RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 TMC7Q7Z402 723 aa7.46□□□□□ -1.22
CDH13-211ENST00000568770 RTF1Q92541 710 aaKnown RBP7.46□□□□□ -1.22
CDH13-211ENST00000568770 VPS33BQ9H267 617 aa7.46□□□□□ -1.22
CDH13-211ENST00000568770 FAM13BQ9NYF5 915 aa7.46□□□□□ -1.22
CDH13-211ENST00000568770 TMEM63CQ9P1W3 806 aa7.46□□□□□ -1.22
CDH13-211ENST00000568770 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.46□□□□□ -1.22
CDH13-211ENST00000568770 MAP3K15Q6ZN16 1313 aa7.46□□□□□ -1.22
CDH13-211ENST00000568770 UBN2Q6ZU65 1347 aa7.46□□□□□ -1.22
CDH13-211ENST00000568770 LRRC37AA6NMS7 1700 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 DDX60Q8IY21 1712 aaKnown RBP7.45□□□□□ -1.22
CDH13-211ENST00000568770 SHTN1A0MZ66 631 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 FAM155AB1AL88 458 aaPredicted RBP7.45□□□□□ -1.22
CDH13-211ENST00000568770 NDUFB5O43674 189 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 RAD17O75943 681 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 DCTN1Q14203 1278 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 SUSD4Q5VX71 490 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 DNAJC14Q6Y2X3 702 aaPredicted RBP7.45□□□□□ -1.22
CDH13-211ENST00000568770 KIF6Q6ZMV9 814 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 TTLL7Q6ZT98 887 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 USP48Q86UV5 1035 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 TRPM4Q8TD43 1214 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 BHMTQ93088 406 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 FAM129BQ96TA1 746 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 BCL2L13Q9BXK5 485 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 RBCK1Q9BYM8 510 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 TMX4Q9H1E5 349 aaPredicted RBP7.45□□□□□ -1.22
CDH13-211ENST00000568770 RNF186Q9NXI6 227 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 SAGE1Q9NXZ1 904 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 MIS18AQ9NYP9 233 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 CNOT7Q9UIV1 285 aaKnown RBP7.45□□□□□ -1.22
CDH13-211ENST00000568770 ATP6V0A2Q9Y487 856 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 BRCA2P51587 3418 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 CDHR2Q9BYE9 1310 aa7.45□□□□□ -1.22
CDH13-211ENST00000568770 IBTKQ9P2D0 1353 aaPredicted RBP7.45□□□□□ -1.22
CDH13-211ENST00000568770 SCN9AQ15858 1988 aa7.44□□□□□ -1.22
CDH13-211ENST00000568770 HTTP42858 3142 aa7.44□□□□□ -1.22
CDH13-211ENST00000568770 GPR182O15218 404 aa7.44□□□□□ -1.22
CDH13-211ENST00000568770 TRPA1O75762 1119 aa7.44□□□□□ -1.22
CDH13-211ENST00000568770 NTSR2O95665 410 aa7.44□□□□□ -1.22
CDH13-211ENST00000568770 MYL6BP14649 208 aa7.44□□□□□ -1.22
CDH13-211ENST00000568770 NFKB1P19838 968 aa7.44□□□□□ -1.22
CDH13-211ENST00000568770 KIF23Q02241 960 aaPredicted RBP7.44□□□□□ -1.22
CDH13-211ENST00000568770 TNIP1Q15025 636 aa7.44□□□□□ -1.22
CDH13-211ENST00000568770 TMCO4Q5TGY1 634 aa7.44□□□□□ -1.22
CDH13-211ENST00000568770 RGMBQ6NW40 437 aa7.44□□□□□ -1.22
CDH13-211ENST00000568770 DPP8Q6V1X1 898 aaPredicted RBP7.44□□□□□ -1.22
CDH13-211ENST00000568770 C1orf229Q6ZS94 237 aaPredicted RBP7.44□□□□□ -1.22
CDH13-211ENST00000568770 SYT9Q86SS6 491 aa7.44□□□□□ -1.22
CDH13-211ENST00000568770 SUPT20HQ8NEM7 779 aa7.44□□□□□ -1.22
CDH13-211ENST00000568770 RTFDC1Q9BY42 306 aaPredicted RBP7.44□□□□□ -1.22
CDH13-211ENST00000568770 ELP3Q9H9T3 547 aa7.44□□□□□ -1.22
CDH13-211ENST00000568770 CNTN3Q9P232 1028 aa7.44□□□□□ -1.22
CDH13-211ENST00000568770 PRR12Q9ULL5 1215 aa7.44□□□□□ -1.22
CDH13-211ENST00000568770 RRP7AQ9Y3A4 280 aaKnown RBP7.44□□□□□ -1.22
CDH13-211ENST00000568770 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.44□□□□□ -1.22
CDH13-211ENST00000568770 PSME4Q14997 1843 aa7.43□□□□□ -1.22
CDH13-211ENST00000568770 DUOX1Q9NRD9 1551 aa7.43□□□□□ -1.22
CDH13-211ENST00000568770 YDJCA8MPS7 323 aa7.43□□□□□ -1.22
CDH13-211ENST00000568770 H7C1D1 291 aa7.43□□□□□ -1.22
CDH13-211ENST00000568770 MMP20O60882 483 aa7.43□□□□□ -1.22
CDH13-211ENST00000568770 ZNF157P51786 506 aaPredicted RBP7.43□□□□□ -1.22
CDH13-211ENST00000568770 KIAA2012Q0VF49 1180 aa7.43□□□□□ -1.22
CDH13-211ENST00000568770 TAF7Q15545 349 aaPredicted RBP7.43□□□□□ -1.22
CDH13-211ENST00000568770 CCDC27Q2M243 656 aa7.43□□□□□ -1.22
CDH13-211ENST00000568770 ZNF468Q5VIY5 522 aaPredicted RBP7.43□□□□□ -1.22
CDH13-211ENST00000568770 XKR5Q6UX68 686 aa7.43□□□□□ -1.22
CDH13-211ENST00000568770 ZNF34Q8IZ26 560 aa7.43□□□□□ -1.22
CDH13-211ENST00000568770 ACDQ96AP0 544 aa7.43□□□□□ -1.22
CDH13-211ENST00000568770 C11orf16Q9NQ32 467 aa7.43□□□□□ -1.22
CDH13-211ENST00000568770 FOXD3Q9UJU5 478 aaPredicted RBP7.43□□□□□ -1.22
CDH13-211ENST00000568770 ABCC4O15439 1325 aa7.43□□□□□ -1.22
CDH13-211ENST00000568770 SZT2Q5T011 3432 aa7.42□□□□□ -1.22
CDH13-211ENST00000568770 ZBTB42B2RXF5 422 aa7.42□□□□□ -1.22
CDH13-211ENST00000568770 ADM5C9JUS6 153 aa7.42□□□□□ -1.22
CDH13-211ENST00000568770 CYP2E1P05181 493 aaPredicted RBP7.42□□□□□ -1.22
CDH13-211ENST00000568770 PCSK2P16519 638 aa7.42□□□□□ -1.22
CDH13-211ENST00000568770 USP5P45974 858 aa7.42□□□□□ -1.22
CDH13-211ENST00000568770 MFAP1P55081 439 aaKnown RBP7.42□□□□□ -1.22
CDH13-211ENST00000568770 SRSF11Q05519 484 aaKnown RBP7.42□□□□□ -1.22
CDH13-211ENST00000568770 KRT26Q7Z3Y9 468 aa7.42□□□□□ -1.22
CDH13-211ENST00000568770 PPP1R42Q7Z4L9 355 aa7.42□□□□□ -1.22
CDH13-211ENST00000568770 ZNF438Q7Z4V0 828 aa7.42□□□□□ -1.22
CDH13-211ENST00000568770 CTU1Q7Z7A3 348 aaKnown RBP7.42□□□□□ -1.22
CDH13-211ENST00000568770 FCHSD1Q86WN1 690 aa7.42□□□□□ -1.22
CDH13-211ENST00000568770 SP8Q8IXZ3 490 aa7.42□□□□□ -1.22
CDH13-211ENST00000568770 C2orf69Q8N8R5 385 aa7.42□□□□□ -1.22
CDH13-211ENST00000568770 WHAMMQ8TF30 809 aa7.42□□□□□ -1.22
CDH13-211ENST00000568770 ASB16Q96NS5 453 aa7.42□□□□□ -1.22
CDH13-211ENST00000568770 CITED4Q96RK1 184 aa7.42□□□□□ -1.22
CDH13-211ENST00000568770 CSRNP1Q96S65 589 aa7.42□□□□□ -1.22
CDH13-211ENST00000568770 NIF3L1Q9GZT8 377 aa7.42□□□□□ -1.22
CDH13-211ENST00000568770 GBA2Q9HCG7 927 aaPredicted RBP7.42□□□□□ -1.22
CDH13-211ENST00000568770 PODXL2Q9NZ53 605 aa7.42□□□□□ -1.22
CDH13-211ENST00000568770 FNDC3AQ9Y2H6 1198 aaKnown RBP7.42□□□□□ -1.22
CDH13-211ENST00000568770 NEURL1BA8MQ27 555 aa7.41□□□□□ -1.22
CDH13-211ENST00000568770 HTATSF1O43719 755 aaKnown RBP7.41□□□□□ -1.22
CDH13-211ENST00000568770 TNFRSF21O75509 655 aa7.41□□□□□ -1.22
CDH13-211ENST00000568770 BBOX1O75936 387 aa7.41□□□□□ -1.22
CDH13-211ENST00000568770 U2AF1L5P0DN76 240 aaPredicted RBP7.41□□□□□ -1.22
CDH13-211ENST00000568770 RARAP10276 462 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms