RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 NFXL1Q6ZNB6 911 aa19.5■□□□□ 0.71
RAB40C-210ENST00000566290 DDX11Q96FC9 970 aa19.5■□□□□ 0.71
RAB40C-210ENST00000566290 C8orf76Q96K31 380 aa19.5■□□□□ 0.71
RAB40C-210ENST00000566290 TDRD3Q9H7E2 651 aaKnown RBP19.5■□□□□ 0.71
RAB40C-210ENST00000566290 TCP11L1Q9NUJ3 509 aa19.5■□□□□ 0.71
RAB40C-210ENST00000566290 SZT2Q5T011 3432 aa19.5■□□□□ 0.71
RAB40C-210ENST00000566290 FMNL1O95466 1100 aaPredicted RBP19.49■□□□□ 0.71
RAB40C-210ENST00000566290 RHBDL3P58872 404 aa19.49■□□□□ 0.71
RAB40C-210ENST00000566290 FKBP1BP68106 108 aa19.49■□□□□ 0.71
RAB40C-210ENST00000566290 HDLBPQ00341 1268 aaKnown RBP19.49■□□□□ 0.71
RAB40C-210ENST00000566290 MKRN3Q13064 507 aaKnown RBP19.49■□□□□ 0.71
RAB40C-210ENST00000566290 HHIPL2Q6UWX4 724 aa19.49■□□□□ 0.71
RAB40C-210ENST00000566290 ZNF654Q8IZM8 581 aa19.49■□□□□ 0.71
RAB40C-210ENST00000566290 ZNF396Q96N95 335 aaPredicted RBP19.49■□□□□ 0.71
RAB40C-210ENST00000566290 RBM28Q9NW13 759 aaKnown RBP19.49■□□□□ 0.71
RAB40C-210ENST00000566290 ZNF70Q9UC06 446 aaPredicted RBP19.49■□□□□ 0.71
RAB40C-210ENST00000566290 FZD1Q9UP38 647 aa19.49■□□□□ 0.71
RAB40C-210ENST00000566290 TRIOBPQ9H2D6 2365 aa19.49■□□□□ 0.71
RAB40C-210ENST00000566290 PLIN4Q96Q06 1357 aa19.48■□□□□ 0.71
RAB40C-210ENST00000566290 ADD1P35611 737 aaKnown RBP19.48■□□□□ 0.71
RAB40C-210ENST00000566290 RTN1Q16799 776 aa19.48■□□□□ 0.71
RAB40C-210ENST00000566290 SPDYE2Q495Y8 402 aa19.48■□□□□ 0.71
RAB40C-210ENST00000566290 TTC6Q86TZ1 520 aa19.48■□□□□ 0.71
RAB40C-210ENST00000566290 APOBEC3FQ8IUX4 373 aaKnown RBP19.48■□□□□ 0.71
RAB40C-210ENST00000566290 ENAHQ8N8S7 591 aaPredicted RBP19.48■□□□□ 0.71
RAB40C-210ENST00000566290 CHAMP1Q96JM3 812 aa19.48■□□□□ 0.71
RAB40C-210ENST00000566290 GZF1Q9H116 711 aaPredicted RBP19.48■□□□□ 0.71
RAB40C-210ENST00000566290 DEFB129Q9H1M3 183 aa19.48■□□□□ 0.71
RAB40C-210ENST00000566290 VEZTQ9HBM0 779 aa19.48■□□□□ 0.71
RAB40C-210ENST00000566290 TMEM63CQ9P1W3 806 aa19.48■□□□□ 0.71
RAB40C-210ENST00000566290 NAP1L2Q9ULW6 460 aaPredicted RBP19.48■□□□□ 0.71
RAB40C-210ENST00000566290 DLL1O00548 723 aa19.47■□□□□ 0.71
RAB40C-210ENST00000566290 FIBPO43427 364 aa19.47■□□□□ 0.71
RAB40C-210ENST00000566290 CDC27P30260 824 aa19.47■□□□□ 0.71
RAB40C-210ENST00000566290 BTDP43251 543 aa19.47■□□□□ 0.71
RAB40C-210ENST00000566290 USP5P45974 858 aa19.47■□□□□ 0.71
RAB40C-210ENST00000566290 DIXDC1Q155Q3 683 aa19.47■□□□□ 0.71
RAB40C-210ENST00000566290 FERMT3Q86UX7 667 aa19.47■□□□□ 0.71
RAB40C-210ENST00000566290 MICU3Q86XE3 530 aa19.47■□□□□ 0.71
RAB40C-210ENST00000566290 DGKHQ86XP1 1220 aa19.47■□□□□ 0.71
RAB40C-210ENST00000566290 CDAN1Q8IWY9 1227 aa19.47■□□□□ 0.71
RAB40C-210ENST00000566290 FAM177A1Q8N128 213 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-210ENST00000566290 SH3RF3Q8TEJ3 882 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-210ENST00000566290 LEO1Q8WVC0 666 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-210ENST00000566290 RNF26Q9BY78 433 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-210ENST00000566290 SENP2Q9HC62 589 aa19.47■□□□□ 0.71
RAB40C-210ENST00000566290 RCOR1Q9UKL0 485 aa19.47■□□□□ 0.71
RAB40C-210ENST00000566290 PAPPA2Q9BXP8 1791 aa19.47■□□□□ 0.71
RAB40C-210ENST00000566290 SSC5DA1L4H1 1573 aa19.46■□□□□ 0.71
RAB40C-210ENST00000566290 NPM3O75607 178 aaKnown RBP19.46■□□□□ 0.71
RAB40C-210ENST00000566290 EN2P19622 333 aaPredicted RBP19.46■□□□□ 0.71
RAB40C-210ENST00000566290 CACNB3P54284 484 aa19.46■□□□□ 0.71
RAB40C-210ENST00000566290 RRP12Q5JTH9 1297 aaKnown RBP19.46■□□□□ 0.71
RAB40C-210ENST00000566290 CCDC183Q5T5S1 534 aa19.46■□□□□ 0.71
RAB40C-210ENST00000566290 APOBEC3HQ6NTF7 200 aaKnown RBP19.46■□□□□ 0.71
RAB40C-210ENST00000566290 LRSAM1Q6UWE0 723 aa19.46■□□□□ 0.71
RAB40C-210ENST00000566290 TRIM22Q8IYM9 498 aa19.46■□□□□ 0.71
RAB40C-210ENST00000566290 FANCBQ8NB91 859 aa19.46■□□□□ 0.71
RAB40C-210ENST00000566290 SPATA32Q96LK8 384 aa19.46■□□□□ 0.71
RAB40C-210ENST00000566290 TOMM22Q9NS69 142 aa19.46■□□□□ 0.71
RAB40C-210ENST00000566290 MCM9Q9NXL9 1143 aa19.46■□□□□ 0.71
RAB40C-210ENST00000566290 HTTP42858 3142 aa19.46■□□□□ 0.71
RAB40C-210ENST00000566290 CEP290O15078 2479 aa19.46■□□□□ 0.71
RAB40C-210ENST00000566290 MYO1BO43795 1136 aa19.45■□□□□ 0.7
RAB40C-210ENST00000566290 RANBP6O60518 1105 aaKnown RBP19.45■□□□□ 0.7
RAB40C-210ENST00000566290 GADD45BO75293 160 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-210ENST00000566290 DEXIO95424 95 aa19.45■□□□□ 0.7
RAB40C-210ENST00000566290 YEATS4O95619 227 aa19.45■□□□□ 0.7
RAB40C-210ENST00000566290 TROAPQ12815 778 aa19.45■□□□□ 0.7
RAB40C-210ENST00000566290 PRKG1Q13976 671 aa19.45■□□□□ 0.7
RAB40C-210ENST00000566290 CATIPQ7Z7H3 387 aa19.45■□□□□ 0.7
RAB40C-210ENST00000566290 TEKT1Q969V4 418 aa19.45■□□□□ 0.7
RAB40C-210ENST00000566290 ZDHHC15Q96MV8 337 aa19.45■□□□□ 0.7
RAB40C-210ENST00000566290 GRPEL1Q9HAV7 217 aa19.45■□□□□ 0.7
RAB40C-210ENST00000566290 INCENPQ9NQS7 918 aa19.45■□□□□ 0.7
RAB40C-210ENST00000566290 POLR3EQ9NVU0 708 aa19.45■□□□□ 0.7
RAB40C-210ENST00000566290 RBM27Q9P2N5 1060 aaKnown RBP19.45■□□□□ 0.7
RAB40C-210ENST00000566290 DAGLAQ9Y4D2 1042 aa19.45■□□□□ 0.7
RAB40C-210ENST00000566290 TRIM17Q9Y577 477 aa19.45■□□□□ 0.7
RAB40C-210ENST00000566290 MORC2Q9Y6X9 1032 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-210ENST00000566290 COL2A1P02458 1487 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-210ENST00000566290 FLT1P17948 1338 aa19.45■□□□□ 0.7
RAB40C-210ENST00000566290 MYH1P12882 1939 aa19.45■□□□□ 0.7
RAB40C-210ENST00000566290 TCP10L2B9ZVM9 353 aa19.44■□□□□ 0.7
RAB40C-210ENST00000566290 NOVP48745 357 aa19.44■□□□□ 0.7
RAB40C-210ENST00000566290 SSRP1Q08945 709 aaKnown RBP19.44■□□□□ 0.7
RAB40C-210ENST00000566290 RASA3Q14644 834 aa19.44■□□□□ 0.7
RAB40C-210ENST00000566290 IFIT1BQ5T764 474 aaKnown RBP19.44■□□□□ 0.7
RAB40C-210ENST00000566290 NBPF12Q5TAG4 269 aaPredicted RBP19.44■□□□□ 0.7
RAB40C-210ENST00000566290 C16orf86Q6ZW13 317 aa19.44■□□□□ 0.7
RAB40C-210ENST00000566290 NBPF11Q86T75 865 aa19.44■□□□□ 0.7
RAB40C-210ENST00000566290 ALG1Q9BT22 464 aa19.44■□□□□ 0.7
RAB40C-210ENST00000566290 CFHR5Q9BXR6 569 aa19.44■□□□□ 0.7
RAB40C-210ENST00000566290 GDPD2Q9HCC8 539 aa19.44■□□□□ 0.7
RAB40C-210ENST00000566290 RTEL1Q9NZ71 1219 aa19.44■□□□□ 0.7
RAB40C-210ENST00000566290 CENPFP49454 3210 aa19.43■□□□□ 0.7
RAB40C-210ENST00000566290 CYP2D7A0A087X1C5 515 aa19.43■□□□□ 0.7
RAB40C-210ENST00000566290 U2AF2P26368 475 aaKnown RBP eCLIP19.43■□□□□ 0.7
RAB40C-210ENST00000566290 OTOP1Q7RTM1 612 aa19.43■□□□□ 0.7
RAB40C-210ENST00000566290 TEX11Q8IYF3 940 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms