RNA–Protein interactions for RNA: ENST00000568494.1

ZNRF1-208, Transcript of zinc and ring finger 1, human

TSL 2

Gene ZNRF1, Length 2,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNRF1-208	ENST00000568494	IQCB1	Q15051	598 aa		15.27	■□□□□ 0.04
ZNRF1-208	ENST00000568494	EARS2	Q5JPH6	523 aa	Known RBP	15.27	■□□□□ 0.04
ZNRF1-208	ENST00000568494	C16orf86	Q6ZW13	317 aa		15.27	■□□□□ 0.04
ZNRF1-208	ENST00000568494	KRI1	Q8N9T8	703 aa	Known RBP	15.27	■□□□□ 0.04
ZNRF1-208	ENST00000568494	PNMA1	Q8ND90	353 aa		15.27	■□□□□ 0.04
ZNRF1-208	ENST00000568494	ANO10	Q9NW15	660 aa		15.27	■□□□□ 0.04
ZNRF1-208	ENST00000568494	KIAA1468	Q9P260	1216 aa		15.27	■□□□□ 0.04
ZNRF1-208	ENST00000568494	VEGFA	P15692	232 aa	Predicted RBP	15.27	■□□□□ 0.03
ZNRF1-208	ENST00000568494	KIF5B	P33176	963 aa		15.27	■□□□□ 0.03
ZNRF1-208	ENST00000568494	TMX4	Q9H1E5	349 aa	Predicted RBP	15.27	■□□□□ 0.03
ZNRF1-208	ENST00000568494	NAV1	Q8NEY1	1877 aa		15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	GRIN1	Q05586	938 aa		15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	GRM4	Q14833	912 aa		15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	NPY5R	Q15761	445 aa		15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	STAG2	Q8N3U4	1231 aa		15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	TIGD1	Q96MW7	591 aa		15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	FBXO2	Q9UK22	296 aa	Predicted RBP	15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	SUGT1	Q9Y2Z0	365 aa		15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	OFD1	O75665	1012 aa		15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	SCG2	P13521	617 aa		15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	PTPRE	P23469	700 aa		15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	PFKFB3	Q16875	520 aa	Predicted RBP	15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	NOM1	Q5C9Z4	860 aa	Known RBP	15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	SPECC1	Q5M775	1068 aa		15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	TNFRSF25	Q93038	417 aa		15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	ZNF830	Q96NB3	372 aa	Predicted RBP	15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	EYA3	Q99504	573 aa		15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	TMEM47	Q9BQJ4	181 aa		15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	ZNF287	Q9HBT7	754 aa		15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	TTF2	Q9UNY4	1162 aa	Known RBP	15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	15.26	■□□□□ 0.03
ZNRF1-208	ENST00000568494		G3V3G9	751 aa		15.25	■□□□□ 0.03
ZNRF1-208	ENST00000568494	DCAF8	Q5TAQ9	597 aa		15.25	■□□□□ 0.03
ZNRF1-208	ENST00000568494	MAD2L2	Q9UI95	211 aa		15.25	■□□□□ 0.03
ZNRF1-208	ENST00000568494	ARFGEF1	Q9Y6D6	1849 aa		15.25	■□□□□ 0.03
ZNRF1-208	ENST00000568494	SNED1	Q8TER0	1413 aa		15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	ZNF500	O60304	480 aa	Predicted RBP	15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	TPM2	P07951	284 aa		15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	YBX3	P16989	372 aa	Known RBP eCLIP	15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	SCNN1D	P51172	638 aa		15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	PICALM	Q13492	652 aa		15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	DHX40	Q8IX18	779 aa	Known RBP	15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	NEDD1	Q8NHV4	660 aa		15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	BRMS1	Q9HCU9	246 aa		15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	KCNH3	Q9ULD8	1083 aa		15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	STX8	Q9UNK0	236 aa		15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	CEP131	Q9UPN4	1083 aa		15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	MTMR7	Q9Y216	660 aa		15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	MYH6	P13533	1939 aa		15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	NLRP5	P59047	1200 aa		15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	SLC35G1	Q2M3R5	365 aa		15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	SPC24	Q8NBT2	197 aa		15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	KCNQ5	Q9NR82	932 aa		15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	USP40	Q9NVE5	1235 aa		15.24	■□□□□ 0.03
ZNRF1-208	ENST00000568494	TRIM75P	A6NK02	468 aa		15.23	■□□□□ 0.03
ZNRF1-208	ENST00000568494	GOLGA6L19	H0YKK7	550 aa		15.23	■□□□□ 0.03
ZNRF1-208	ENST00000568494	BIN1	O00499	593 aa		15.23	■□□□□ 0.03
ZNRF1-208	ENST00000568494	WNT7A	O00755	349 aa		15.23	■□□□□ 0.03
ZNRF1-208	ENST00000568494	ADAMTS3	O15072	1205 aa		15.23	■□□□□ 0.03
ZNRF1-208	ENST00000568494	ZNF75D	P51815	510 aa		15.23	■□□□□ 0.03
ZNRF1-208	ENST00000568494	LONRF3	Q496Y0	759 aa		15.23	■□□□□ 0.03
ZNRF1-208	ENST00000568494	CEP57L1	Q8IYX8	460 aa		15.23	■□□□□ 0.03
ZNRF1-208	ENST00000568494	DBNDD1	Q9H9R9	158 aa		15.23	■□□□□ 0.03
ZNRF1-208	ENST00000568494	DDX4	Q9NQI0	724 aa	Known RBP	15.23	■□□□□ 0.03
ZNRF1-208	ENST00000568494	SRPRB	Q9Y5M8	271 aa	Known RBP	15.23	■□□□□ 0.03
ZNRF1-208	ENST00000568494	CDK5RAP2	Q96SN8	1893 aa		15.22	■□□□□ 0.03
ZNRF1-208	ENST00000568494	GNAQ	P50148	359 aa		15.22	■□□□□ 0.03
ZNRF1-208	ENST00000568494	NLRP12	P59046	1061 aa		15.22	■□□□□ 0.03
ZNRF1-208	ENST00000568494	PLA2G4D	Q86XP0	818 aa		15.22	■□□□□ 0.03
ZNRF1-208	ENST00000568494	TRIM5	Q9C035	493 aa		15.22	■□□□□ 0.03
ZNRF1-208	ENST00000568494	PALM3	A6NDB9	673 aa	Predicted RBP	15.22	■□□□□ 0.03
ZNRF1-208	ENST00000568494	ZNF174	Q15697	407 aa		15.22	■□□□□ 0.03
ZNRF1-208	ENST00000568494	DPCR1	Q3MIW9	517 aa		15.22	■□□□□ 0.03
ZNRF1-208	ENST00000568494	CCDC93	Q567U6	631 aa		15.22	■□□□□ 0.03
ZNRF1-208	ENST00000568494	KRBA2	Q6ZNG9	492 aa		15.22	■□□□□ 0.03
ZNRF1-208	ENST00000568494	ZNF579	Q8NAF0	562 aa	Known RBP	15.22	■□□□□ 0.03
ZNRF1-208	ENST00000568494	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	15.22	■□□□□ 0.03
ZNRF1-208	ENST00000568494	TTC12	Q9H892	705 aa	Predicted RBP	15.22	■□□□□ 0.03
ZNRF1-208	ENST00000568494	FAM13B	Q9NYF5	915 aa		15.22	■□□□□ 0.03
ZNRF1-208	ENST00000568494	FER1L6	Q2WGJ9	1857 aa		15.22	■□□□□ 0.03
ZNRF1-208	ENST00000568494	DDX60L	Q5H9U9	1706 aa	Known RBP	15.21	■□□□□ 0.03
ZNRF1-208	ENST00000568494	BECN2	A8MW95	431 aa		15.21	■□□□□ 0.03
ZNRF1-208	ENST00000568494	GOLGA8H	P0CJ92	632 aa		15.21	■□□□□ 0.03
ZNRF1-208	ENST00000568494	PNOC	Q13519	176 aa		15.21	■□□□□ 0.03
ZNRF1-208	ENST00000568494	ZRSR1	Q15695	479 aa	Known RBP	15.21	■□□□□ 0.03
ZNRF1-208	ENST00000568494	CC2D2B	Q6DHV5	1058 aa		15.21	■□□□□ 0.03
ZNRF1-208	ENST00000568494	CDC42EP5	Q6NZY7	148 aa		15.21	■□□□□ 0.03
ZNRF1-208	ENST00000568494	RASGRP2	Q7LDG7	609 aa		15.21	■□□□□ 0.03
ZNRF1-208	ENST00000568494	AOPEP	Q8N6M6	819 aa		15.21	■□□□□ 0.03
ZNRF1-208	ENST00000568494	NAT10	Q9H0A0	1025 aa	Known RBP	15.21	■□□□□ 0.03
ZNRF1-208	ENST00000568494	CSRNP2	Q9H175	543 aa		15.21	■□□□□ 0.03
ZNRF1-208	ENST00000568494	BAZ2B	Q9UIF8	2168 aa	Known RBP	15.21	■□□□□ 0.02
ZNRF1-208	ENST00000568494	CYTH3	O43739	400 aa		15.21	■□□□□ 0.02
ZNRF1-208	ENST00000568494	ISM2	Q6H9L7	571 aa		15.21	■□□□□ 0.02
ZNRF1-208	ENST00000568494	APOBEC3H	Q6NTF7	200 aa	Known RBP	15.21	■□□□□ 0.02
ZNRF1-208	ENST00000568494	HHIPL2	Q6UWX4	724 aa		15.21	■□□□□ 0.02
ZNRF1-208	ENST00000568494	PIK3AP1	Q6ZUJ8	805 aa		15.21	■□□□□ 0.02
ZNRF1-208	ENST00000568494	PODN	Q7Z5L7	613 aa		15.21	■□□□□ 0.02
ZNRF1-208	ENST00000568494	METTL16	Q86W50	562 aa	Known RBP	15.21	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms