RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 TREML2Q5T2D2 321 aa19.3■□□□□ 0.68
SCAMP2-208ENST00000566557 KIAA1683Q9H0B3 1180 aa19.3■□□□□ 0.68
SCAMP2-208ENST00000566557 CNNM2Q9H8M5 875 aa19.3■□□□□ 0.68
SCAMP2-208ENST00000566557 NMT2O60551 498 aa19.29■□□□□ 0.68
SCAMP2-208ENST00000566557 KDM4AO75164 1064 aa19.29■□□□□ 0.68
SCAMP2-208ENST00000566557 FGRP09769 529 aa19.29■□□□□ 0.68
SCAMP2-208ENST00000566557 GPAT2Q6NUI2 795 aa19.29■□□□□ 0.68
SCAMP2-208ENST00000566557 RALYLQ86SE5 291 aaKnown RBP19.29■□□□□ 0.68
SCAMP2-208ENST00000566557 KRT23Q9C075 422 aa19.29■□□□□ 0.68
SCAMP2-208ENST00000566557 CLIP2Q9UDT6 1046 aa19.29■□□□□ 0.68
SCAMP2-208ENST00000566557 STX8Q9UNK0 236 aa19.29■□□□□ 0.68
SCAMP2-208ENST00000566557 COLQQ9Y215 455 aaPredicted RBP19.29■□□□□ 0.68
SCAMP2-208ENST00000566557 BRCA2P51587 3418 aa19.28■□□□□ 0.68
SCAMP2-208ENST00000566557 IGKV6D-41A0A0C4DH26 115 aa19.28■□□□□ 0.68
SCAMP2-208ENST00000566557 SLC27A2O14975 620 aa19.28■□□□□ 0.68
SCAMP2-208ENST00000566557 TTLL1O95922 423 aa19.28■□□□□ 0.68
SCAMP2-208ENST00000566557 PABPC4Q13310 644 aaKnown RBP eCLIP19.28■□□□□ 0.68
SCAMP2-208ENST00000566557 CRHR2Q13324 411 aa19.28■□□□□ 0.68
SCAMP2-208ENST00000566557 RNF20Q5VTR2 975 aa19.28■□□□□ 0.68
SCAMP2-208ENST00000566557 CREB3L3Q68CJ9 461 aa19.28■□□□□ 0.68
SCAMP2-208ENST00000566557 LRRC47Q8N1G4 583 aaKnown RBP19.28■□□□□ 0.68
SCAMP2-208ENST00000566557 ZKSCAN3Q9BRR0 538 aa19.28■□□□□ 0.68
SCAMP2-208ENST00000566557 ZFYVE28Q9HCC9 887 aa19.28■□□□□ 0.68
SCAMP2-208ENST00000566557 GOPCQ9HD26 462 aa19.28■□□□□ 0.68
SCAMP2-208ENST00000566557 EMILIN3Q9NT22 766 aa19.28■□□□□ 0.68
SCAMP2-208ENST00000566557 MTMR4Q9NYA4 1195 aa19.28■□□□□ 0.68
SCAMP2-208ENST00000566557 NYAP2Q9P242 653 aa19.28■□□□□ 0.68
SCAMP2-208ENST00000566557 PTPN22Q9Y2R2 807 aa19.28■□□□□ 0.68
SCAMP2-208ENST00000566557 TMX2Q9Y320 296 aa19.28■□□□□ 0.68
SCAMP2-208ENST00000566557 TAF6LQ9Y6J9 622 aa19.28■□□□□ 0.68
SCAMP2-208ENST00000566557 A0A0C4DFX4 3053 aa19.27■□□□□ 0.68
SCAMP2-208ENST00000566557 E7EWF7 191 aa19.27■□□□□ 0.68
SCAMP2-208ENST00000566557 IRX3P78415 501 aaPredicted RBP19.27■□□□□ 0.68
SCAMP2-208ENST00000566557 PPP4R3BQ5MIZ7 849 aa19.27■□□□□ 0.68
SCAMP2-208ENST00000566557 SIAH1Q8IUQ4 282 aa19.27■□□□□ 0.68
SCAMP2-208ENST00000566557 SPICE1Q8N0Z3 855 aa19.27■□□□□ 0.68
SCAMP2-208ENST00000566557 PARK7Q99497 189 aaKnown RBP19.27■□□□□ 0.68
SCAMP2-208ENST00000566557 VCPKMTQ9H867 229 aa19.27■□□□□ 0.68
SCAMP2-208ENST00000566557 ZCCHC17Q9NP64 241 aaKnown RBP19.27■□□□□ 0.68
SCAMP2-208ENST00000566557 PNMA3Q9UL41 463 aa19.27■□□□□ 0.68
SCAMP2-208ENST00000566557 ISY1Q9ULR0 285 aaKnown RBP19.27■□□□□ 0.68
SCAMP2-208ENST00000566557 CYP2C8P10632 490 aa19.26■□□□□ 0.67
SCAMP2-208ENST00000566557 VCAM1P19320 739 aa19.26■□□□□ 0.67
SCAMP2-208ENST00000566557 OSBPP22059 807 aa19.26■□□□□ 0.67
SCAMP2-208ENST00000566557 IQCA1Q86XH1 822 aa19.26■□□□□ 0.67
SCAMP2-208ENST00000566557 NCOA7Q8NI08 942 aa19.26■□□□□ 0.67
SCAMP2-208ENST00000566557 NKX2-3Q8TAU0 364 aa19.26■□□□□ 0.67
SCAMP2-208ENST00000566557 SMCR8Q8TEV9 937 aaPredicted RBP19.26■□□□□ 0.67
SCAMP2-208ENST00000566557 C12orf42Q96LP6 360 aa19.26■□□□□ 0.67
SCAMP2-208ENST00000566557 TANGO6Q9C0B7 1094 aa19.26■□□□□ 0.67
SCAMP2-208ENST00000566557 RPAP3Q9H6T3 665 aaPredicted RBP19.26■□□□□ 0.67
SCAMP2-208ENST00000566557 MTMR7Q9Y216 660 aa19.26■□□□□ 0.67
SCAMP2-208ENST00000566557 KIAA0100Q14667 2235 aaKnown RBP19.25■□□□□ 0.67
SCAMP2-208ENST00000566557 NECTIN1Q15223 517 aa19.25■□□□□ 0.67
SCAMP2-208ENST00000566557 SAMD1Q6SPF0 538 aaPredicted RBP19.25■□□□□ 0.67
SCAMP2-208ENST00000566557 STOX1Q6ZVD7 989 aa19.25■□□□□ 0.67
SCAMP2-208ENST00000566557 CHMP4CQ96CF2 233 aa19.25■□□□□ 0.67
SCAMP2-208ENST00000566557 ERO1AQ96HE7 468 aa19.25■□□□□ 0.67
SCAMP2-208ENST00000566557 UBAC1Q9BSL1 405 aa19.25■□□□□ 0.67
SCAMP2-208ENST00000566557 TMEM106CQ9BVX2 250 aa19.25■□□□□ 0.67
SCAMP2-208ENST00000566557 IL17RBQ9NRM6 502 aa19.25■□□□□ 0.67
SCAMP2-208ENST00000566557 SZT2Q5T011 3432 aa19.25■□□□□ 0.67
SCAMP2-208ENST00000566557 NT5C2P49902 561 aa19.24■□□□□ 0.67
SCAMP2-208ENST00000566557 CD99L2Q8TCZ2 262 aa19.24■□□□□ 0.67
SCAMP2-208ENST00000566557 LPAR1Q92633 364 aa19.24■□□□□ 0.67
SCAMP2-208ENST00000566557 ARMC5Q96C12 935 aa19.24■□□□□ 0.67
SCAMP2-208ENST00000566557 ASCC2Q9H1I8 757 aaPredicted RBP19.24■□□□□ 0.67
SCAMP2-208ENST00000566557 EFCC1Q9HA90 598 aa19.24■□□□□ 0.67
SCAMP2-208ENST00000566557 SLC45A1Q9Y2W3 748 aa19.24■□□□□ 0.67
SCAMP2-208ENST00000566557 TNKSO95271 1327 aa19.24■□□□□ 0.67
SCAMP2-208ENST00000566557 USP17L15C9J2P7 530 aa19.23■□□□□ 0.67
SCAMP2-208ENST00000566557 USP17L13C9JLJ4 530 aa19.23■□□□□ 0.67
SCAMP2-208ENST00000566557 USP17L11C9JVI0 530 aa19.23■□□□□ 0.67
SCAMP2-208ENST00000566557 USP17L18D6R9N7 530 aa19.23■□□□□ 0.67
SCAMP2-208ENST00000566557 USP17L22D6RA61 530 aa19.23■□□□□ 0.67
SCAMP2-208ENST00000566557 USP17L17D6RBQ6 530 aa19.23■□□□□ 0.67
SCAMP2-208ENST00000566557 USP17L19D6RCP7 530 aa19.23■□□□□ 0.67
SCAMP2-208ENST00000566557 USP17L20D6RJB6 530 aa19.23■□□□□ 0.67
SCAMP2-208ENST00000566557 ZKSCAN1P17029 563 aaPredicted RBP19.23■□□□□ 0.67
SCAMP2-208ENST00000566557 USP17L24Q0WX57 530 aa19.23■□□□□ 0.67
SCAMP2-208ENST00000566557 KIAA1755Q5JYT7 1200 aa19.23■□□□□ 0.67
SCAMP2-208ENST00000566557 CYB5R4Q7L1T6 521 aa19.23■□□□□ 0.67
SCAMP2-208ENST00000566557 ZSWIM5Q9P217 1185 aa19.23■□□□□ 0.67
SCAMP2-208ENST00000566557 CPA4Q9UI42 421 aa19.23■□□□□ 0.67
SCAMP2-208ENST00000566557 F5H6K3 240 aa19.22■□□□□ 0.67
SCAMP2-208ENST00000566557 WDR46O15213 610 aaKnown RBP19.22■□□□□ 0.67
SCAMP2-208ENST00000566557 NDUFB10O96000 172 aa19.22■□□□□ 0.67
SCAMP2-208ENST00000566557 MCCP23508 829 aa19.22■□□□□ 0.67
SCAMP2-208ENST00000566557 KLRC3Q07444 240 aa19.22■□□□□ 0.67
SCAMP2-208ENST00000566557 CCDC178Q5BJE1 867 aa19.22■□□□□ 0.67
SCAMP2-208ENST00000566557 ZSCAN10Q96SZ4 725 aaPredicted RBP19.22■□□□□ 0.67
SCAMP2-208ENST00000566557 NUP88Q99567 741 aaPredicted RBP19.22■□□□□ 0.67
SCAMP2-208ENST00000566557 TCP11L1Q9NUJ3 509 aa19.22■□□□□ 0.67
SCAMP2-208ENST00000566557 ERICH2A1L162 156 aa19.21■□□□□ 0.67
SCAMP2-208ENST00000566557 TLR2O60603 784 aa19.21■□□□□ 0.67
SCAMP2-208ENST00000566557 TOP1P11387 765 aaKnown RBP19.21■□□□□ 0.67
SCAMP2-208ENST00000566557 FAM83BQ5T0W9 1011 aa19.21■□□□□ 0.67
SCAMP2-208ENST00000566557 SLFN13Q68D06 897 aa19.21■□□□□ 0.67
SCAMP2-208ENST00000566557 CHST3Q7LGC8 479 aa19.21■□□□□ 0.67
SCAMP2-208ENST00000566557 MKL1Q969V6 931 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms