RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 ZNF174Q15697 407 aa11.01□□□□□ -0.65
TCF4-240ENST00000568673 CT47A1Q5JQC4 288 aaPredicted RBP11.01□□□□□ -0.65
TCF4-240ENST00000568673 TTC38Q5R3I4 469 aa11.01□□□□□ -0.65
TCF4-240ENST00000568673 E4F1Q66K89 784 aaPredicted RBP11.01□□□□□ -0.65
TCF4-240ENST00000568673 ZNF804AQ7Z570 1209 aa11.01□□□□□ -0.65
TCF4-240ENST00000568673 VSTM4Q8IW00 320 aa11.01□□□□□ -0.65
TCF4-240ENST00000568673 GRAMD1CQ8IYS0 662 aa11.01□□□□□ -0.65
TCF4-240ENST00000568673 CCDC112Q8NEF3 446 aa11.01□□□□□ -0.65
TCF4-240ENST00000568673 SYMPKQ92797 1274 aaKnown RBP11.01□□□□□ -0.65
TCF4-240ENST00000568673 KAT14Q9H8E8 782 aa11.01□□□□□ -0.65
TCF4-240ENST00000568673 IL17RBQ9NRM6 502 aa11.01□□□□□ -0.65
TCF4-240ENST00000568673 TNRC6CQ9HCJ0 1690 aaKnown RBP11.01□□□□□ -0.65
TCF4-240ENST00000568673 A0A087X0B3 334 aa11.01□□□□□ -0.65
TCF4-240ENST00000568673 PSDA5PKW4 1024 aaPredicted RBP11.01□□□□□ -0.65
TCF4-240ENST00000568673 KIF2AO00139 706 aaPredicted RBP11.01□□□□□ -0.65
TCF4-240ENST00000568673 LDHCP07864 332 aa11.01□□□□□ -0.65
TCF4-240ENST00000568673 ZNF18P17022 549 aa11.01□□□□□ -0.65
TCF4-240ENST00000568673 ERCC5P28715 1186 aaPredicted RBP11.01□□□□□ -0.65
TCF4-240ENST00000568673 ATP2C1P98194 919 aaPredicted RBP11.01□□□□□ -0.65
TCF4-240ENST00000568673 PTGDRQ13258 359 aa11.01□□□□□ -0.65
TCF4-240ENST00000568673 CCDC178Q5BJE1 867 aa11.01□□□□□ -0.65
TCF4-240ENST00000568673 NOM1Q5C9Z4 860 aaKnown RBP11.01□□□□□ -0.65
TCF4-240ENST00000568673 SH3RF1Q7Z6J0 888 aa11.01□□□□□ -0.65
TCF4-240ENST00000568673 SH3RF3Q8TEJ3 882 aaPredicted RBP11.01□□□□□ -0.65
TCF4-240ENST00000568673 DHX58Q96C10 678 aa11.01□□□□□ -0.65
TCF4-240ENST00000568673 NFE2L3Q9Y4A8 694 aa11.01□□□□□ -0.65
TCF4-240ENST00000568673 BAZ2BQ9UIF8 2168 aaKnown RBP11.01□□□□□ -0.65
TCF4-240ENST00000568673 SPATA31A6Q5VVP1 1343 aa11□□□□□ -0.65
TCF4-240ENST00000568673 VEGFAP15692 232 aaPredicted RBP11□□□□□ -0.65
TCF4-240ENST00000568673 FMR1Q06787 632 aaKnown RBP eCLIP11□□□□□ -0.65
TCF4-240ENST00000568673 AMOTL1Q8IY63 956 aa11□□□□□ -0.65
TCF4-240ENST00000568673 ZNF592Q92610 1267 aa11□□□□□ -0.65
TCF4-240ENST00000568673 GJD4Q96KN9 370 aaPredicted RBP11□□□□□ -0.65
TCF4-240ENST00000568673 MKNK2Q9HBH9 465 aa11□□□□□ -0.65
TCF4-240ENST00000568673 SH3GLB2Q9NR46 395 aa11□□□□□ -0.65
TCF4-240ENST00000568673 TCP11L1Q9NUJ3 509 aa11□□□□□ -0.65
TCF4-240ENST00000568673 ROBO3Q96MS0 1386 aa11□□□□□ -0.65
TCF4-240ENST00000568673 TOP1P11387 765 aaKnown RBP10.99□□□□□ -0.65
TCF4-240ENST00000568673 CDK11BP21127 795 aaKnown RBP10.99□□□□□ -0.65
TCF4-240ENST00000568673 CALML3P27482 149 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 SYCP1Q15431 976 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 DIXDC1Q155Q3 683 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 ZNF827Q17R98 1081 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 SLC4A8Q2Y0W8 1093 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 PRR5LQ6MZQ0 368 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 SLC51AQ86UW1 340 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 CERS3Q8IU89 383 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 PNMA1Q8ND90 353 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 DYNLL2Q96FJ2 89 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 PAGE5Q96GU1 130 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 TMX1Q9H3N1 280 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 VWA3AA6NCI4 1184 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 PLCD1P51178 756 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 GRIK5Q16478 980 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 PIK3AP1Q6ZUJ8 805 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 CERKQ8TCT0 537 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 ANKRD7Q92527 254 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 RPGRQ92834 1020 aaKnown RBP10.99□□□□□ -0.65
TCF4-240ENST00000568673 PPP1R13BQ96KQ4 1090 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 GSDMAQ96QA5 445 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 MED15Q96RN5 788 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 LRRC4BQ9NT99 713 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 INTS13Q9NVM9 706 aa10.99□□□□□ -0.65
TCF4-240ENST00000568673 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.98□□□□□ -0.65
TCF4-240ENST00000568673 TMEM232C9JQI7 657 aa10.98□□□□□ -0.65
TCF4-240ENST00000568673 TUBB4AP04350 444 aa10.98□□□□□ -0.65
TCF4-240ENST00000568673 TSPY3P0CV98 308 aa10.98□□□□□ -0.65
TCF4-240ENST00000568673 TSPY8P0CW00 308 aa10.98□□□□□ -0.65
TCF4-240ENST00000568673 AFMP43652 599 aa10.98□□□□□ -0.65
TCF4-240ENST00000568673 GNAQP50148 359 aa10.98□□□□□ -0.65
TCF4-240ENST00000568673 CRY2Q49AN0 593 aa10.98□□□□□ -0.65
TCF4-240ENST00000568673 GLIPR1L2Q4G1C9 344 aa10.98□□□□□ -0.65
TCF4-240ENST00000568673 ZNF444Q8N0Y2 327 aaPredicted RBP10.98□□□□□ -0.65
TCF4-240ENST00000568673 KIF18AQ8NI77 898 aa10.98□□□□□ -0.65
TCF4-240ENST00000568673 TGFBRAP1Q8WUH2 860 aa10.98□□□□□ -0.65
TCF4-240ENST00000568673 CD209Q9NNX6 404 aa10.98□□□□□ -0.65
TCF4-240ENST00000568673 ONECUT3O60422 494 aaPredicted RBP10.98□□□□□ -0.65
TCF4-240ENST00000568673 GPSM2P81274 684 aa10.98□□□□□ -0.65
TCF4-240ENST00000568673 DPYDQ12882 1025 aa10.98□□□□□ -0.65
TCF4-240ENST00000568673 GRM4Q14833 912 aa10.98□□□□□ -0.65
TCF4-240ENST00000568673 BLIDQ8IZY5 108 aa10.98□□□□□ -0.65
TCF4-240ENST00000568673 STAG2Q8N3U4 1231 aa10.98□□□□□ -0.65
TCF4-240ENST00000568673 IQUBQ8NA54 791 aa10.98□□□□□ -0.65
TCF4-240ENST00000568673 PYM1Q9BRP8 204 aaKnown RBP10.98□□□□□ -0.65
TCF4-240ENST00000568673 MAD2L2Q9UI95 211 aa10.98□□□□□ -0.65
TCF4-240ENST00000568673 SBF2Q86WG5 1849 aa10.97□□□□□ -0.65
TCF4-240ENST00000568673 USP17L3A6NCW0 530 aa10.97□□□□□ -0.65
TCF4-240ENST00000568673 USP17L4A6NCW7 530 aa10.97□□□□□ -0.65
TCF4-240ENST00000568673 CCP110O43303 1012 aa10.97□□□□□ -0.65
TCF4-240ENST00000568673 IL1R1P14778 569 aa10.97□□□□□ -0.65
TCF4-240ENST00000568673 ATP2B4P23634 1241 aa10.97□□□□□ -0.65
TCF4-240ENST00000568673 MCM7P33993 719 aa10.97□□□□□ -0.65
TCF4-240ENST00000568673 TBX2Q13207 712 aaPredicted RBP10.97□□□□□ -0.65
TCF4-240ENST00000568673 HSP90AA4PQ58FG1 418 aa10.97□□□□□ -0.65
TCF4-240ENST00000568673 ARL6IP4Q66PJ3 421 aaKnown RBP10.97□□□□□ -0.65
TCF4-240ENST00000568673 USP17L1Q7RTZ2 530 aa10.97□□□□□ -0.65
TCF4-240ENST00000568673 TRMT44Q8IYL2 757 aaKnown RBP10.97□□□□□ -0.65
TCF4-240ENST00000568673 GPR101Q96P66 508 aaPredicted RBP10.97□□□□□ -0.65
TCF4-240ENST00000568673 RTFDC1Q9BY42 306 aaPredicted RBP10.97□□□□□ -0.65
TCF4-240ENST00000568673 BCL11BQ9C0K0 894 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms