RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 RNF180Q86T96 592 aa17.03■□□□□ 0.32
SMG1-213ENST00000567737 FOXP4Q8IVH2 680 aaPredicted RBP17.03■□□□□ 0.32
SMG1-213ENST00000567737 MICALL1Q8N3F8 863 aa17.03■□□□□ 0.32
SMG1-213ENST00000567737 ZNF384Q8TF68 577 aa17.03■□□□□ 0.32
SMG1-213ENST00000567737 NOL10Q9BSC4 688 aaKnown RBP17.03■□□□□ 0.32
SMG1-213ENST00000567737 PRKRIP1Q9H875 184 aaPredicted RBP17.03■□□□□ 0.32
SMG1-213ENST00000567737 XPNPEP3Q9NQH7 507 aa17.03■□□□□ 0.32
SMG1-213ENST00000567737 TCF20Q9UGU0 1960 aaKnown RBP17.02■□□□□ 0.32
SMG1-213ENST00000567737 A0A1W2PQ45 241 aaPredicted RBP17.02■□□□□ 0.32
SMG1-213ENST00000567737 A0A1W2PQY0 241 aa17.02■□□□□ 0.32
SMG1-213ENST00000567737 TIMP1P01033 207 aa17.02■□□□□ 0.32
SMG1-213ENST00000567737 RARBP10826 455 aa17.02■□□□□ 0.32
SMG1-213ENST00000567737 KCNQ1P51787 676 aa17.02■□□□□ 0.32
SMG1-213ENST00000567737 FAAP100Q0VG06 881 aa17.02■□□□□ 0.32
SMG1-213ENST00000567737 NSUN4Q96CB9 384 aaKnown RBP17.02■□□□□ 0.32
SMG1-213ENST00000567737 TOX2Q96NM4 488 aa17.02■□□□□ 0.32
SMG1-213ENST00000567737 USP44Q9H0E7 712 aa17.02■□□□□ 0.32
SMG1-213ENST00000567737 DNAJC18Q9H819 358 aa17.02■□□□□ 0.32
SMG1-213ENST00000567737 SLC28A3Q9HAS3 691 aa17.02■□□□□ 0.32
SMG1-213ENST00000567737 IL15P40933 162 aaPredicted RBP17.01■□□□□ 0.31
SMG1-213ENST00000567737 USP14P54578 494 aa17.01■□□□□ 0.31
SMG1-213ENST00000567737 SKIV2LQ15477 1246 aaKnown RBP17.01■□□□□ 0.31
SMG1-213ENST00000567737 TMEM240Q5SV17 173 aa17.01■□□□□ 0.31
SMG1-213ENST00000567737 MFSD5Q6N075 450 aa17.01■□□□□ 0.31
SMG1-213ENST00000567737 ANKRD33Q7Z3H0 272 aa17.01■□□□□ 0.31
SMG1-213ENST00000567737 WDR63Q8IWG1 891 aa17.01■□□□□ 0.31
SMG1-213ENST00000567737 SH3RF3Q8TEJ3 882 aaPredicted RBP17.01■□□□□ 0.31
SMG1-213ENST00000567737 RAI14Q9P0K7 980 aa17.01■□□□□ 0.31
SMG1-213ENST00000567737 SPDYE16A6NNV3 312 aaPredicted RBP17■□□□□ 0.31
SMG1-213ENST00000567737 GPR37L1O60883 481 aa17■□□□□ 0.31
SMG1-213ENST00000567737 VCAM1P19320 739 aa17■□□□□ 0.31
SMG1-213ENST00000567737 RASIP1Q5U651 963 aa17■□□□□ 0.31
SMG1-213ENST00000567737 METTL16Q86W50 562 aaKnown RBP17■□□□□ 0.31
SMG1-213ENST00000567737 NKX2-4Q9H2Z4 354 aa17■□□□□ 0.31
SMG1-213ENST00000567737 PLXNA1Q9UIW2 1896 aa17■□□□□ 0.31
SMG1-213ENST00000567737 ZNF236Q9UL36 1845 aa16.99■□□□□ 0.31
SMG1-213ENST00000567737 COBLO75128 1261 aa16.99■□□□□ 0.31
SMG1-213ENST00000567737 PGK1P00558 417 aa16.99■□□□□ 0.31
SMG1-213ENST00000567737 PSRC1Q6PGN9 363 aaPredicted RBP16.99■□□□□ 0.31
SMG1-213ENST00000567737 MOV10L1Q9BXT6 1211 aaKnown RBP16.99■□□□□ 0.31
SMG1-213ENST00000567737 STARD7Q9NQZ5 370 aa16.99■□□□□ 0.31
SMG1-213ENST00000567737 SIPA1L1O43166 1804 aa16.98■□□□□ 0.31
SMG1-213ENST00000567737 APBB1O00213 710 aa16.98■□□□□ 0.31
SMG1-213ENST00000567737 ERC2O15083 957 aa16.98■□□□□ 0.31
SMG1-213ENST00000567737 BAG3O95817 575 aa16.98■□□□□ 0.31
SMG1-213ENST00000567737 GH2P01242 217 aa16.98■□□□□ 0.31
SMG1-213ENST00000567737 HLA-DOAP06340 250 aa16.98■□□□□ 0.31
SMG1-213ENST00000567737 PLCG2P16885 1265 aa16.98■□□□□ 0.31
SMG1-213ENST00000567737 TIMM10P62072 90 aa16.98■□□□□ 0.31
SMG1-213ENST00000567737 MVPQ14764 893 aaKnown RBP16.98■□□□□ 0.31
SMG1-213ENST00000567737 ATF7IPQ6VMQ6 1270 aa16.98■□□□□ 0.31
SMG1-213ENST00000567737 C16orf59Q7L2K0 433 aa16.98■□□□□ 0.31
SMG1-213ENST00000567737 MAPKAPK5Q8IW41 473 aa16.98■□□□□ 0.31
SMG1-213ENST00000567737 TMEM199Q8N511 208 aa16.98■□□□□ 0.31
SMG1-213ENST00000567737 NUP133Q8WUM0 1156 aa16.98■□□□□ 0.31
SMG1-213ENST00000567737 HERVK_113Q902F9 699 aa16.98■□□□□ 0.31
SMG1-213ENST00000567737 MTIF3Q9H2K0 278 aaKnown RBP16.98■□□□□ 0.31
SMG1-213ENST00000567737 NRBP1Q9UHY1 535 aa16.98■□□□□ 0.31
SMG1-213ENST00000567737 PIEZO1Q92508 2521 aa16.97■□□□□ 0.31
SMG1-213ENST00000567737 FAM86C2PA6NEL3 165 aa16.97■□□□□ 0.31
SMG1-213ENST00000567737 TBC1D9Q6ZT07 1266 aa16.97■□□□□ 0.31
SMG1-213ENST00000567737 ZNF365Q70YC5 407 aa16.97■□□□□ 0.31
SMG1-213ENST00000567737 SHCBP1Q8NEM2 672 aa16.97■□□□□ 0.31
SMG1-213ENST00000567737 TGFBRAP1Q8WUH2 860 aa16.97■□□□□ 0.31
SMG1-213ENST00000567737 MAML3Q96JK9 1138 aa16.97■□□□□ 0.31
SMG1-213ENST00000567737 KIAA1683Q9H0B3 1180 aa16.97■□□□□ 0.31
SMG1-213ENST00000567737 RPAP3Q9H6T3 665 aaPredicted RBP16.97■□□□□ 0.31
SMG1-213ENST00000567737 AATFQ9NY61 560 aaKnown RBP eCLIP16.97■□□□□ 0.31
SMG1-213ENST00000567737 TBX21Q9UL17 535 aa16.97■□□□□ 0.31
SMG1-213ENST00000567737 PALD1Q9ULE6 856 aa16.97■□□□□ 0.31
SMG1-213ENST00000567737 SALL2Q9Y467 1007 aaPredicted RBP16.97■□□□□ 0.31
SMG1-213ENST00000567737 FLT1P17948 1338 aa16.96■□□□□ 0.31
SMG1-213ENST00000567737 ACRP10323 421 aa16.96■□□□□ 0.31
SMG1-213ENST00000567737 CSF2RAP15509 400 aa16.96■□□□□ 0.31
SMG1-213ENST00000567737 ERCC3P19447 782 aa16.96■□□□□ 0.31
SMG1-213ENST00000567737 MRE11P49959 708 aa16.96■□□□□ 0.31
SMG1-213ENST00000567737 SPATA5Q8NB90 893 aa16.96■□□□□ 0.31
SMG1-213ENST00000567737 XAGE2Q96GT9 111 aa16.96■□□□□ 0.31
SMG1-213ENST00000567737 TSEN34Q9BSV6 310 aaKnown RBP16.96■□□□□ 0.31
SMG1-213ENST00000567737 C11orf16Q9NQ32 467 aa16.96■□□□□ 0.31
SMG1-213ENST00000567737 HMG20BQ9P0W2 317 aa16.96■□□□□ 0.31
SMG1-213ENST00000567737 MROH7Q68CQ1 1323 aa16.96■□□□□ 0.3
SMG1-213ENST00000567737 CHD9Q3L8U1 2897 aa16.95■□□□□ 0.3
SMG1-213ENST00000567737 MYO9BQ13459 2157 aa16.95■□□□□ 0.3
SMG1-213ENST00000567737 XIRP2A4UGR9 3374 aa16.95■□□□□ 0.3
SMG1-213ENST00000567737 A0A1B0GUL7 405 aa16.95■□□□□ 0.3
SMG1-213ENST00000567737 RAB3GAP1Q15042 981 aa16.95■□□□□ 0.3
SMG1-213ENST00000567737 PPP2R2DQ66LE6 453 aa16.95■□□□□ 0.3
SMG1-213ENST00000567737 ABRAQ8N0Z2 381 aa16.95■□□□□ 0.3
SMG1-213ENST00000567737 SPATC1LQ9H0A9 340 aa16.95■□□□□ 0.3
SMG1-213ENST00000567737 MROH8Q9H579 483 aa16.95■□□□□ 0.3
SMG1-213ENST00000567737 LRP2BPQ9P2M1 347 aa16.95■□□□□ 0.3
SMG1-213ENST00000567737 AKAP2Q9Y2D5 859 aa16.95■□□□□ 0.3
SMG1-213ENST00000567737 YBX2Q9Y2T7 364 aaKnown RBP16.95■□□□□ 0.3
SMG1-213ENST00000567737 PTPRCP08575 1304 aa16.95■□□□□ 0.3
SMG1-213ENST00000567737 ZNF521Q96K83 1311 aa16.95■□□□□ 0.3
SMG1-213ENST00000567737 AKR1A1P14550 325 aa16.94■□□□□ 0.3
SMG1-213ENST00000567737 ACLYP53396 1101 aa16.94■□□□□ 0.3
SMG1-213ENST00000567737 PI16Q6UXB8 463 aa16.94■□□□□ 0.3
SMG1-213ENST00000567737 NCAPG2Q86XI2 1143 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms