RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 MAP3K11Q16584 847 aa12.52□□□□□ -0.4
UBFD1-205ENST00000566136 RASSF3Q86WH2 238 aa12.52□□□□□ -0.4
UBFD1-205ENST00000566136 TBC1D20Q96BZ9 403 aa12.52□□□□□ -0.4
UBFD1-205ENST00000566136 PGBD4Q96DM1 585 aa12.52□□□□□ -0.4
UBFD1-205ENST00000566136 CAAP1Q9H8G2 361 aa12.52□□□□□ -0.4
UBFD1-205ENST00000566136 HDAC5Q9UQL6 1122 aa12.52□□□□□ -0.4
UBFD1-205ENST00000566136 TLR6Q9Y2C9 796 aa12.52□□□□□ -0.4
UBFD1-205ENST00000566136 MAP7D1Q3KQU3 841 aa12.52□□□□□ -0.41
UBFD1-205ENST00000566136 PPP4R3AQ6IN85 833 aa12.52□□□□□ -0.41
UBFD1-205ENST00000566136 EEPD1Q7L9B9 569 aa12.52□□□□□ -0.41
UBFD1-205ENST00000566136 GJD3Q8N144 294 aa12.52□□□□□ -0.41
UBFD1-205ENST00000566136 MFSD3Q96ES6 412 aa12.52□□□□□ -0.41
UBFD1-205ENST00000566136 CITED4Q96RK1 184 aa12.52□□□□□ -0.41
UBFD1-205ENST00000566136 IPO8O15397 1037 aaKnown RBP12.51□□□□□ -0.41
UBFD1-205ENST00000566136 VAMP4O75379 141 aa12.51□□□□□ -0.41
UBFD1-205ENST00000566136 USP46P62068 366 aa12.51□□□□□ -0.41
UBFD1-205ENST00000566136 EIF4A2Q14240 407 aaKnown RBP12.51□□□□□ -0.41
UBFD1-205ENST00000566136 FAM180BQ6P0A1 224 aa12.51□□□□□ -0.41
UBFD1-205ENST00000566136 FLCNQ8NFG4 579 aa12.51□□□□□ -0.41
UBFD1-205ENST00000566136 ATRIPQ8WXE1 791 aa12.51□□□□□ -0.41
UBFD1-205ENST00000566136 PLD4Q96BZ4 506 aa12.51□□□□□ -0.41
UBFD1-205ENST00000566136 STIM2Q9P246 746 aa12.51□□□□□ -0.41
UBFD1-205ENST00000566136 CAMTA1Q9Y6Y1 1673 aa12.51□□□□□ -0.41
UBFD1-205ENST00000566136 SOX9P48436 509 aa12.51□□□□□ -0.41
UBFD1-205ENST00000566136 CLK1P49759 484 aaKnown RBP12.51□□□□□ -0.41
UBFD1-205ENST00000566136 GNAI1P63096 354 aa12.51□□□□□ -0.41
UBFD1-205ENST00000566136 SULT6B1Q6IMI4 303 aa12.51□□□□□ -0.41
UBFD1-205ENST00000566136 SNX21Q969T3 373 aa12.51□□□□□ -0.41
UBFD1-205ENST00000566136 C2orf49Q9BVC5 232 aaPredicted RBP12.51□□□□□ -0.41
UBFD1-205ENST00000566136 GABRDO14764 452 aa12.5□□□□□ -0.41
UBFD1-205ENST00000566136 PUM3Q15397 648 aaKnown RBP12.5□□□□□ -0.41
UBFD1-205ENST00000566136 NXPE4Q6UWF7 544 aa12.5□□□□□ -0.41
UBFD1-205ENST00000566136 OTUD6BQ8N6M0 293 aa12.5□□□□□ -0.41
UBFD1-205ENST00000566136 KCNK17Q96T54 332 aa12.5□□□□□ -0.41
UBFD1-205ENST00000566136 GTF2IRD1Q9UHL9 959 aa12.5□□□□□ -0.41
UBFD1-205ENST00000566136 DMTF1Q9Y222 760 aa12.5□□□□□ -0.41
UBFD1-205ENST00000566136 THSD7AQ9UPZ6 1657 aa12.5□□□□□ -0.41
UBFD1-205ENST00000566136 CPDO75976 1380 aa12.5□□□□□ -0.41
UBFD1-205ENST00000566136 SSH2Q76I76 1423 aa12.5□□□□□ -0.41
UBFD1-205ENST00000566136 OAS2P29728 719 aaKnown RBP12.5□□□□□ -0.41
UBFD1-205ENST00000566136 CALD1Q05682 793 aaKnown RBP12.5□□□□□ -0.41
UBFD1-205ENST00000566136 OR8H2Q8N162 312 aa12.5□□□□□ -0.41
UBFD1-205ENST00000566136 CCDC34Q96HJ3 373 aa12.5□□□□□ -0.41
UBFD1-205ENST00000566136 SARGQ9BW04 601 aa12.5□□□□□ -0.41
UBFD1-205ENST00000566136 LGR6Q9HBX8 967 aa12.5□□□□□ -0.41
UBFD1-205ENST00000566136 ZBTB40Q9NUA8 1239 aa12.5□□□□□ -0.41
UBFD1-205ENST00000566136 TNKSO95271 1327 aa12.5□□□□□ -0.41
UBFD1-205ENST00000566136 GJB6O95452 261 aa12.49□□□□□ -0.41
UBFD1-205ENST00000566136 RPN1P04843 607 aaKnown RBP12.49□□□□□ -0.41
UBFD1-205ENST00000566136 ZNF853P0CG23 659 aa12.49□□□□□ -0.41
UBFD1-205ENST00000566136 CDC37Q16543 378 aaPredicted RBP12.49□□□□□ -0.41
UBFD1-205ENST00000566136 JAKMIP3Q5VZ66 844 aa12.49□□□□□ -0.41
UBFD1-205ENST00000566136 MRPL50Q8N5N7 158 aaKnown RBP12.49□□□□□ -0.41
UBFD1-205ENST00000566136 C8orf58Q8NAV2 365 aa12.49□□□□□ -0.41
UBFD1-205ENST00000566136 ZNF296Q8WUU4 475 aaPredicted RBP12.49□□□□□ -0.41
UBFD1-205ENST00000566136 STRBPQ96SI9 672 aaKnown RBP12.49□□□□□ -0.41
UBFD1-205ENST00000566136 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.49□□□□□ -0.41
UBFD1-205ENST00000566136 FBXO2Q9UK22 296 aaPredicted RBP12.49□□□□□ -0.41
UBFD1-205ENST00000566136 ERFEQ4G0M1 354 aa12.49□□□□□ -0.41
UBFD1-205ENST00000566136 MMS22LQ6ZRQ5 1243 aa12.49□□□□□ -0.41
UBFD1-205ENST00000566136 ZNF713Q8N859 430 aaPredicted RBP12.49□□□□□ -0.41
UBFD1-205ENST00000566136 ZNF454Q8N9F8 522 aa12.49□□□□□ -0.41
UBFD1-205ENST00000566136 IPCEF1Q8WWN9 437 aaPredicted RBP12.49□□□□□ -0.41
UBFD1-205ENST00000566136 PDGFDQ9GZP0 370 aaPredicted RBP12.49□□□□□ -0.41
UBFD1-205ENST00000566136 CCDC113Q9H0I3 377 aa12.49□□□□□ -0.41
UBFD1-205ENST00000566136 ANLNQ9NQW6 1124 aa12.49□□□□□ -0.41
UBFD1-205ENST00000566136 TRHDEQ9UKU6 1024 aa12.49□□□□□ -0.41
UBFD1-205ENST00000566136 OVOS2A0A0J9YW53 1432 aa12.49□□□□□ -0.41
UBFD1-205ENST00000566136 OVOS2Q6IE36 1432 aa12.49□□□□□ -0.41
UBFD1-205ENST00000566136 PMM2O15305 246 aa12.48□□□□□ -0.41
UBFD1-205ENST00000566136 EYA4O95677 639 aa12.48□□□□□ -0.41
UBFD1-205ENST00000566136 CASP2P42575 452 aa12.48□□□□□ -0.41
UBFD1-205ENST00000566136 STT3AP46977 705 aa12.48□□□□□ -0.41
UBFD1-205ENST00000566136 GTF2A2P52657 109 aa12.48□□□□□ -0.41
UBFD1-205ENST00000566136 WASHC5Q12768 1159 aa12.48□□□□□ -0.41
UBFD1-205ENST00000566136 COL9A2Q14055 689 aaPredicted RBP12.48□□□□□ -0.41
UBFD1-205ENST00000566136 TAF11Q15544 211 aa12.48□□□□□ -0.41
UBFD1-205ENST00000566136 TWISTNBQ3B726 338 aaPredicted RBP12.48□□□□□ -0.41
UBFD1-205ENST00000566136 GFOD2Q3B7J2 385 aa12.48□□□□□ -0.41
UBFD1-205ENST00000566136 ZNF354CQ86Y25 554 aa12.48□□□□□ -0.41
UBFD1-205ENST00000566136 EDEM1Q92611 657 aa12.48□□□□□ -0.41
UBFD1-205ENST00000566136 LMO7Q8WWI1 1683 aa12.48□□□□□ -0.41
UBFD1-205ENST00000566136 LMNB2Q03252 620 aa12.48□□□□□ -0.41
UBFD1-205ENST00000566136 HYIQ5T013 277 aa12.48□□□□□ -0.41
UBFD1-205ENST00000566136 C6orf118Q5T5N4 469 aa12.48□□□□□ -0.41
UBFD1-205ENST00000566136 OSBPL5Q9H0X9 879 aaPredicted RBP12.48□□□□□ -0.41
UBFD1-205ENST00000566136 PEAK1Q9H792 1746 aa12.47□□□□□ -0.41
UBFD1-205ENST00000566136 PIK3C2AO00443 1686 aa12.47□□□□□ -0.41
UBFD1-205ENST00000566136 SSRP1Q08945 709 aaKnown RBP12.47□□□□□ -0.41
UBFD1-205ENST00000566136 PERM1Q5SV97 790 aa12.47□□□□□ -0.41
UBFD1-205ENST00000566136 ZBTB46Q86UZ6 589 aa12.47□□□□□ -0.41
UBFD1-205ENST00000566136 PNMA8AQ86V59 439 aaPredicted RBP12.47□□□□□ -0.41
UBFD1-205ENST00000566136 ETFBKMTQ8IXQ9 262 aa12.47□□□□□ -0.41
UBFD1-205ENST00000566136 THAP3Q8WTV1 239 aaPredicted RBP12.47□□□□□ -0.41
UBFD1-205ENST00000566136 POF1BQ8WVV4 589 aa12.47□□□□□ -0.41
UBFD1-205ENST00000566136 JARID2Q92833 1246 aaPredicted RBP12.47□□□□□ -0.41
UBFD1-205ENST00000566136 ZSWIM6Q9HCJ5 1215 aa12.47□□□□□ -0.41
UBFD1-205ENST00000566136 EIF4A3P38919 411 aaKnown RBP12.47□□□□□ -0.41
UBFD1-205ENST00000566136 PABPC4Q13310 644 aaKnown RBP eCLIP12.47□□□□□ -0.41
UBFD1-205ENST00000566136 RASGRF1Q13972 1273 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms