPredicted RBP14□□□□□ -0.17
CDH3-208ENST00000569036 OTOP2Q7RTS6 562 aa14□□□□□ -0.17
CDH3-208ENST00000569036 ZGPATQ8N5A5 531 aaKnown RBP14□□□□□ -0.17
CDH3-208ENST00000569036 ANKRD44Q8N8A2 993 aa14□□□□□ -0.17
CDH3-208ENST00000569036 NUP133Q8WUM0 1156 aa14□□□□□ -0.17
CDH3-208ENST00000569036 LENG1Q96BZ8 264 aaPredicted RBP14□□□□□ -0.17
CDH3-208ENST00000569036 C12orf42Q96LP6 360 aa14□□□□□ -0.17
CDH3-208ENST00000569036 TSEN34Q9BSV6 310 aaKnown RBP14□□□□□ -0.17
CDH3-208ENST00000569036 CERS4Q9HA82 394 aa14□□□□□ -0.17
CDH3-208ENST00000569036 GNL3LQ9NVN8 582 aaKnown RBP14□□□□□ -0.17
CDH3-208ENST00000569036 ZBTB21Q9ULJ3 1066 aa14□□□□□ -0.17
CDH3-208ENST00000569036 SPDYE16A6NNV3 312 aaPredicted RBP13.99□□□□□ -0.17
CDH3-208ENST00000569036 SEMA3EO15041 775 aa13.99□□□□□ -0.17
CDH3-208ENST00000569036 STRNO43815 780 aa13.99□□□□□ -0.17
CDH3-208ENST00000569036 ADAMTS4O75173 837 aa13.99□□□□□ -0.17
CDH3-208ENST00000569036 GDF11O95390 407 aa13.99□□□□□ -0.17
CDH3-208ENST00000569036 CYP2C18P33260 490 aa13.99□□□□□ -0.17
CDH3-208ENST00000569036 CATSPERGQ6ZRH7 1159 aa13.99□□□□□ -0.17
CDH3-208ENST00000569036 HFE2Q6ZVN8 426 aa13.99□□□□□ -0.17
CDH3-208ENST00000569036 MAML3Q96JK9 1138 aa13.99□□□□□ -0.17
CDH3-208ENST00000569036 DNAJC18Q9H819 358 aa13.99□□□□□ -0.17
CDH3-208ENST00000569036 ZNFX1Q9P2E3 1918 aaKnown RBP13.98□□□□□ -0.17
CDH3-208ENST00000569036 DCXO43602 365 aa13.98□□□□□ -0.17
CDH3-208ENST00000569036 ALDH1L1O75891 902 aa13.98□□□□□ -0.17
CDH3-208ENST00000569036 CA3P07451 260 aa13.98□□□□□ -0.17
CDH3-208ENST00000569036 NBPF7P0C2Y1 421 aaPredicted RBP13.98□□□□□ -0.17
CDH3-208ENST00000569036 PHKA1P46020 1223 aa13.98□□□□□ -0.17
CDH3-208ENST00000569036 CDK7P50613 346 aa13.98□□□□□ -0.17
CDH3-208ENST00000569036 ZYXQ15942 572 aaKnown RBP13.98□□□□□ -0.17
CDH3-208ENST00000569036 PRSS33Q8NF86 280 aa13.98□□□□□ -0.17
CDH3-208ENST00000569036 MOV10L1Q9BXT6 1211 aaKnown RBP13.98□□□□□ -0.17
CDH3-208ENST00000569036 GINM1Q9NU53 330 aa13.98□□□□□ -0.17
CDH3-208ENST00000569036 ABCF2Q9UG63 623 aa13.98□□□□□ -0.17
CDH3-208ENST00000569036 NRBP1Q9UHY1 535 aa13.98□□□□□ -0.17
CDH3-208ENST00000569036 SLC4A7Q9Y6M7 1214 aa13.98□□□□□ -0.17
CDH3-208ENST00000569036 MOXD2PA6NHM9 499 aa13.97□□□□□ -0.17
CDH3-208ENST00000569036 MIER1Q8N108 512 aa13.97□□□□□ -0.17
CDH3-208ENST00000569036 ZNF384Q8TF68 577 aa13.97□□□□□ -0.17
CDH3-208ENST00000569036 SLC5A4Q9NY91 659 aa13.97□□□□□ -0.17
CDH3-208ENST00000569036 PI4KBQ9UBF8 816 aa13.97□□□□□ -0.17
CDH3-208ENST00000569036 CDK5RAP2Q96SN8 1893 aa13.97□□□□□ -0.17
CDH3-208ENST00000569036 SYNRGQ9UMZ2 1314 aa13.96□□□□□ -0.17
CDH3-208ENST00000569036 MYO15AQ9UKN7 3530 aa13.96□□□□□ -0.17
CDH3-208ENST00000569036 POTEB3A0JP26 581 aa13.96□□□□□ -0.17
CDH3-208ENST00000569036 MAP4K4O95819 1239 aaPredicted RBP13.96□□□□□ -0.17
CDH3-208ENST00000569036 TAL1P17542 331 aaPredicted RBP13.96□□□□□ -0.17
CDH3-208ENST00000569036 VCAM1P19320 739 aa13.96□□□□□ -0.17
CDH3-208ENST00000569036 MECOMQ03112 1051 aa13.96□□□□□ -0.17
CDH3-208ENST00000569036 RALBP1Q15311 655 aa13.96□□□□□ -0.17
CDH3-208ENST00000569036 CCSAPQ6IQ19 270 aaPredicted RBP13.96□□□□□ -0.17
CDH3-208ENST00000569036 POTEBQ6S5H4 581 aa13.96□□□□□ -0.17
CDH3-208ENST00000569036 SAMD1Q6SPF0 538 aaPredicted RBP13.96□□□□□ -0.17
CDH3-208ENST00000569036 FAM126BQ8IXS8 530 aa13.96□□□□□ -0.17
CDH3-208ENST00000569036 FEZ1Q99689 392 aa13.96□□□□□ -0.17
CDH3-208ENST00000569036 ELP1O95163 1332 aa13.95□□□□□ -0.18
CDH3-208ENST00000569036 PTPRZ1P23471 2315 aaPredicted RBP13.95□□□□□ -0.18
CDH3-208ENST00000569036 GFRA3O60609 400 aa13.95□□□□□ -0.18
CDH3-208ENST00000569036 AKR1A1P14550 325 aa13.95□□□□□ -0.18
CDH3-208ENST00000569036 IL9P15248 144 aa13.95□□□□□ -0.18
CDH3-208ENST00000569036 ATP2A2P16615 1042 aaKnown RBP13.95□□□□□ -0.18
CDH3-208ENST00000569036 ERCC3P19447 782 aa13.95□□□□□ -0.18
CDH3-208ENST00000569036 PTPN5P54829 565 aa13.95□□□□□ -0.18
CDH3-208ENST00000569036 GRB10Q13322 594 aa13.95□□□□□ -0.18
CDH3-208ENST00000569036 KCNA10Q16322 511 aa13.95□□□□□ -0.18
CDH3-208ENST00000569036 ATP2B3Q16720 1220 aa13.95□□□□□ -0.18
CDH3-208ENST00000569036 TMEM67Q5HYA8 995 aa13.95□□□□□ -0.18
CDH3-208ENST00000569036 SHCBP1Q8NEM2 672 aa13.95□□□□□ -0.18
CDH3-208ENST00000569036 KLHDC9Q8NEP7 349 aa13.95□□□□□ -0.18
CDH3-208ENST00000569036 ARNTL2Q8WYA1 636 aa13.95□□□□□ -0.18
CDH3-208ENST00000569036 UBE2ZQ9H832 354 aaPredicted RBP13.95□□□□□ -0.18
CDH3-208ENST00000569036 UMODL1Q5DID0 1318 aa13.94□□□□□ -0.18
CDH3-208ENST00000569036 CACNA1GO43497 2377 aa13.94□□□□□ -0.18
CDH3-208ENST00000569036 MYADML2A6NDP7 307 aa13.94□□□□□ -0.18
CDH3-208ENST00000569036 ZBBXA8MT70 800 aa13.94□□□□□ -0.18
CDH3-208ENST00000569036 EYA2O00167 538 aa13.94□□□□□ -0.18
CDH3-208ENST00000569036 ZBTB22O15209 634 aa13.94□□□□□ -0.18
CDH3-208ENST00000569036 TLR3O15455 904 aaKnown RBP13.94□□□□□ -0.18
CDH3-208ENST00000569036 ARHGEF15O94989 841 aa13.94□□□□□ -0.18
CDH3-208ENST00000569036 ZNF865P0CJ78 1059 aaPredicted RBP13.94□□□□□ -0.18
CDH3-208ENST00000569036 RASGRF1Q13972 1273 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms