RNA–Protein interactions for RNA: ENST00000567165.5

LYRM1-207, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-207ENST00000567165 MS4A3Q96HJ5 214 aa13.13□□□□□ -0.31
LYRM1-207ENST00000567165 NUDT12Q9BQG2 462 aa13.13□□□□□ -0.31
LYRM1-207ENST00000567165 RPAP3Q9H6T3 665 aaPredicted RBP13.13□□□□□ -0.31
LYRM1-207ENST00000567165 CEP290O15078 2479 aa13.13□□□□□ -0.31
LYRM1-207ENST00000567165 RANBP2P49792 3224 aaKnown RBP13.12□□□□□ -0.31
LYRM1-207ENST00000567165 CHRM1P11229 460 aaPredicted RBP13.12□□□□□ -0.31
LYRM1-207ENST00000567165 CCL14Q16627 93 aa13.12□□□□□ -0.31
LYRM1-207ENST00000567165 TSHZ3Q63HK5 1081 aa13.12□□□□□ -0.31
LYRM1-207ENST00000567165 PLEKHH3Q7Z736 793 aa13.12□□□□□ -0.31
LYRM1-207ENST00000567165 CLEC10AQ8IUN9 316 aa13.12□□□□□ -0.31
LYRM1-207ENST00000567165 CCAR1Q8IX12 1150 aaKnown RBP13.12□□□□□ -0.31
LYRM1-207ENST00000567165 DIS3LQ8TF46 1054 aaKnown RBP13.12□□□□□ -0.31
LYRM1-207ENST00000567165 HTATIP2Q9BUP3 242 aa13.12□□□□□ -0.31
LYRM1-207ENST00000567165 BTBD7Q9P203 1132 aa13.12□□□□□ -0.31
LYRM1-207ENST00000567165 SPDYE16A6NNV3 312 aaPredicted RBP13.11□□□□□ -0.31
LYRM1-207ENST00000567165 AKR1B1P15121 316 aa13.11□□□□□ -0.31
LYRM1-207ENST00000567165 UBE3CQ15386 1083 aa13.11□□□□□ -0.31
LYRM1-207ENST00000567165 KIAA1755Q5JYT7 1200 aa13.11□□□□□ -0.31
LYRM1-207ENST00000567165 MORN1Q5T089 497 aa13.11□□□□□ -0.31
LYRM1-207ENST00000567165 TMEM179Q6ZVK1 233 aa13.11□□□□□ -0.31
LYRM1-207ENST00000567165 USP6NLQ92738 828 aa13.11□□□□□ -0.31
LYRM1-207ENST00000567165 PAWRQ96IZ0 340 aaKnown RBP13.11□□□□□ -0.31
LYRM1-207ENST00000567165 PUS7LQ9H0K6 701 aaKnown RBP13.11□□□□□ -0.31
LYRM1-207ENST00000567165 CWC22Q9HCG8 908 aaKnown RBP13.11□□□□□ -0.31
LYRM1-207ENST00000567165 HMX1Q9NP08 348 aaPredicted RBP13.11□□□□□ -0.31
LYRM1-207ENST00000567165 ATP8A2Q9NTI2 1148 aa13.11□□□□□ -0.31
LYRM1-207ENST00000567165 ECHDC1Q9NTX5 307 aa13.11□□□□□ -0.31
LYRM1-207ENST00000567165 SWAP70Q9UH65 585 aa13.11□□□□□ -0.31
LYRM1-207ENST00000567165 RABGAP1Q9Y3P9 1069 aa13.11□□□□□ -0.31
LYRM1-207ENST00000567165 PCDHB13Q9Y5F0 798 aa13.11□□□□□ -0.31
LYRM1-207ENST00000567165 SLC4A4Q9Y6R1 1079 aa13.11□□□□□ -0.31
LYRM1-207ENST00000567165 ALPK3Q96L96 1907 aa13.11□□□□□ -0.31
LYRM1-207ENST00000567165 RPTORQ8N122 1335 aa13.11□□□□□ -0.31
LYRM1-207ENST00000567165 USP17L12C9JPN9 530 aa13.1□□□□□ -0.31
LYRM1-207ENST00000567165 USP17L21D6R901 530 aa13.1□□□□□ -0.31
LYRM1-207ENST00000567165 XRCC5P13010 732 aaKnown RBP13.1□□□□□ -0.31
LYRM1-207ENST00000567165 ZKSCAN1P17029 563 aaPredicted RBP13.1□□□□□ -0.31
LYRM1-207ENST00000567165 RGS2P41220 211 aa13.1□□□□□ -0.31
LYRM1-207ENST00000567165 MAP3K21Q5TCX8 1036 aa13.1□□□□□ -0.31
LYRM1-207ENST00000567165 C12orf60Q5U649 245 aa13.1□□□□□ -0.31
LYRM1-207ENST00000567165 WDR78Q5VTH9 848 aa13.1□□□□□ -0.31
LYRM1-207ENST00000567165 APBA2Q99767 749 aa13.1□□□□□ -0.31
LYRM1-207ENST00000567165 TANGO6Q9C0B7 1094 aa13.1□□□□□ -0.31
LYRM1-207ENST00000567165 DCTPP1Q9H773 170 aa13.1□□□□□ -0.31
LYRM1-207ENST00000567165 A0A0G2JMZ2 1700 aa13.1□□□□□ -0.31
LYRM1-207ENST00000567165 RLFQ13129 1914 aa13.09□□□□□ -0.31
LYRM1-207ENST00000567165 SZT2Q5T011 3432 aa13.09□□□□□ -0.31
LYRM1-207ENST00000567165 CCND3P30281 292 aaPredicted RBP13.09□□□□□ -0.31
LYRM1-207ENST00000567165 CDK8P49336 464 aa13.09□□□□□ -0.31
LYRM1-207ENST00000567165 FXR1P51114 621 aaKnown RBP eCLIP13.09□□□□□ -0.31
LYRM1-207ENST00000567165 ICA1Q05084 483 aa13.09□□□□□ -0.31
LYRM1-207ENST00000567165 CACNB2Q08289 660 aaPredicted RBP13.09□□□□□ -0.31
LYRM1-207ENST00000567165 ZSCAN25Q6NSZ9 544 aa13.09□□□□□ -0.31
LYRM1-207ENST00000567165 LBX2Q6XYB7 198 aa13.09□□□□□ -0.31
LYRM1-207ENST00000567165 C16orf86Q6ZW13 317 aa13.09□□□□□ -0.31
LYRM1-207ENST00000567165 SIAH1Q8IUQ4 282 aa13.09□□□□□ -0.31
LYRM1-207ENST00000567165 EVI5O60447 810 aa13.08□□□□□ -0.32
LYRM1-207ENST00000567165 CCNA1P78396 465 aa13.08□□□□□ -0.32
LYRM1-207ENST00000567165 MAP2K5Q13163 448 aa13.08□□□□□ -0.32
LYRM1-207ENST00000567165 CTR9Q6PD62 1173 aa13.08□□□□□ -0.32
LYRM1-207ENST00000567165 AMOTL1Q8IY63 956 aa13.08□□□□□ -0.32
LYRM1-207ENST00000567165 TRMT44Q8IYL2 757 aaKnown RBP13.08□□□□□ -0.32
LYRM1-207ENST00000567165 SPICE1Q8N0Z3 855 aa13.08□□□□□ -0.32
LYRM1-207ENST00000567165 DDRGK1Q96HY6 314 aa13.08□□□□□ -0.32
LYRM1-207ENST00000567165 FLRT1Q9NZU1 646 aa13.08□□□□□ -0.32
LYRM1-207ENST00000567165 RBM27Q9P2N5 1060 aaKnown RBP13.08□□□□□ -0.32
LYRM1-207ENST00000567165 PCDHB15Q9Y5E8 787 aa13.08□□□□□ -0.32
LYRM1-207ENST00000567165 PARP14Q460N5 1801 aa13.07□□□□□ -0.32
LYRM1-207ENST00000567165 GLRX3O76003 335 aaKnown RBP13.07□□□□□ -0.32
LYRM1-207ENST00000567165 CAPN2P17655 700 aa13.07□□□□□ -0.32
LYRM1-207ENST00000567165 PTPREP23469 700 aa13.07□□□□□ -0.32
LYRM1-207ENST00000567165 GRB14Q14449 540 aa13.07□□□□□ -0.32
LYRM1-207ENST00000567165 COG2Q14746 738 aa13.07□□□□□ -0.32
LYRM1-207ENST00000567165 NECAB2Q7Z6G3 386 aa13.07□□□□□ -0.32
LYRM1-207ENST00000567165 STK11IPQ8N1F8 1099 aa13.07□□□□□ -0.32
LYRM1-207ENST00000567165 KBTBD3Q8NAB2 608 aa13.07□□□□□ -0.32
LYRM1-207ENST00000567165 ANKLE1Q8NAG6 615 aa13.07□□□□□ -0.32
LYRM1-207ENST00000567165 OSBP2Q969R2 916 aa13.07□□□□□ -0.32
LYRM1-207ENST00000567165 GPATCH3Q96I76 525 aa13.07□□□□□ -0.32
LYRM1-207ENST00000567165 STRBPQ96SI9 672 aaKnown RBP13.07□□□□□ -0.32
LYRM1-207ENST00000567165 ARHGEF10LQ9HCE6 1279 aa13.07□□□□□ -0.32
LYRM1-207ENST00000567165 OGDHLQ9ULD0 1010 aa13.07□□□□□ -0.32
LYRM1-207ENST00000567165 TMX2Q9Y320 296 aa13.07□□□□□ -0.32
LYRM1-207ENST00000567165 NR2E3Q9Y5X4 410 aa13.07□□□□□ -0.32
LYRM1-207ENST00000567165 FRMPD3Q5JV73 1810 aa13.06□□□□□ -0.32
LYRM1-207ENST00000567165 TRIOBPQ9H2D6 2365 aa13.06□□□□□ -0.32
LYRM1-207ENST00000567165 SLC15A5A6NIM6 579 aa13.06□□□□□ -0.32
LYRM1-207ENST00000567165 ATP2B2Q01814 1243 aa13.06□□□□□ -0.32
LYRM1-207ENST00000567165 NPLOC4Q8TAT6 608 aa13.06□□□□□ -0.32
LYRM1-207ENST00000567165 OTUD7AQ8TE49 926 aaPredicted RBP13.06□□□□□ -0.32
LYRM1-207ENST00000567165 CCDC17Q96LX7 622 aa13.06□□□□□ -0.32
LYRM1-207ENST00000567165 MOV10L1Q9BXT6 1211 aaKnown RBP13.06□□□□□ -0.32
LYRM1-207ENST00000567165 VCPKMTQ9H867 229 aa13.06□□□□□ -0.32
LYRM1-207ENST00000567165 ARPP21Q9UBL0 812 aaPredicted RBP13.06□□□□□ -0.32
LYRM1-207ENST00000567165 LAMA3Q16787 3333 aa13.06□□□□□ -0.32
LYRM1-207ENST00000567165 GREB1LQ9C091 1923 aaPredicted RBP13.05□□□□□ -0.32
LYRM1-207ENST00000567165 ZNF236Q9UL36 1845 aa13.05□□□□□ -0.32
LYRM1-207ENST00000567165 GSG1L2A8MUP6 293 aa13.05□□□□□ -0.32
LYRM1-207ENST00000567165 M0R2C6 588 aa13.05□□□□□ -0.32
LYRM1-207ENST00000567165 RNF113AO15541 343 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms