RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 ZFYP08048 801 aaPredicted RBP18.8■□□□□ 0.6
CDH3-204ENST00000565453 CCNA1P78396 465 aa18.8■□□□□ 0.6
CDH3-204ENST00000565453 COG2Q14746 738 aa18.8■□□□□ 0.6
CDH3-204ENST00000565453 ARHGEF10LQ9HCE6 1279 aa18.8■□□□□ 0.6
CDH3-204ENST00000565453 EPB41L4AQ9HCS5 686 aaPredicted RBP18.8■□□□□ 0.6
CDH3-204ENST00000565453 GREB1LQ9C091 1923 aaPredicted RBP18.8■□□□□ 0.6
CDH3-204ENST00000565453 ROBO3Q96MS0 1386 aa18.8■□□□□ 0.6
CDH3-204ENST00000565453 ERC2O15083 957 aa18.79■□□□□ 0.6
CDH3-204ENST00000565453 GPAA1O43292 621 aa18.79■□□□□ 0.6
CDH3-204ENST00000565453 GLRX3O76003 335 aaKnown RBP18.79■□□□□ 0.6
CDH3-204ENST00000565453 TFRCP02786 760 aaKnown RBP18.79■□□□□ 0.6
CDH3-204ENST00000565453 RGS2P41220 211 aa18.79■□□□□ 0.6
CDH3-204ENST00000565453 CCL14Q16627 93 aa18.79■□□□□ 0.6
CDH3-204ENST00000565453 CCAR1Q8IX12 1150 aaKnown RBP18.79■□□□□ 0.6
CDH3-204ENST00000565453 TRMT44Q8IYL2 757 aaKnown RBP18.79■□□□□ 0.6
CDH3-204ENST00000565453 LPAR1Q92633 364 aa18.79■□□□□ 0.6
CDH3-204ENST00000565453 APBA2Q99767 749 aa18.79■□□□□ 0.6
CDH3-204ENST00000565453 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.79■□□□□ 0.6
CDH3-204ENST00000565453 VCPKMTQ9H867 229 aa18.79■□□□□ 0.6
CDH3-204ENST00000565453 HMX1Q9NP08 348 aaPredicted RBP18.79■□□□□ 0.6
CDH3-204ENST00000565453 H0YGN5 161 aa18.78■□□□□ 0.6
CDH3-204ENST00000565453 PTPREP23469 700 aa18.78■□□□□ 0.6
CDH3-204ENST00000565453 MAP2K5Q13163 448 aa18.78■□□□□ 0.6
CDH3-204ENST00000565453 HABP4Q5JVS0 413 aaKnown RBP18.78■□□□□ 0.6
CDH3-204ENST00000565453 HTATIP2Q9BUP3 242 aa18.78■□□□□ 0.6
CDH3-204ENST00000565453 TANGO6Q9C0B7 1094 aa18.78■□□□□ 0.6
CDH3-204ENST00000565453 SH2D4AQ9H788 454 aa18.78■□□□□ 0.6
CDH3-204ENST00000565453 HOXC10Q9NYD6 342 aa18.78■□□□□ 0.6
CDH3-204ENST00000565453 SLC15A5A6NIM6 579 aa18.77■□□□□ 0.6
CDH3-204ENST00000565453 EEF2P13639 858 aaKnown RBP18.77■□□□□ 0.6
CDH3-204ENST00000565453 PRKAR2AP13861 404 aaKnown RBP18.77■□□□□ 0.6
CDH3-204ENST00000565453 ZKSCAN1P17029 563 aaPredicted RBP18.77■□□□□ 0.6
CDH3-204ENST00000565453 MX1P20591 662 aa18.77■□□□□ 0.6
CDH3-204ENST00000565453 RASA1P20936 1047 aa18.77■□□□□ 0.6
CDH3-204ENST00000565453 DSG3P32926 999 aa18.77■□□□□ 0.6
CDH3-204ENST00000565453 CACNB2Q08289 660 aaPredicted RBP18.77■□□□□ 0.6
CDH3-204ENST00000565453 HDAC1Q13547 482 aaPredicted RBP18.77■□□□□ 0.6
CDH3-204ENST00000565453 KANSL2Q9H9L4 492 aa18.77■□□□□ 0.6
CDH3-204ENST00000565453 PARP14Q460N5 1801 aa18.77■□□□□ 0.59
CDH3-204ENST00000565453 WDR46O15213 610 aaKnown RBP18.76■□□□□ 0.59
CDH3-204ENST00000565453 HOXC6P09630 235 aa18.76■□□□□ 0.59
CDH3-204ENST00000565453 GNAT2P19087 354 aa18.76■□□□□ 0.59
CDH3-204ENST00000565453 MNX1P50219 401 aaPredicted RBP18.76■□□□□ 0.59
CDH3-204ENST00000565453 GRB14Q14449 540 aa18.76■□□□□ 0.59
CDH3-204ENST00000565453 SPICE1Q8N0Z3 855 aa18.76■□□□□ 0.59
CDH3-204ENST00000565453 ANKLE1Q8NAG6 615 aa18.76■□□□□ 0.59
CDH3-204ENST00000565453 DPF3Q92784 378 aa18.76■□□□□ 0.59
CDH3-204ENST00000565453 YTHDC1Q96MU7 727 aaKnown RBP18.76■□□□□ 0.59
CDH3-204ENST00000565453 SEC62Q99442 399 aaKnown RBP18.76■□□□□ 0.59
CDH3-204ENST00000565453 MOV10L1Q9BXT6 1211 aaKnown RBP18.76■□□□□ 0.59
CDH3-204ENST00000565453 MINDY4BA8MYZ0 360 aa18.75■□□□□ 0.59
CDH3-204ENST00000565453 LRRFIP1Q32MZ4 808 aaKnown RBP18.75■□□□□ 0.59
CDH3-204ENST00000565453 ZMYM1Q5SVZ6 1142 aa18.75■□□□□ 0.59
CDH3-204ENST00000565453 MB21D1Q8N884 522 aa18.75■□□□□ 0.59
CDH3-204ENST00000565453 DIS3LQ8TF46 1054 aaKnown RBP18.75■□□□□ 0.59
CDH3-204ENST00000565453 ATG4CQ96DT6 458 aa18.75■□□□□ 0.59
CDH3-204ENST00000565453 PAWRQ96IZ0 340 aaKnown RBP18.75■□□□□ 0.59
CDH3-204ENST00000565453 SPATC1LQ9H0A9 340 aa18.75■□□□□ 0.59
CDH3-204ENST00000565453 CWC22Q9HCG8 908 aaKnown RBP18.75■□□□□ 0.59
CDH3-204ENST00000565453 FLRT1Q9NZU1 646 aa18.75■□□□□ 0.59
CDH3-204ENST00000565453 OGDHLQ9ULD0 1010 aa18.75■□□□□ 0.59
CDH3-204ENST00000565453 ZNF236Q9UL36 1845 aa18.74■□□□□ 0.59
CDH3-204ENST00000565453 PATL2C9JE40 543 aaKnown RBP18.74■□□□□ 0.59
CDH3-204ENST00000565453 FLOT1O75955 427 aa18.74■□□□□ 0.59
CDH3-204ENST00000565453 IGHA2P01877 340 aa18.74■□□□□ 0.59
CDH3-204ENST00000565453 ANKRD45Q5TZF3 282 aa18.74■□□□□ 0.59
CDH3-204ENST00000565453 WDR78Q5VTH9 848 aa18.74■□□□□ 0.59
CDH3-204ENST00000565453 IFNL3Q8IZI9 196 aa18.74■□□□□ 0.59
CDH3-204ENST00000565453 SHCBP1Q8NEM2 672 aa18.74■□□□□ 0.59
CDH3-204ENST00000565453 NPLOC4Q8TAT6 608 aa18.74■□□□□ 0.59
CDH3-204ENST00000565453 FSD1Q9BTV5 496 aa18.74■□□□□ 0.59
CDH3-204ENST00000565453 STAP2Q9UGK3 403 aa18.74■□□□□ 0.59
CDH3-204ENST00000565453 ADAMTS5Q9UNA0 930 aa18.74■□□□□ 0.59
CDH3-204ENST00000565453 COLQQ9Y215 455 aaPredicted RBP18.74■□□□□ 0.59
CDH3-204ENST00000565453 IGKV6D-41A0A0C4DH26 115 aa18.73■□□□□ 0.59
CDH3-204ENST00000565453 CCND3P30281 292 aaPredicted RBP18.73■□□□□ 0.59
CDH3-204ENST00000565453 TDO2P48775 406 aa18.73■□□□□ 0.59
CDH3-204ENST00000565453 ATP2B2Q01814 1243 aa18.73■□□□□ 0.59
CDH3-204ENST00000565453 STK11IPQ8N1F8 1099 aa18.73■□□□□ 0.59
CDH3-204ENST00000565453 IVNS1ABPQ9Y6Y0 642 aa18.73■□□□□ 0.59
CDH3-204ENST00000565453 ALPK3Q96L96 1907 aa18.72■□□□□ 0.59
CDH3-204ENST00000565453 ERCC3P19447 782 aa18.72■□□□□ 0.59
CDH3-204ENST00000565453 LHX8Q68G74 356 aa18.72■□□□□ 0.59
CDH3-204ENST00000565453 NECAB2Q7Z6G3 386 aa18.72■□□□□ 0.59
CDH3-204ENST00000565453 MKNK2Q9HBH9 465 aa18.72■□□□□ 0.59
CDH3-204ENST00000565453 FBXO28Q9NVF7 368 aa18.72■□□□□ 0.59
CDH3-204ENST00000565453 NYAP2Q9P242 653 aa18.72■□□□□ 0.59
CDH3-204ENST00000565453 FOXP2O15409 715 aa18.71■□□□□ 0.59
CDH3-204ENST00000565453 APPP05067 770 aa18.71■□□□□ 0.59
CDH3-204ENST00000565453 PDE1AP54750 535 aa18.71■□□□□ 0.59
CDH3-204ENST00000565453 AAMPQ13685 434 aa18.71■□□□□ 0.59
CDH3-204ENST00000565453 TMEM132BQ14DG7 1078 aa18.71■□□□□ 0.59
CDH3-204ENST00000565453 GOPCQ9HD26 462 aa18.71■□□□□ 0.59
CDH3-204ENST00000565453 STRNO43815 780 aa18.7■□□□□ 0.58
CDH3-204ENST00000565453 ADORA2AP29274 412 aa18.7■□□□□ 0.58
CDH3-204ENST00000565453 FAM83BQ5T0W9 1011 aa18.7■□□□□ 0.58
CDH3-204ENST00000565453 MFSD14CQ5VZR4 134 aa18.7■□□□□ 0.58
CDH3-204ENST00000565453 REPS2Q8NFH8 660 aa18.7■□□□□ 0.58
CDH3-204ENST00000565453 PPP1R9AQ9ULJ8 1098 aa18.7■□□□□ 0.58
CDH3-204ENST00000565453 NR2E3Q9Y5X4 410 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms