RNA–Protein interactions for RNA: ENST00000565377.1

RPUSD1-205, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-205ENST00000565377 NEK1Q96PY6 1258 aa23.62■■□□□ 1.37
RPUSD1-205ENST00000565377 PARK7Q99497 189 aaKnown RBP23.62■■□□□ 1.37
RPUSD1-205ENST00000565377 PTPN18Q99952 460 aa23.62■■□□□ 1.37
RPUSD1-205ENST00000565377 CFHR5Q9BXR6 569 aa23.62■■□□□ 1.37
RPUSD1-205ENST00000565377 UPF2Q9HAU5 1272 aaKnown RBP23.62■■□□□ 1.37
RPUSD1-205ENST00000565377 ZFYVE28Q9HCC9 887 aa23.62■■□□□ 1.37
RPUSD1-205ENST00000565377 EMILIN3Q9NT22 766 aa23.62■■□□□ 1.37
RPUSD1-205ENST00000565377 WBP1LQ9NX94 342 aa23.62■■□□□ 1.37
RPUSD1-205ENST00000565377 PDHXO00330 501 aa23.61■■□□□ 1.37
RPUSD1-205ENST00000565377 IGF2BP3O00425 579 aaKnown RBP eCLIP23.61■■□□□ 1.37
RPUSD1-205ENST00000565377 WDR46O15213 610 aaKnown RBP23.61■■□□□ 1.37
RPUSD1-205ENST00000565377 HOXA7P31268 230 aaPredicted RBP23.61■■□□□ 1.37
RPUSD1-205ENST00000565377 MOGSQ13724 837 aa23.61■■□□□ 1.37
RPUSD1-205ENST00000565377 ZYXQ15942 572 aaKnown RBP23.61■■□□□ 1.37
RPUSD1-205ENST00000565377 ANKS1AQ92625 1134 aa23.61■■□□□ 1.37
RPUSD1-205ENST00000565377 USP17L15C9J2P7 530 aa23.6■■□□□ 1.37
RPUSD1-205ENST00000565377 USP17L13C9JLJ4 530 aa23.6■■□□□ 1.37
RPUSD1-205ENST00000565377 USP17L11C9JVI0 530 aa23.6■■□□□ 1.37
RPUSD1-205ENST00000565377 USP17L18D6R9N7 530 aa23.6■■□□□ 1.37
RPUSD1-205ENST00000565377 USP17L22D6RA61 530 aa23.6■■□□□ 1.37
RPUSD1-205ENST00000565377 USP17L17D6RBQ6 530 aa23.6■■□□□ 1.37
RPUSD1-205ENST00000565377 USP17L19D6RCP7 530 aa23.6■■□□□ 1.37
RPUSD1-205ENST00000565377 USP17L20D6RJB6 530 aa23.6■■□□□ 1.37
RPUSD1-205ENST00000565377 ANAPC15P60006 121 aa23.6■■□□□ 1.37
RPUSD1-205ENST00000565377 USP17L24Q0WX57 530 aa23.6■■□□□ 1.37
RPUSD1-205ENST00000565377 TAF1CQ15572 869 aaPredicted RBP23.6■■□□□ 1.37
RPUSD1-205ENST00000565377 GPAT2Q6NUI2 795 aa23.6■■□□□ 1.37
RPUSD1-205ENST00000565377 CLEC10AQ8IUN9 316 aa23.6■■□□□ 1.37
RPUSD1-205ENST00000565377 TMTC2Q8N394 836 aa23.6■■□□□ 1.37
RPUSD1-205ENST00000565377 GTF3C2Q8WUA4 911 aaPredicted RBP23.6■■□□□ 1.37
RPUSD1-205ENST00000565377 TMEM87BQ96K49 555 aa23.6■■□□□ 1.37
RPUSD1-205ENST00000565377 RNF186Q9NXI6 227 aa23.6■■□□□ 1.37
RPUSD1-205ENST00000565377 WDR19Q8NEZ3 1342 aa23.59■■□□□ 1.37
RPUSD1-205ENST00000565377 F5H6K3 240 aa23.59■■□□□ 1.37
RPUSD1-205ENST00000565377 RAD21O60216 631 aa23.59■■□□□ 1.37
RPUSD1-205ENST00000565377 VCAM1P19320 739 aa23.59■■□□□ 1.37
RPUSD1-205ENST00000565377 IRX3P78415 501 aaPredicted RBP23.59■■□□□ 1.37
RPUSD1-205ENST00000565377 KLRC3Q07444 240 aa23.59■■□□□ 1.37
RPUSD1-205ENST00000565377 IFIT1BQ5T764 474 aaKnown RBP23.59■■□□□ 1.37
RPUSD1-205ENST00000565377 STOX1Q6ZVD7 989 aa23.59■■□□□ 1.37
RPUSD1-205ENST00000565377 MB21D2Q8IYB1 491 aaPredicted RBP23.59■■□□□ 1.37
RPUSD1-205ENST00000565377 FAM43AQ8N2R8 423 aa23.59■■□□□ 1.37
RPUSD1-205ENST00000565377 KAT14Q9H8E8 782 aa23.59■■□□□ 1.37
RPUSD1-205ENST00000565377 TNKSO95271 1327 aa23.59■■□□□ 1.37
RPUSD1-205ENST00000565377 IFIT3O14879 490 aaKnown RBP23.58■■□□□ 1.37
RPUSD1-205ENST00000565377 NMT2O60551 498 aa23.58■■□□□ 1.37
RPUSD1-205ENST00000565377 SNX14Q9Y5W7 946 aa23.58■■□□□ 1.37
RPUSD1-205ENST00000565377 TRPA1O75762 1119 aa23.57■■□□□ 1.36
RPUSD1-205ENST00000565377 WTAPQ15007 396 aa23.57■■□□□ 1.36
RPUSD1-205ENST00000565377 TREML2Q5T2D2 321 aa23.57■■□□□ 1.36
RPUSD1-205ENST00000565377 DHX32Q7L7V1 743 aaKnown RBP23.57■■□□□ 1.36
RPUSD1-205ENST00000565377 RASEFQ8IZ41 740 aa23.57■■□□□ 1.36
RPUSD1-205ENST00000565377 ENAHQ8N8S7 591 aaPredicted RBP23.57■■□□□ 1.36
RPUSD1-205ENST00000565377 SMCR8Q8TEV9 937 aaPredicted RBP23.57■■□□□ 1.36
RPUSD1-205ENST00000565377 GMCL1Q96IK5 515 aa23.57■■□□□ 1.36
RPUSD1-205ENST00000565377 TMEM47Q9BQJ4 181 aa23.57■■□□□ 1.36
RPUSD1-205ENST00000565377 ZKSCAN3Q9BRR0 538 aa23.57■■□□□ 1.36
RPUSD1-205ENST00000565377 RPAP3Q9H6T3 665 aaPredicted RBP23.57■■□□□ 1.36
RPUSD1-205ENST00000565377 TAF6LQ9Y6J9 622 aa23.57■■□□□ 1.36
RPUSD1-205ENST00000565377 LOC285556D6RIA3 1793 aa23.57■■□□□ 1.36
RPUSD1-205ENST00000565377 PRC1O43663 620 aa23.56■■□□□ 1.36
RPUSD1-205ENST00000565377 NOM1Q5C9Z4 860 aaKnown RBP23.56■■□□□ 1.36
RPUSD1-205ENST00000565377 TMEM67Q5HYA8 995 aa23.56■■□□□ 1.36
RPUSD1-205ENST00000565377 SLFN13Q68D06 897 aa23.56■■□□□ 1.36
RPUSD1-205ENST00000565377 RCSD1Q6JBY9 416 aa23.56■■□□□ 1.36
RPUSD1-205ENST00000565377 BLOC1S2Q6QNY1 142 aa23.56■■□□□ 1.36
RPUSD1-205ENST00000565377 CYB5R4Q7L1T6 521 aa23.56■■□□□ 1.36
RPUSD1-205ENST00000565377 LRRC47Q8N1G4 583 aaKnown RBP23.56■■□□□ 1.36
RPUSD1-205ENST00000565377 HOXC10Q9NYD6 342 aa23.56■■□□□ 1.36
RPUSD1-205ENST00000565377 PTPRFP10586 1907 aa23.56■■□□□ 1.36
RPUSD1-205ENST00000565377 NDUFB10O96000 172 aa23.55■■□□□ 1.36
RPUSD1-205ENST00000565377 SLC1A4P43007 532 aa23.55■■□□□ 1.36
RPUSD1-205ENST00000565377 GCLCP48506 637 aaPredicted RBP23.55■■□□□ 1.36
RPUSD1-205ENST00000565377 CATSPERGQ6ZRH7 1159 aa23.55■■□□□ 1.36
RPUSD1-205ENST00000565377 SPICE1Q8N0Z3 855 aa23.55■■□□□ 1.36
RPUSD1-205ENST00000565377 DCAF4Q8WV16 495 aa23.55■■□□□ 1.36
RPUSD1-205ENST00000565377 JAKMIP1Q96N16 626 aaKnown RBP23.55■■□□□ 1.36
RPUSD1-205ENST00000565377 TM6SF1Q9BZW5 370 aa23.55■■□□□ 1.36
RPUSD1-205ENST00000565377 TANGO6Q9C0B7 1094 aa23.55■■□□□ 1.36
RPUSD1-205ENST00000565377 MYPNQ86TC9 1320 aa23.55■■□□□ 1.36
RPUSD1-205ENST00000565377 PCNTO95613 3336 aa23.54■■□□□ 1.36
RPUSD1-205ENST00000565377 TLR2O60603 784 aa23.54■■□□□ 1.36
RPUSD1-205ENST00000565377 PNMA1Q8ND90 353 aa23.54■■□□□ 1.36
RPUSD1-205ENST00000565377 ASCC2Q9H1I8 757 aaPredicted RBP23.54■■□□□ 1.36
RPUSD1-205ENST00000565377 BMP3P12645 472 aa23.53■■□□□ 1.36
RPUSD1-205ENST00000565377 LIFRP42702 1097 aa23.53■■□□□ 1.36
RPUSD1-205ENST00000565377 FGD1P98174 961 aa23.53■■□□□ 1.36
RPUSD1-205ENST00000565377 CRHR2Q13324 411 aa23.53■■□□□ 1.36
RPUSD1-205ENST00000565377 COG2Q14746 738 aa23.53■■□□□ 1.36
RPUSD1-205ENST00000565377 SEC23AQ15436 765 aa23.53■■□□□ 1.36
RPUSD1-205ENST00000565377 FEM1BQ9UK73 627 aa23.53■■□□□ 1.36
RPUSD1-205ENST00000565377 HSPA1AP0DMV8 641 aaKnown RBP23.52■■□□□ 1.36
RPUSD1-205ENST00000565377 HSPA1BP0DMV9 641 aaKnown RBP23.52■■□□□ 1.36
RPUSD1-205ENST00000565377 CTCFP49711 727 aaPredicted RBP23.52■■□□□ 1.36
RPUSD1-205ENST00000565377 DGKZQ13574 1117 aa23.52■■□□□ 1.36
RPUSD1-205ENST00000565377 ADCK5Q3MIX3 580 aa23.52■■□□□ 1.36
RPUSD1-205ENST00000565377 GPATCH4Q5T3I0 446 aaKnown RBP23.52■■□□□ 1.36
RPUSD1-205ENST00000565377 CATIPQ7Z7H3 387 aa23.52■■□□□ 1.36
RPUSD1-205ENST00000565377 IGDCC4Q8TDY8 1250 aa23.52■■□□□ 1.36
RPUSD1-205ENST00000565377 CHURC1Q8WUH1 139 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms