RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 FAM76AQ8TAV0 307 aa18.37■□□□□ 0.53
LINC00554-201ENST00000564841 PANX2Q96RD6 677 aa18.37■□□□□ 0.53
LINC00554-201ENST00000564841 GOLGA6AQ9NYA3 693 aa18.37■□□□□ 0.53
LINC00554-201ENST00000564841 NIP7Q9Y221 180 aaKnown RBP eCLIP18.37■□□□□ 0.53
LINC00554-201ENST00000564841 A0A1B0GTH6 734 aa18.37■□□□□ 0.53
LINC00554-201ENST00000564841 GNGT1P63211 74 aa18.37■□□□□ 0.53
LINC00554-201ENST00000564841 AMPD2Q01433 879 aa18.37■□□□□ 0.53
LINC00554-201ENST00000564841 SUSD4Q5VX71 490 aa18.37■□□□□ 0.53
LINC00554-201ENST00000564841 COG1Q8WTW3 980 aa18.37■□□□□ 0.53
LINC00554-201ENST00000564841 ZNF185O15231 689 aa18.36■□□□□ 0.53
LINC00554-201ENST00000564841 TDO2P48775 406 aa18.36■□□□□ 0.53
LINC00554-201ENST00000564841 USP14P54578 494 aa18.36■□□□□ 0.53
LINC00554-201ENST00000564841 ANTXR2P58335 489 aa18.36■□□□□ 0.53
LINC00554-201ENST00000564841 RRP36Q96EU6 259 aaKnown RBP18.36■□□□□ 0.53
LINC00554-201ENST00000564841 MFAP3LO75121 409 aa18.36■□□□□ 0.53
LINC00554-201ENST00000564841 CD44P16070 742 aaKnown RBP18.36■□□□□ 0.53
LINC00554-201ENST00000564841 WHAMMP3Q1A5X7 153 aa18.36■□□□□ 0.53
LINC00554-201ENST00000564841 INTS5Q6P9B9 1019 aaKnown RBP18.36■□□□□ 0.53
LINC00554-201ENST00000564841 ENOX1Q8TC92 643 aaKnown RBP18.36■□□□□ 0.53
LINC00554-201ENST00000564841 CHP1Q99653 195 aa18.36■□□□□ 0.53
LINC00554-201ENST00000564841 CRACR2AQ9BSW2 395 aa18.36■□□□□ 0.53
LINC00554-201ENST00000564841 ITGB4P16144 1822 aa18.36■□□□□ 0.53
LINC00554-201ENST00000564841 ANKRD18BA2A2Z9 1011 aa18.36■□□□□ 0.53
LINC00554-201ENST00000564841 WDR93Q6P2C0 686 aa18.36■□□□□ 0.53
LINC00554-201ENST00000564841 SELENOOQ9BVL4 669 aa18.36■□□□□ 0.53
LINC00554-201ENST00000564841 FOXP2O15409 715 aa18.35■□□□□ 0.53
LINC00554-201ENST00000564841 ATP1A1P05023 1023 aaKnown RBP18.35■□□□□ 0.53
LINC00554-201ENST00000564841 CTSWP56202 376 aa18.35■□□□□ 0.53
LINC00554-201ENST00000564841 COL16A1Q07092 1604 aaPredicted RBP18.35■□□□□ 0.53
LINC00554-201ENST00000564841 H0YHG0 523 aa18.35■□□□□ 0.53
LINC00554-201ENST00000564841 IL6STP40189 918 aaPredicted RBP18.35■□□□□ 0.53
LINC00554-201ENST00000564841 AFMP43652 599 aa18.35■□□□□ 0.53
LINC00554-201ENST00000564841 MEX3CQ5U5Q3 659 aaKnown RBP18.35■□□□□ 0.53
LINC00554-201ENST00000564841 DSCC1Q9BVC3 393 aa18.35■□□□□ 0.53
LINC00554-201ENST00000564841 LAMB4A4D0S4 1761 aa18.35■□□□□ 0.53
LINC00554-201ENST00000564841 COL14A1Q05707 1796 aaKnown RBP18.35■□□□□ 0.53
LINC00554-201ENST00000564841 PHLPP1O60346 1717 aa18.35■□□□□ 0.53
LINC00554-201ENST00000564841 GRIN2DO15399 1336 aa18.34■□□□□ 0.53
LINC00554-201ENST00000564841 EZH2Q15910 746 aaKnown RBP18.34■□□□□ 0.53
LINC00554-201ENST00000564841 STAMQ92783 540 aa18.34■□□□□ 0.53
LINC00554-201ENST00000564841 CAPS2Q9BXY5 557 aa18.34■□□□□ 0.53
LINC00554-201ENST00000564841 IQSEC3Q9UPP2 1182 aaPredicted RBP18.34■□□□□ 0.53
LINC00554-201ENST00000564841 CMTR1Q8N1G2 835 aaKnown RBP18.34■□□□□ 0.53
LINC00554-201ENST00000564841 UBR2Q8IWV8 1755 aa18.34■□□□□ 0.53
LINC00554-201ENST00000564841 SHOX2O60902 331 aaPredicted RBP18.33■□□□□ 0.53
LINC00554-201ENST00000564841 IDH1O75874 414 aaKnown RBP18.33■□□□□ 0.53
LINC00554-201ENST00000564841 PDCLQ13371 301 aa18.33■□□□□ 0.53
LINC00554-201ENST00000564841 MICU3Q86XE3 530 aa18.33■□□□□ 0.53
LINC00554-201ENST00000564841 SH3TC1Q8TE82 1336 aa18.33■□□□□ 0.53
LINC00554-201ENST00000564841 PPP6R2O75170 966 aa18.33■□□□□ 0.52
LINC00554-201ENST00000564841 ATP1A2P50993 1020 aa18.33■□□□□ 0.52
LINC00554-201ENST00000564841 MORC3Q14149 939 aa18.33■□□□□ 0.52
LINC00554-201ENST00000564841 KIRREL3Q8IZU9 778 aa18.33■□□□□ 0.52
LINC00554-201ENST00000564841 HDAC7Q8WUI4 952 aa18.33■□□□□ 0.52
LINC00554-201ENST00000564841 PDE2AO00408 941 aaPredicted RBP18.33■□□□□ 0.52
LINC00554-201ENST00000564841 ACTN3Q08043 901 aaPredicted RBP18.33■□□□□ 0.52
LINC00554-201ENST00000564841 TRIM28Q13263 835 aaKnown RBP18.33■□□□□ 0.52
LINC00554-201ENST00000564841 SH2D3CQ8N5H7 860 aa18.33■□□□□ 0.52
LINC00554-201ENST00000564841 CTCFLQ8NI51 663 aaPredicted RBP18.33■□□□□ 0.52
LINC00554-201ENST00000564841 CDCA7Q9BWT1 371 aaPredicted RBP18.33■□□□□ 0.52
LINC00554-201ENST00000564841 HELLSQ9NRZ9 838 aa18.33■□□□□ 0.52
LINC00554-201ENST00000564841 USP21Q9UK80 565 aa18.33■□□□□ 0.52
LINC00554-201ENST00000564841 REXO2Q9Y3B8 237 aaKnown RBP18.33■□□□□ 0.52
LINC00554-201ENST00000564841 KCTD16Q68DU8 428 aa18.32■□□□□ 0.52
LINC00554-201ENST00000564841 GBP6Q6ZN66 633 aa18.32■□□□□ 0.52
LINC00554-201ENST00000564841 ARL8AQ96BM9 186 aa18.32■□□□□ 0.52
LINC00554-201ENST00000564841 VPS16Q9H269 839 aa18.32■□□□□ 0.52
LINC00554-201ENST00000564841 ADD3Q9UEY8 706 aaKnown RBP18.32■□□□□ 0.52
LINC00554-201ENST00000564841 GOLGA6BA6NDN3 693 aa18.32■□□□□ 0.52
LINC00554-201ENST00000564841 RALYLQ86SE5 291 aaKnown RBP18.32■□□□□ 0.52
LINC00554-201ENST00000564841 JMYQ8N9B5 988 aa18.32■□□□□ 0.52
LINC00554-201ENST00000564841 CENPHQ9H3R5 247 aa18.32■□□□□ 0.52
LINC00554-201ENST00000564841 VIPAS39Q9H9C1 493 aa18.32■□□□□ 0.52
LINC00554-201ENST00000564841 LTBP4Q8N2S1 1624 aa18.32■□□□□ 0.52
LINC00554-201ENST00000564841 ZEB2O60315 1214 aa18.31■□□□□ 0.52
LINC00554-201ENST00000564841 C2orf54Q08AI8 447 aa18.31■□□□□ 0.52
LINC00554-201ENST00000564841 MAP9Q49MG5 647 aa18.31■□□□□ 0.52
LINC00554-201ENST00000564841 MLKLQ8NB16 471 aa18.31■□□□□ 0.52
LINC00554-201ENST00000564841 EIF3HO15372 352 aaKnown RBP eCLIP18.31■□□□□ 0.52
LINC00554-201ENST00000564841 ZKSCAN3Q9BRR0 538 aa18.31■□□□□ 0.52
LINC00554-201ENST00000564841 TTF2Q9UNY4 1162 aaKnown RBP18.31■□□□□ 0.52
LINC00554-201ENST00000564841 BTBD18B2RXH4 712 aa18.31■□□□□ 0.52
LINC00554-201ENST00000564841 PDE8AO60658 829 aa18.31■□□□□ 0.52
LINC00554-201ENST00000564841 CSF1RP07333 972 aa18.31■□□□□ 0.52
LINC00554-201ENST00000564841 PPARAQ07869 468 aa18.31■□□□□ 0.52
LINC00554-201ENST00000564841 IMMTQ16891 758 aaKnown RBP18.31■□□□□ 0.52
LINC00554-201ENST00000564841 SND1Q7KZF4 910 aaKnown RBP eCLIP18.31■□□□□ 0.52
LINC00554-201ENST00000564841 CNPY4Q8N129 248 aa18.31■□□□□ 0.52
LINC00554-201ENST00000564841 NUP88Q99567 741 aaPredicted RBP18.31■□□□□ 0.52
LINC00554-201ENST00000564841 KCNJ14Q9UNX9 436 aa18.31■□□□□ 0.52
LINC00554-201ENST00000564841 THRAP3Q9Y2W1 955 aaKnown RBP18.31■□□□□ 0.52
LINC00554-201ENST00000564841 FRMD3A2A2Y4 597 aa18.3■□□□□ 0.52
LINC00554-201ENST00000564841 GPAA1O43292 621 aa18.3■□□□□ 0.52
LINC00554-201ENST00000564841 PBX1P40424 430 aa18.3■□□□□ 0.52
LINC00554-201ENST00000564841 FNTAP49354 379 aa18.3■□□□□ 0.52
LINC00554-201ENST00000564841 DPYDQ12882 1025 aa18.3■□□□□ 0.52
LINC00554-201ENST00000564841 DHX37Q8IY37 1157 aaKnown RBP18.3■□□□□ 0.52
LINC00554-201ENST00000564841 CCDC196A0A1B0GTZ2 297 aa18.3■□□□□ 0.52
LINC00554-201ENST00000564841 SHTN1A0MZ66 631 aa18.3■□□□□ 0.52
LINC00554-201ENST00000564841 CCDC189A1A4V9 331 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms