RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-231ENST00000568626 CHST3Q7LGC8 479 aa14.08□□□□□ -0.16
FANCA-231ENST00000568626 CCDC84Q86UT8 332 aaPredicted RBP14.08□□□□□ -0.16
FANCA-231ENST00000568626 SGMS1Q86VZ5 419 aa14.08□□□□□ -0.16
FANCA-231ENST00000568626 GMCL1P1Q8NEA9 526 aa14.08□□□□□ -0.16
FANCA-231ENST00000568626 LPAR1Q92633 364 aa14.08□□□□□ -0.16
FANCA-231ENST00000568626 C12orf42Q96LP6 360 aa14.08□□□□□ -0.16
FANCA-231ENST00000568626 KIF2CQ99661 725 aa14.08□□□□□ -0.16
FANCA-231ENST00000568626 AGXT2Q9BYV1 514 aa14.08□□□□□ -0.16
FANCA-231ENST00000568626 VCPKMTQ9H867 229 aa14.08□□□□□ -0.16
FANCA-231ENST00000568626 KAT14Q9H8E8 782 aa14.08□□□□□ -0.16
FANCA-231ENST00000568626 CLIP2Q9UDT6 1046 aa14.08□□□□□ -0.16
FANCA-231ENST00000568626 THSD7BQ9C0I4 1608 aa14.08□□□□□ -0.16
FANCA-231ENST00000568626 A0A0G2JLL6 359 aaPredicted RBP14.07□□□□□ -0.16
FANCA-231ENST00000568626 MTMR2Q13614 643 aa14.07□□□□□ -0.16
FANCA-231ENST00000568626 SH3D19Q5HYK7 790 aa14.07□□□□□ -0.16
FANCA-231ENST00000568626 USP17L2Q6R6M4 530 aa14.07□□□□□ -0.16
FANCA-231ENST00000568626 PAXIP1Q6ZW49 1069 aaPredicted RBP14.07□□□□□ -0.16
FANCA-231ENST00000568626 PRRT2Q7Z6L0 340 aaPredicted RBP14.07□□□□□ -0.16
FANCA-231ENST00000568626 SIAH1Q8IUQ4 282 aa14.07□□□□□ -0.16
FANCA-231ENST00000568626 PROCA1Q8NCQ7 364 aaPredicted RBP14.07□□□□□ -0.16
FANCA-231ENST00000568626 ACER1Q8TDN7 264 aa14.07□□□□□ -0.16
FANCA-231ENST00000568626 IGDCC4Q8TDY8 1250 aa14.07□□□□□ -0.16
FANCA-231ENST00000568626 CNKSR2Q8WXI2 1034 aa14.07□□□□□ -0.16
FANCA-231ENST00000568626 TMEM47Q9BQJ4 181 aa14.07□□□□□ -0.16
FANCA-231ENST00000568626 ALDH8A1Q9H2A2 487 aaPredicted RBP14.07□□□□□ -0.16
FANCA-231ENST00000568626 LY9Q9HBG7 655 aa14.07□□□□□ -0.16
FANCA-231ENST00000568626 PDRG1Q9NUG6 133 aa14.07□□□□□ -0.16
FANCA-231ENST00000568626 TMOD4Q9NZQ9 345 aa14.07□□□□□ -0.16
FANCA-231ENST00000568626 A0A1W2PRG0 241 aa14.06□□□□□ -0.16
FANCA-231ENST00000568626 MANSC4A6NHS7 340 aaPredicted RBP14.06□□□□□ -0.16
FANCA-231ENST00000568626 CCDC69A6NI79 296 aa14.06□□□□□ -0.16
FANCA-231ENST00000568626 ST18O60284 1047 aa14.06□□□□□ -0.16
FANCA-231ENST00000568626 CETPP11597 493 aa14.06□□□□□ -0.16
FANCA-231ENST00000568626 CPA1P15085 419 aa14.06□□□□□ -0.16
FANCA-231ENST00000568626 GJA5P36382 358 aa14.06□□□□□ -0.16
FANCA-231ENST00000568626 NEK4P51957 841 aa14.06□□□□□ -0.16
FANCA-231ENST00000568626 RCAN1P53805 252 aa14.06□□□□□ -0.16
FANCA-231ENST00000568626 NOGQ13253 232 aa14.06□□□□□ -0.16
FANCA-231ENST00000568626 NFXL1Q6ZNB6 911 aa14.06□□□□□ -0.16
FANCA-231ENST00000568626 Q6ZUG5 572 aa14.06□□□□□ -0.16
FANCA-231ENST00000568626 FASTKD5Q7L8L6 764 aaKnown RBP14.06□□□□□ -0.16
FANCA-231ENST00000568626 CATIPQ7Z7H3 387 aa14.06□□□□□ -0.16
FANCA-231ENST00000568626 REM2Q8IYK8 340 aaPredicted RBP14.06□□□□□ -0.16
FANCA-231ENST00000568626 LRRC47Q8N1G4 583 aaKnown RBP14.06□□□□□ -0.16
FANCA-231ENST00000568626 PNMA1Q8ND90 353 aa14.06□□□□□ -0.16
FANCA-231ENST00000568626 TCEANC2Q96MN5 208 aa14.06□□□□□ -0.16
FANCA-231ENST00000568626 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.06□□□□□ -0.16
FANCA-231ENST00000568626 FAM155AB1AL88 458 aaPredicted RBP14.05□□□□□ -0.16
FANCA-231ENST00000568626 WDR46O15213 610 aaKnown RBP14.05□□□□□ -0.16
FANCA-231ENST00000568626 DDAH1O94760 285 aa14.05□□□□□ -0.16
FANCA-231ENST00000568626 CALM1P0DP23 149 aa14.05□□□□□ -0.16
FANCA-231ENST00000568626 CALM2P0DP24 149 aa14.05□□□□□ -0.16
FANCA-231ENST00000568626 CALM3P0DP25 149 aa14.05□□□□□ -0.16
FANCA-231ENST00000568626 HMGCS2P54868 508 aa14.05□□□□□ -0.16
FANCA-231ENST00000568626 SREBF2Q12772 1141 aa14.05□□□□□ -0.16
FANCA-231ENST00000568626 COL9A3Q14050 684 aaPredicted RBP14.05□□□□□ -0.16
FANCA-231ENST00000568626 SYNE3Q6ZMZ3 975 aa14.05□□□□□ -0.16
FANCA-231ENST00000568626 DCAF4Q8WV16 495 aa14.05□□□□□ -0.16
FANCA-231ENST00000568626 GMCL1Q96IK5 515 aa14.05□□□□□ -0.16
FANCA-231ENST00000568626 CAPNS2Q96L46 248 aa14.05□□□□□ -0.16
FANCA-231ENST00000568626 LRRC2Q9BYS8 371 aa14.05□□□□□ -0.16
FANCA-231ENST00000568626 SLC12A7Q9Y666 1083 aa14.05□□□□□ -0.16
FANCA-231ENST00000568626 F5H6K3 240 aa14.04□□□□□ -0.16
FANCA-231ENST00000568626 NDUFB10O96000 172 aa14.04□□□□□ -0.16
FANCA-231ENST00000568626 INHBEP58166 350 aa14.04□□□□□ -0.16
FANCA-231ENST00000568626 KLRC3Q07444 240 aa14.04□□□□□ -0.16
FANCA-231ENST00000568626 PABPC4Q13310 644 aaKnown RBP eCLIP14.04□□□□□ -0.166e-8■□□□□ 9.5
FANCA-231ENST00000568626 SLFN13Q68D06 897 aa14.04□□□□□ -0.16
FANCA-231ENST00000568626 CYP4F22Q6NT55 531 aa14.04□□□□□ -0.16
FANCA-231ENST00000568626 ZNF654Q8IZM8 581 aa14.04□□□□□ -0.16
FANCA-231ENST00000568626 BRF1Q92994 677 aa14.04□□□□□ -0.16
FANCA-231ENST00000568626 MAP3K14Q99558 947 aa14.04□□□□□ -0.16
FANCA-231ENST00000568626 ZCCHC17Q9NP64 241 aaKnown RBP14.04□□□□□ -0.16
FANCA-231ENST00000568626 CCL15-CCL14A0A0B4J2E2 113 aa14.03□□□□□ -0.16
FANCA-231ENST00000568626 TESPA1A2RU30 521 aaPredicted RBP14.03□□□□□ -0.16
FANCA-231ENST00000568626 SNHG28P0DPA3 235 aa14.03□□□□□ -0.16
FANCA-231ENST00000568626 VCAM1P19320 739 aa14.03□□□□□ -0.16
FANCA-231ENST00000568626 MCM2P49736 904 aa14.03□□□□□ -0.16
FANCA-231ENST00000568626 VEGFBP49765 207 aa14.03□□□□□ -0.16
FANCA-231ENST00000568626 EVCP57679 992 aa14.03□□□□□ -0.16
FANCA-231ENST00000568626 MKRN3Q13064 507 aaKnown RBP14.03□□□□□ -0.16
FANCA-231ENST00000568626 ZYXQ15942 572 aaKnown RBP14.03□□□□□ -0.16
FANCA-231ENST00000568626 CCL15Q16663 113 aa14.03□□□□□ -0.16
FANCA-231ENST00000568626 ASPRV1Q53RT3 343 aa14.03□□□□□ -0.16
FANCA-231ENST00000568626 GPATCH4Q5T3I0 446 aaKnown RBP14.03□□□□□ -0.16
FANCA-231ENST00000568626 APOA5Q6Q788 366 aa14.03□□□□□ -0.16
FANCA-231ENST00000568626 MS4A4AQ96JQ5 239 aa14.03□□□□□ -0.16
FANCA-231ENST00000568626 EMILIN3Q9NT22 766 aa14.03□□□□□ -0.16
FANCA-231ENST00000568626 AGTPBP1Q9UPW5 1226 aa14.03□□□□□ -0.16
FANCA-231ENST00000568626 SLC45A1Q9Y2W3 748 aa14.03□□□□□ -0.16
FANCA-231ENST00000568626 NID2Q14112 1375 aa14.03□□□□□ -0.16
FANCA-231ENST00000568626 WDR33Q9C0J8 1336 aaKnown RBP14.02□□□□□ -0.17
FANCA-231ENST00000568626 KLF18A0A0U1RQI7 1052 aa14.02□□□□□ -0.17
FANCA-231ENST00000568626 FOXN1O15353 648 aa14.02□□□□□ -0.17
FANCA-231ENST00000568626 ZBTB43O43298 467 aa14.02□□□□□ -0.17
FANCA-231ENST00000568626 RAD21O60216 631 aa14.02□□□□□ -0.17
FANCA-231ENST00000568626 PDHBP11177 359 aa14.02□□□□□ -0.17
FANCA-231ENST00000568626 BMP3P12645 472 aa14.02□□□□□ -0.17
FANCA-231ENST00000568626 KIF5BP33176 963 aa14.02□□□□□ -0.17
FANCA-231ENST00000568626 MAP2K2P36507 400 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms