RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 SCLT1Q96NL6 688 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 GSDMAQ96QA5 445 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 GREM2Q9H772 168 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 MCM9Q9NXL9 1143 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 PRKAB2O43741 272 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 NF2P35240 595 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 MAP2K1Q02750 393 aaPredicted RBP11.78□□□□□ -0.52
USB1-212ENST00000566082 B4GALNT4Q76KP1 1039 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 MB21D2Q8IYB1 491 aaPredicted RBP11.78□□□□□ -0.52
USB1-212ENST00000566082 CAPS2Q9BXY5 557 aa11.78□□□□□ -0.52
USB1-212ENST00000566082 FOXP1Q9H334 677 aaPredicted RBP11.78□□□□□ -0.52
USB1-212ENST00000566082 RBM28Q9NW13 759 aaKnown RBP11.78□□□□□ -0.52
USB1-212ENST00000566082 ARHGEF28Q8N1W1 1705 aaKnown RBP11.77□□□□□ -0.52
USB1-212ENST00000566082 TLDC2A0PJX2 215 aa11.77□□□□□ -0.52
USB1-212ENST00000566082 SMIM23A6NLE4 172 aa11.77□□□□□ -0.52
USB1-212ENST00000566082 FMNL1O95466 1100 aaPredicted RBP11.77□□□□□ -0.52
USB1-212ENST00000566082 TSPY3P0CV98 308 aa11.77□□□□□ -0.52
USB1-212ENST00000566082 TSPY8P0CW00 308 aa11.77□□□□□ -0.52
USB1-212ENST00000566082 IFNAR1P17181 557 aa11.77□□□□□ -0.52
USB1-212ENST00000566082 KCNJ6P48051 423 aa11.77□□□□□ -0.52
USB1-212ENST00000566082 MAP3K9P80192 1104 aa11.77□□□□□ -0.52
USB1-212ENST00000566082 CPLX4Q7Z7G2 160 aa11.77□□□□□ -0.52
USB1-212ENST00000566082 TSGA10Q9BZW7 698 aa11.77□□□□□ -0.52
USB1-212ENST00000566082 MRPL44Q9H9J2 332 aaKnown RBP11.77□□□□□ -0.52
USB1-212ENST00000566082 SUGCTQ9HAC7 445 aa11.77□□□□□ -0.52
USB1-212ENST00000566082 SAMM50Q9Y512 469 aa11.77□□□□□ -0.52
USB1-212ENST00000566082 PIK3C2BO00750 1634 aa11.77□□□□□ -0.52
USB1-212ENST00000566082 SRGAP2O75044 1071 aa11.77□□□□□ -0.53
USB1-212ENST00000566082 ADD2P35612 726 aa11.77□□□□□ -0.53
USB1-212ENST00000566082 GUCY2FP51841 1108 aa11.77□□□□□ -0.53
USB1-212ENST00000566082 CYP27A1Q02318 531 aa11.77□□□□□ -0.53
USB1-212ENST00000566082 FMR1Q06787 632 aaKnown RBP eCLIP11.77□□□□□ -0.53
USB1-212ENST00000566082 NBPF14Q5TI25 921 aa11.77□□□□□ -0.53
USB1-212ENST00000566082 JRKLQ9Y4A0 524 aa11.77□□□□□ -0.53
USB1-212ENST00000566082 CAPN7Q9Y6W3 813 aa11.77□□□□□ -0.53
USB1-212ENST00000566082 MROH7-TTC4A0A0A0MT08 1334 aa11.77□□□□□ -0.53
USB1-212ENST00000566082 TCHHQ07283 1943 aa11.77□□□□□ -0.53
USB1-212ENST00000566082 PTPREP23469 700 aa11.77□□□□□ -0.53
USB1-212ENST00000566082 PPARAQ07869 468 aa11.77□□□□□ -0.53
USB1-212ENST00000566082 SCARF1Q14162 830 aa11.77□□□□□ -0.53
USB1-212ENST00000566082 KLHL7Q8IXQ5 586 aa11.77□□□□□ -0.53
USB1-212ENST00000566082 RPGRIP1Q96KN7 1286 aa11.77□□□□□ -0.53
USB1-212ENST00000566082 NLRC4Q9NPP4 1024 aa11.77□□□□□ -0.53
USB1-212ENST00000566082 TCEAL9Q9UHQ7 104 aa11.77□□□□□ -0.53
USB1-212ENST00000566082 PPLO60437 1756 aa11.77□□□□□ -0.53
USB1-212ENST00000566082 DLC1Q96QB1 1528 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 IL2RBP14784 551 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 VSNL1P62760 191 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 RAPGEF1Q13905 1077 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 UBE3CQ15386 1083 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 FAM47AQ5JRC9 791 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 RRAGAQ7L523 313 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 ARFGAP2Q8N6H7 521 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 NUTM2BA6NNL0 878 aaPredicted RBP11.76□□□□□ -0.53
USB1-212ENST00000566082 NUTM2EB1AL46 878 aaPredicted RBP11.76□□□□□ -0.53
USB1-212ENST00000566082 NDUFA10O95299 355 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 TBC1D8O95759 1140 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 RPN1P04843 607 aaKnown RBP11.76□□□□□ -0.53
USB1-212ENST00000566082 KRT31Q15323 416 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 POTEDQ86YR6 584 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 REXO1L1PQ8IX06 675 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 GSPT2Q8IYD1 628 aaKnown RBP11.76□□□□□ -0.53
USB1-212ENST00000566082 NUP58Q9BVL2 599 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 ZNF446Q9NWS9 450 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 NIP7Q9Y221 180 aaKnown RBP eCLIP11.76□□□□□ -0.53
USB1-212ENST00000566082 SRPRBQ9Y5M8 271 aaKnown RBP11.76□□□□□ -0.53
USB1-212ENST00000566082 PLEKHG1Q9ULL1 1385 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 CDC42BPGQ6DT37 1551 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 B4DLN1 442 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 CIAO1O76071 339 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 CXCR5P32302 372 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 GBP2P32456 591 aaPredicted RBP11.76□□□□□ -0.53
USB1-212ENST00000566082 DYMQ7RTS9 669 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 UBLCP1Q8WVY7 318 aaPredicted RBP11.76□□□□□ -0.53
USB1-212ENST00000566082 ZNF287Q9HBT7 754 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 FEZ2Q9UHY8 353 aaPredicted RBP11.76□□□□□ -0.53
USB1-212ENST00000566082 AXIN2Q9Y2T1 843 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 PXDNLA1KZ92 1463 aa11.76□□□□□ -0.53
USB1-212ENST00000566082 EIF3CLB5ME19 914 aaKnown RBP11.75□□□□□ -0.53
USB1-212ENST00000566082 H7C1D1 291 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 H7C1W4 665 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 TRAF5O00463 557 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 C2orf54Q08AI8 447 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 PTPROQ16827 1216 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 TC2NQ8N9U0 490 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 PAGE5Q96GU1 130 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 EIF3CQ99613 913 aaKnown RBP11.75□□□□□ -0.53
USB1-212ENST00000566082 ANKIB1Q9P2G1 1089 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 GTPBP6O43824 516 aaPredicted RBP11.75□□□□□ -0.53
USB1-212ENST00000566082 PDE8AO60658 829 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 GNAQP50148 359 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 DNM2P50570 870 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 IFT20Q8IY31 132 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 PPANQ9NQ55 473 aaKnown RBP11.75□□□□□ -0.53
USB1-212ENST00000566082 PIH1D3Q9NQM4 214 aaKnown RBP11.75□□□□□ -0.53
USB1-212ENST00000566082 ZNF652Q9Y2D9 606 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 PCDH11XQ9BZA7 1347 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 PCDH11YQ9BZA8 1340 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 FAM170AA1A519 330 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 BUB1O43683 1085 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms