RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 WASF1Q92558 559 aa25.49■■□□□ 1.67
LINC01960-201ENST00000563759 AKAP17AQ02040 695 aaKnown RBP25.49■■□□□ 1.67
LINC01960-201ENST00000563759 NBR1Q14596 966 aa25.49■■□□□ 1.67
LINC01960-201ENST00000563759 ALG1Q9BT22 464 aa25.49■■□□□ 1.67
LINC01960-201ENST00000563759 RNF26Q9BY78 433 aaPredicted RBP25.49■■□□□ 1.67
LINC01960-201ENST00000563759 ATP6V1DQ9Y5K8 247 aa25.49■■□□□ 1.67
LINC01960-201ENST00000563759 BAG4O95429 457 aaKnown RBP25.48■■□□□ 1.67
LINC01960-201ENST00000563759 L3MBTL3Q96JM7 780 aaPredicted RBP25.48■■□□□ 1.67
LINC01960-201ENST00000563759 DEXIO95424 95 aa25.47■■□□□ 1.67
LINC01960-201ENST00000563759 GUCY1B3Q02153 619 aa25.47■■□□□ 1.67
LINC01960-201ENST00000563759 RRP1BQ14684 758 aaKnown RBP25.47■■□□□ 1.67
LINC01960-201ENST00000563759 CLEC17AQ6ZS10 378 aa25.47■■□□□ 1.67
LINC01960-201ENST00000563759 FERMT3Q86UX7 667 aa25.47■■□□□ 1.67
LINC01960-201ENST00000563759 MAD2L2Q9UI95 211 aa25.47■■□□□ 1.67
LINC01960-201ENST00000563759 CNTNAP5Q8WYK1 1306 aa25.47■■□□□ 1.67
LINC01960-201ENST00000563759 PARP1P09874 1014 aaKnown RBP25.47■■□□□ 1.67
LINC01960-201ENST00000563759 GNAQP50148 359 aa25.47■■□□□ 1.67
LINC01960-201ENST00000563759 RASGRP2Q7LDG7 609 aa25.47■■□□□ 1.67
LINC01960-201ENST00000563759 AIFM3Q96NN9 605 aa25.47■■□□□ 1.67
LINC01960-201ENST00000563759 PITPNM2Q9BZ72 1349 aa25.46■■□□□ 1.67
LINC01960-201ENST00000563759 DOCK1Q14185 1865 aa25.46■■□□□ 1.67
LINC01960-201ENST00000563759 EEF2P13639 858 aaKnown RBP25.46■■□□□ 1.67
LINC01960-201ENST00000563759 FUT2Q10981 343 aa25.46■■□□□ 1.67
LINC01960-201ENST00000563759 FOXD4L6Q3SYB3 417 aaPredicted RBP25.46■■□□□ 1.67
LINC01960-201ENST00000563759 FOXD4L3Q6VB84 417 aaPredicted RBP25.46■■□□□ 1.67
LINC01960-201ENST00000563759 STAG2Q8N3U4 1231 aa25.46■■□□□ 1.67
LINC01960-201ENST00000563759 SRBD1Q8N5C6 995 aaKnown RBP25.46■■□□□ 1.67
LINC01960-201ENST00000563759 NYAP2Q9P242 653 aa25.46■■□□□ 1.67
LINC01960-201ENST00000563759 GLTPD2A6NH11 291 aa25.45■■□□□ 1.67
LINC01960-201ENST00000563759 GUCY1A2P33402 732 aa25.45■■□□□ 1.67
LINC01960-201ENST00000563759 MCM4P33991 863 aa25.45■■□□□ 1.67
LINC01960-201ENST00000563759 TRIM29Q14134 588 aa25.45■■□□□ 1.67
LINC01960-201ENST00000563759 ZBTB21Q9ULJ3 1066 aa25.45■■□□□ 1.67
LINC01960-201ENST00000563759 PPP2R3BQ9Y5P8 575 aa25.45■■□□□ 1.67
LINC01960-201ENST00000563759 UBE2Q2LH0YL09 131 aa25.45■■□□□ 1.66
LINC01960-201ENST00000563759 GOLGA6L22H0YM25 854 aa25.45■■□□□ 1.66
LINC01960-201ENST00000563759 PDHBP11177 359 aa25.45■■□□□ 1.66
LINC01960-201ENST00000563759 JAG1P78504 1218 aa25.45■■□□□ 1.66
LINC01960-201ENST00000563759 MAP3K10Q02779 954 aa25.45■■□□□ 1.66
LINC01960-201ENST00000563759 MCTP1Q6DN14 999 aa25.45■■□□□ 1.66
LINC01960-201ENST00000563759 HOOK2Q96ED9 719 aa25.45■■□□□ 1.66
LINC01960-201ENST00000563759 PALM3A6NDB9 673 aaPredicted RBP25.44■■□□□ 1.66
LINC01960-201ENST00000563759 GOLGA8HP0CJ92 632 aa25.44■■□□□ 1.66
LINC01960-201ENST00000563759 NBPF12Q5TAG4 269 aaPredicted RBP25.44■■□□□ 1.66
LINC01960-201ENST00000563759 USP17L2Q6R6M4 530 aa25.44■■□□□ 1.66
LINC01960-201ENST00000563759 FBXO18Q8NFZ0 1043 aa25.44■■□□□ 1.66
LINC01960-201ENST00000563759 DDX11L8A8MPP1 907 aa25.43■■□□□ 1.66
LINC01960-201ENST00000563759 USP17L5A8MUK1 530 aa25.43■■□□□ 1.66
LINC01960-201ENST00000563759 PRPF3O43395 683 aaKnown RBP25.43■■□□□ 1.66
LINC01960-201ENST00000563759 CAP2P40123 477 aa25.43■■□□□ 1.66
LINC01960-201ENST00000563759 DCAF15Q66K64 600 aa25.43■■□□□ 1.66
LINC01960-201ENST00000563759 OTUD7BQ6GQQ9 843 aa25.43■■□□□ 1.66
LINC01960-201ENST00000563759 KLRF2D3W0D1 207 aa25.43■■□□□ 1.66
LINC01960-201ENST00000563759 RAD21O60216 631 aa25.43■■□□□ 1.66
LINC01960-201ENST00000563759 ASPRV1Q53RT3 343 aa25.43■■□□□ 1.66
LINC01960-201ENST00000563759 LZTS2Q9BRK4 669 aa25.43■■□□□ 1.66
LINC01960-201ENST00000563759 GJB4Q9NTQ9 266 aa25.43■■□□□ 1.66
LINC01960-201ENST00000563759 V9GY48 417 aaPredicted RBP25.43■■□□□ 1.66
LINC01960-201ENST00000563759 WDR90Q96KV7 1748 aa25.42■■□□□ 1.66
LINC01960-201ENST00000563759 hCG_1642624A0A1W2PR95 340 aa25.42■■□□□ 1.66
LINC01960-201ENST00000563759 EPHX2P34913 555 aa25.42■■□□□ 1.66
LINC01960-201ENST00000563759 MKL1Q969V6 931 aa25.42■■□□□ 1.66
LINC01960-201ENST00000563759 DCPSQ96C86 337 aaKnown RBP25.42■■□□□ 1.66
LINC01960-201ENST00000563759 CHAMP1Q96JM3 812 aa25.42■■□□□ 1.66
LINC01960-201ENST00000563759 ARHGEF10LQ9HCE6 1279 aa25.42■■□□□ 1.66
LINC01960-201ENST00000563759 RBM27Q9P2N5 1060 aaKnown RBP25.42■■□□□ 1.66
LINC01960-201ENST00000563759 FRMPD2Q68DX3 1309 aaPredicted RBP25.41■■□□□ 1.66
LINC01960-201ENST00000563759 PRAMEF18Q5VWM3 479 aa25.41■■□□□ 1.66
LINC01960-201ENST00000563759 RGS22Q8NE09 1264 aa25.41■■□□□ 1.66
LINC01960-201ENST00000563759 ZSCAN16Q9H4T2 348 aaPredicted RBP25.41■■□□□ 1.66
LINC01960-201ENST00000563759 ASNSP08243 561 aa25.4■■□□□ 1.66
LINC01960-201ENST00000563759 SNHG28P0DPA3 235 aa25.4■■□□□ 1.66
LINC01960-201ENST00000563759 CCDC96Q2M329 555 aa25.4■■□□□ 1.66
LINC01960-201ENST00000563759 KRT40Q6A162 431 aa25.4■■□□□ 1.66
LINC01960-201ENST00000563759 USP50Q70EL3 339 aaPredicted RBP25.4■■□□□ 1.66
LINC01960-201ENST00000563759 PIBF1Q8WXW3 757 aa25.4■■□□□ 1.66
LINC01960-201ENST00000563759 ISY1Q9ULR0 285 aaKnown RBP25.4■■□□□ 1.66
LINC01960-201ENST00000563759 IQCA1LA6NCM1 817 aa25.4■■□□□ 1.66
LINC01960-201ENST00000563759 XBP1P17861 261 aa25.4■■□□□ 1.66
LINC01960-201ENST00000563759 RESTQ13127 1097 aa25.4■■□□□ 1.66
LINC01960-201ENST00000563759 SIAH1Q8IUQ4 282 aa25.4■■□□□ 1.66
LINC01960-201ENST00000563759 SULF1Q8IWU6 871 aa25.4■■□□□ 1.66
LINC01960-201ENST00000563759 PHF20L1A8MW92 1017 aa25.39■■□□□ 1.66
LINC01960-201ENST00000563759 NCLP19338 710 aaKnown RBP25.39■■□□□ 1.66
LINC01960-201ENST00000563759 SPZ1Q9BXG8 430 aa25.39■■□□□ 1.66
LINC01960-201ENST00000563759 ZNF341Q9BYN7 854 aa25.39■■□□□ 1.66
LINC01960-201ENST00000563759 PKN1Q16512 942 aa25.38■■□□□ 1.65
LINC01960-201ENST00000563759 ZNF543Q08ER8 600 aa25.38■■□□□ 1.65
LINC01960-201ENST00000563759 GPATCH4Q5T3I0 446 aaKnown RBP25.38■■□□□ 1.65
LINC01960-201ENST00000563759 GMCL1P1Q8NEA9 526 aa25.38■■□□□ 1.65
LINC01960-201ENST00000563759 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.38■■□□□ 1.65
LINC01960-201ENST00000563759 SYNPO2Q9UMS6 1093 aa25.38■■□□□ 1.65
LINC01960-201ENST00000563759 SSC5DA1L4H1 1573 aa25.37■■□□□ 1.65
LINC01960-201ENST00000563759 SCG2P13521 617 aa25.37■■□□□ 1.65
LINC01960-201ENST00000563759 SLC1A4P43007 532 aa25.37■■□□□ 1.65
LINC01960-201ENST00000563759 GNL2Q13823 731 aaKnown RBP25.37■■□□□ 1.65
LINC01960-201ENST00000563759 SUPT20HL1Q3ZLR7 823 aa25.37■■□□□ 1.65
LINC01960-201ENST00000563759 SLFN13Q68D06 897 aa25.37■■□□□ 1.65
LINC01960-201ENST00000563759 DCAF4Q8WV16 495 aa25.37■■□□□ 1.65
LINC01960-201ENST00000563759 CPVLQ9H3G5 476 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms