RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 COG2Q14746 738 aa23.85■■□□□ 1.41
CLN6-206ENST00000565471 LRRFIP1Q32MZ4 808 aaKnown RBP23.85■■□□□ 1.41
CLN6-206ENST00000565471 SBK1Q52WX2 424 aa23.85■■□□□ 1.41
CLN6-206ENST00000565471 OSBP2Q969R2 916 aa23.85■■□□□ 1.41
CLN6-206ENST00000565471 APBA2Q99767 749 aa23.85■■□□□ 1.41
CLN6-206ENST00000565471 CWC22Q9HCG8 908 aaKnown RBP23.85■■□□□ 1.41
CLN6-206ENST00000565471 HOXC10Q9NYD6 342 aa23.85■■□□□ 1.41
CLN6-206ENST00000565471 BTBD7Q9P203 1132 aa23.85■■□□□ 1.41
CLN6-206ENST00000565471 GSG1L2A8MUP6 293 aa23.84■■□□□ 1.41
CLN6-206ENST00000565471 ZKSCAN1P17029 563 aaPredicted RBP23.84■■□□□ 1.41
CLN6-206ENST00000565471 CLEC10AQ8IUN9 316 aa23.84■■□□□ 1.41
CLN6-206ENST00000565471 PI4K2BQ8TCG2 481 aa23.84■■□□□ 1.41
CLN6-206ENST00000565471 DPF3Q92784 378 aa23.84■■□□□ 1.41
CLN6-206ENST00000565471 H0YGN5 161 aa23.83■■□□□ 1.41
CLN6-206ENST00000565471 MAP2K5Q13163 448 aa23.83■■□□□ 1.41
CLN6-206ENST00000565471 ANKLE1Q8NAG6 615 aa23.83■■□□□ 1.41
CLN6-206ENST00000565471 TANGO6Q9C0B7 1094 aa23.83■■□□□ 1.41
CLN6-206ENST00000565471 VCPKMTQ9H867 229 aa23.83■■□□□ 1.41
CLN6-206ENST00000565471 KANSL2Q9H9L4 492 aa23.83■■□□□ 1.41
CLN6-206ENST00000565471 A0A0G2JMZ2 1700 aa23.83■■□□□ 1.41
CLN6-206ENST00000565471 RLFQ13129 1914 aa23.82■■□□□ 1.4
CLN6-206ENST00000565471 ROBO3Q96MS0 1386 aa23.82■■□□□ 1.4
CLN6-206ENST00000565471 SLC15A5A6NIM6 579 aa23.82■■□□□ 1.4
CLN6-206ENST00000565471 GPAA1O43292 621 aa23.82■■□□□ 1.4
CLN6-206ENST00000565471 PRKAR2AP13861 404 aaKnown RBP23.82■■□□□ 1.4
CLN6-206ENST00000565471 GNAT2P19087 354 aa23.82■■□□□ 1.4
CLN6-206ENST00000565471 HABP4Q5JVS0 413 aaKnown RBP23.82■■□□□ 1.4
CLN6-206ENST00000565471 KIAA1755Q5JYT7 1200 aa23.82■■□□□ 1.4
CLN6-206ENST00000565471 CRBNQ96SW2 442 aa23.82■■□□□ 1.4
CLN6-206ENST00000565471 WDR46O15213 610 aaKnown RBP23.81■■□□□ 1.4
CLN6-206ENST00000565471 PTPREP23469 700 aa23.81■■□□□ 1.4
CLN6-206ENST00000565471 MB21D1Q8N884 522 aa23.81■■□□□ 1.4
CLN6-206ENST00000565471 OTUD7AQ8TE49 926 aaPredicted RBP23.81■■□□□ 1.4
CLN6-206ENST00000565471 IVNS1ABPQ9Y6Y0 642 aa23.81■■□□□ 1.4
CLN6-206ENST00000565471 GREB1LQ9C091 1923 aaPredicted RBP23.8■■□□□ 1.4
CLN6-206ENST00000565471 EEF2P13639 858 aaKnown RBP23.8■■□□□ 1.4
CLN6-206ENST00000565471 MX1P20591 662 aa23.8■■□□□ 1.4
CLN6-206ENST00000565471 WDR78Q5VTH9 848 aa23.8■■□□□ 1.4
CLN6-206ENST00000565471 M0R2C6 588 aa23.79■■□□□ 1.4
CLN6-206ENST00000565471 HOXC6P09630 235 aa23.79■■□□□ 1.4
CLN6-206ENST00000565471 DSG3P32926 999 aa23.79■■□□□ 1.4
CLN6-206ENST00000565471 CACNB2Q08289 660 aaPredicted RBP23.79■■□□□ 1.4
CLN6-206ENST00000565471 GRB14Q14449 540 aa23.79■■□□□ 1.4
CLN6-206ENST00000565471 CCL14Q16627 93 aa23.79■■□□□ 1.4
CLN6-206ENST00000565471 SPICE1Q8N0Z3 855 aa23.79■■□□□ 1.4
CLN6-206ENST00000565471 SHCBP1Q8NEM2 672 aa23.79■■□□□ 1.4
CLN6-206ENST00000565471 EPB41L4AQ9HCS5 686 aaPredicted RBP23.79■■□□□ 1.4
CLN6-206ENST00000565471 SALL3Q9BXA9 1300 aa23.79■■□□□ 1.4
CLN6-206ENST00000565471 ZNF236Q9UL36 1845 aa23.78■■□□□ 1.4
CLN6-206ENST00000565471 FLOT1O75955 427 aa23.78■■□□□ 1.4
CLN6-206ENST00000565471 RASA1P20936 1047 aa23.78■■□□□ 1.4
CLN6-206ENST00000565471 NECAB2Q7Z6G3 386 aa23.78■■□□□ 1.4
CLN6-206ENST00000565471 PAWRQ96IZ0 340 aaKnown RBP23.78■■□□□ 1.4
CLN6-206ENST00000565471 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.78■■□□□ 1.4
CLN6-206ENST00000565471 MOV10L1Q9BXT6 1211 aaKnown RBP23.78■■□□□ 1.4
CLN6-206ENST00000565471 SPATC1LQ9H0A9 340 aa23.78■■□□□ 1.4
CLN6-206ENST00000565471 ZBTB47Q9UFB7 747 aaPredicted RBP23.78■■□□□ 1.4
CLN6-206ENST00000565471 OGDHLQ9ULD0 1010 aa23.78■■□□□ 1.4
CLN6-206ENST00000565471 NR2E3Q9Y5X4 410 aa23.78■■□□□ 1.4
CLN6-206ENST00000565471 PARP14Q460N5 1801 aa23.77■■□□□ 1.4
CLN6-206ENST00000565471 MINDY4BA8MYZ0 360 aa23.77■■□□□ 1.4
CLN6-206ENST00000565471 TDO2P48775 406 aa23.77■■□□□ 1.4
CLN6-206ENST00000565471 HDAC1Q13547 482 aaPredicted RBP23.77■■□□□ 1.4
CLN6-206ENST00000565471 FSD1Q9BTV5 496 aa23.77■■□□□ 1.4
CLN6-206ENST00000565471 GOPCQ9HD26 462 aa23.77■■□□□ 1.4
CLN6-206ENST00000565471 COLQQ9Y215 455 aaPredicted RBP23.77■■□□□ 1.4
CLN6-206ENST00000565471 PATL2C9JE40 543 aaKnown RBP23.76■■□□□ 1.39
CLN6-206ENST00000565471 STRNO43815 780 aa23.76■■□□□ 1.39
CLN6-206ENST00000565471 ATP2B2Q01814 1243 aa23.76■■□□□ 1.39
CLN6-206ENST00000565471 AAMPQ13685 434 aa23.76■■□□□ 1.39
CLN6-206ENST00000565471 DIS3LQ8TF46 1054 aaKnown RBP23.76■■□□□ 1.39
CLN6-206ENST00000565471 MKNK2Q9HBH9 465 aa23.76■■□□□ 1.39
CLN6-206ENST00000565471 ZNF287Q9HBT7 754 aa23.76■■□□□ 1.39
CLN6-206ENST00000565471 APPP05067 770 aa23.75■■□□□ 1.39
CLN6-206ENST00000565471 MNX1P50219 401 aaPredicted RBP23.75■■□□□ 1.39
CLN6-206ENST00000565471 ZMYM1Q5SVZ6 1142 aa23.75■■□□□ 1.39
CLN6-206ENST00000565471 ANKRD45Q5TZF3 282 aa23.75■■□□□ 1.39
CLN6-206ENST00000565471 MFSD14CQ5VZR4 134 aa23.75■■□□□ 1.39
CLN6-206ENST00000565471 ATG4CQ96DT6 458 aa23.75■■□□□ 1.39
CLN6-206ENST00000565471 NACAP1Q9BZK3 213 aa23.75■■□□□ 1.39
CLN6-206ENST00000565471 ADAMTS5Q9UNA0 930 aa23.75■■□□□ 1.39
CLN6-206ENST00000565471 ERCC3P19447 782 aa23.74■■□□□ 1.39
CLN6-206ENST00000565471 IFNL3Q8IZI9 196 aa23.74■■□□□ 1.39
CLN6-206ENST00000565471 YTHDC1Q96MU7 727 aaKnown RBP23.74■■□□□ 1.39
CLN6-206ENST00000565471 SEC62Q99442 399 aaKnown RBP23.74■■□□□ 1.39
CLN6-206ENST00000565471 NBPF3Q9H094 633 aa23.74■■□□□ 1.39
CLN6-206ENST00000565471 MROH8Q9H579 483 aa23.74■■□□□ 1.39
CLN6-206ENST00000565471 FLRT1Q9NZU1 646 aa23.74■■□□□ 1.39
CLN6-206ENST00000565471 NYAP2Q9P242 653 aa23.74■■□□□ 1.39
CLN6-206ENST00000565471 CEP290O15078 2479 aa23.73■■□□□ 1.39
CLN6-206ENST00000565471 EVI5O60447 810 aa23.73■■□□□ 1.39
CLN6-206ENST00000565471 CCND3P30281 292 aaPredicted RBP23.73■■□□□ 1.39
CLN6-206ENST00000565471 NPLOC4Q8TAT6 608 aa23.73■■□□□ 1.39
CLN6-206ENST00000565471 STAP2Q9UGK3 403 aa23.73■■□□□ 1.39
CLN6-206ENST00000565471 IGHA2P01877 340 aa23.72■■□□□ 1.39
CLN6-206ENST00000565471 ADORA2AP29274 412 aa23.72■■□□□ 1.39
CLN6-206ENST00000565471 PLS1Q14651 629 aa23.72■■□□□ 1.39
CLN6-206ENST00000565471 LHX8Q68G74 356 aa23.72■■□□□ 1.39
CLN6-206ENST00000565471 ABRAQ8N0Z2 381 aa23.72■■□□□ 1.39
CLN6-206ENST00000565471 STK11IPQ8N1F8 1099 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms