RNA–Protein interactions for RNA: ENST00000563494.5

GGA2-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-205ENST00000563494 SBK1Q52WX2 424 aa25.28■■□□□ 1.64
GGA2-205ENST00000563494 PI4K2BQ8TCG2 481 aa25.28■■□□□ 1.64
GGA2-205ENST00000563494 SALL3Q9BXA9 1300 aa25.28■■□□□ 1.64
GGA2-205ENST00000563494 SZT2Q5T011 3432 aa25.27■■□□□ 1.64
GGA2-205ENST00000563494 PTPREP23469 700 aa25.27■■□□□ 1.64
GGA2-205ENST00000563494 RRP1P56182 461 aaKnown RBP25.27■■□□□ 1.64
GGA2-205ENST00000563494 CACNB2Q08289 660 aaPredicted RBP25.27■■□□□ 1.64
GGA2-205ENST00000563494 ANKLE1Q8NAG6 615 aa25.27■■□□□ 1.64
GGA2-205ENST00000563494 OTUD7AQ8TE49 926 aaPredicted RBP25.27■■□□□ 1.64
GGA2-205ENST00000563494 HTATIP2Q9BUP3 242 aa25.27■■□□□ 1.64
GGA2-205ENST00000563494 HOXC10Q9NYD6 342 aa25.27■■□□□ 1.64
GGA2-205ENST00000563494 OGDHLQ9ULD0 1010 aa25.27■■□□□ 1.64
GGA2-205ENST00000563494 HOXC6P09630 235 aa25.26■■□□□ 1.63
GGA2-205ENST00000563494 RGS2P41220 211 aa25.26■■□□□ 1.63
GGA2-205ENST00000563494 MAP2K5Q13163 448 aa25.26■■□□□ 1.63
GGA2-205ENST00000563494 GIMAP6Q6P9H5 292 aa25.26■■□□□ 1.63
GGA2-205ENST00000563494 TRMT44Q8IYL2 757 aaKnown RBP25.26■■□□□ 1.63
GGA2-205ENST00000563494 DIS3LQ8TF46 1054 aaKnown RBP25.26■■□□□ 1.63
GGA2-205ENST00000563494 APPBP2Q92624 585 aa25.26■■□□□ 1.63
GGA2-205ENST00000563494 LPAR1Q92633 364 aa25.26■■□□□ 1.63
GGA2-205ENST00000563494 DPF3Q92784 378 aa25.26■■□□□ 1.63
GGA2-205ENST00000563494 PAWRQ96IZ0 340 aaKnown RBP25.26■■□□□ 1.63
GGA2-205ENST00000563494 VCPKMTQ9H867 229 aa25.26■■□□□ 1.63
GGA2-205ENST00000563494 FLRT1Q9NZU1 646 aa25.26■■□□□ 1.63
GGA2-205ENST00000563494 RNF113AO15541 343 aaKnown RBP25.25■■□□□ 1.63
GGA2-205ENST00000563494 PRKAR2AP13861 404 aaKnown RBP25.25■■□□□ 1.63
GGA2-205ENST00000563494 CCNA1P78396 465 aa25.25■■□□□ 1.63
GGA2-205ENST00000563494 GRB14Q14449 540 aa25.25■■□□□ 1.63
GGA2-205ENST00000563494 LHX8Q68G74 356 aa25.25■■□□□ 1.63
GGA2-205ENST00000563494 APBA2Q99767 749 aa25.25■■□□□ 1.63
GGA2-205ENST00000563494 ADAMTS5Q9UNA0 930 aa25.25■■□□□ 1.63
GGA2-205ENST00000563494 TTC41PQ6P2S7 1318 aa25.25■■□□□ 1.63
GGA2-205ENST00000563494 ROBO3Q96MS0 1386 aa25.24■■□□□ 1.63
GGA2-205ENST00000563494 SLC15A5A6NIM6 579 aa25.24■■□□□ 1.63
GGA2-205ENST00000563494 DSG3P32926 999 aa25.24■■□□□ 1.63
GGA2-205ENST00000563494 FXR1P51114 621 aaKnown RBP eCLIP25.24■■□□□ 1.63
GGA2-205ENST00000563494 ICA1Q05084 483 aa25.24■■□□□ 1.63
GGA2-205ENST00000563494 MOV10L1Q9BXT6 1211 aaKnown RBP25.24■■□□□ 1.63
GGA2-205ENST00000563494 EPB41L4AQ9HCS5 686 aaPredicted RBP25.24■■□□□ 1.63
GGA2-205ENST00000563494 ARPP21Q9UBL0 812 aaPredicted RBP25.24■■□□□ 1.63
GGA2-205ENST00000563494 ZNF236Q9UL36 1845 aa25.23■■□□□ 1.63
GGA2-205ENST00000563494 EEF2P13639 858 aaKnown RBP25.23■■□□□ 1.63
GGA2-205ENST00000563494 KANSL2Q9H9L4 492 aa25.23■■□□□ 1.63
GGA2-205ENST00000563494 DNAH12Q6ZR08 3092 aa25.23■■□□□ 1.63
GGA2-205ENST00000563494 ZFYP08048 801 aaPredicted RBP25.22■■□□□ 1.63
GGA2-205ENST00000563494 ZKSCAN1P17029 563 aaPredicted RBP25.22■■□□□ 1.63
GGA2-205ENST00000563494 RASA1P20936 1047 aa25.22■■□□□ 1.63
GGA2-205ENST00000563494 CCND3P30281 292 aaPredicted RBP25.22■■□□□ 1.63
GGA2-205ENST00000563494 NPLOC4Q8TAT6 608 aa25.22■■□□□ 1.63
GGA2-205ENST00000563494 ARHGEF10LQ9HCE6 1279 aa25.22■■□□□ 1.63
GGA2-205ENST00000563494 M0R2C6 588 aa25.21■■□□□ 1.63
GGA2-205ENST00000563494 GPAA1O43292 621 aa25.21■■□□□ 1.63
GGA2-205ENST00000563494 NECAB2Q7Z6G3 386 aa25.21■■□□□ 1.63
GGA2-205ENST00000563494 SPICE1Q8N0Z3 855 aa25.21■■□□□ 1.63
GGA2-205ENST00000563494 SHCBP1Q8NEM2 672 aa25.21■■□□□ 1.63
GGA2-205ENST00000563494 GPATCH3Q96I76 525 aa25.21■■□□□ 1.63
GGA2-205ENST00000563494 SPATC1LQ9H0A9 340 aa25.21■■□□□ 1.63
GGA2-205ENST00000563494 LAMA3Q16787 3333 aa25.21■■□□□ 1.63
GGA2-205ENST00000563494 WDR46O15213 610 aaKnown RBP25.2■■□□□ 1.62
GGA2-205ENST00000563494 CCAR1Q8IX12 1150 aaKnown RBP25.2■■□□□ 1.62
GGA2-205ENST00000563494 AMOTL1Q8IY63 956 aa25.2■■□□□ 1.62
GGA2-205ENST00000563494 DDRGK1Q96HY6 314 aa25.2■■□□□ 1.62
GGA2-205ENST00000563494 FRMPD3Q5JV73 1810 aa25.19■■□□□ 1.62
GGA2-205ENST00000563494 IGKV6D-41A0A0C4DH26 115 aa25.19■■□□□ 1.62
GGA2-205ENST00000563494 GLRX3O76003 335 aaKnown RBP25.19■■□□□ 1.62
GGA2-205ENST00000563494 COL6A1P12109 1028 aa25.19■■□□□ 1.62
GGA2-205ENST00000563494 MB21D1Q8N884 522 aa25.19■■□□□ 1.62
GGA2-205ENST00000563494 ATG4CQ96DT6 458 aa25.19■■□□□ 1.62
GGA2-205ENST00000563494 CRBNQ96SW2 442 aa25.19■■□□□ 1.62
GGA2-205ENST00000563494 SEC62Q99442 399 aaKnown RBP25.19■■□□□ 1.62
GGA2-205ENST00000563494 TANGO6Q9C0B7 1094 aa25.19■■□□□ 1.62
GGA2-205ENST00000563494 SH2D4AQ9H788 454 aa25.19■■□□□ 1.62
GGA2-205ENST00000563494 PCDH10Q9P2E7 1040 aa25.19■■□□□ 1.62
GGA2-205ENST00000563494 COL11A1P12107 1806 aaPredicted RBP25.19■■□□□ 1.62
GGA2-205ENST00000563494 TRIOBPQ9H2D6 2365 aa25.18■■□□□ 1.62
GGA2-205ENST00000563494 STRNO43815 780 aa25.18■■□□□ 1.62
GGA2-205ENST00000563494 CHRDL2Q6WN34 429 aa25.18■■□□□ 1.62
GGA2-205ENST00000563494 RBM27Q9P2N5 1060 aaKnown RBP25.18■■□□□ 1.62
GGA2-205ENST00000563494 NR2E3Q9Y5X4 410 aa25.18■■□□□ 1.62
GGA2-205ENST00000563494 PFASO15067 1338 aa25.17■■□□□ 1.62
GGA2-205ENST00000563494 PATL2C9JE40 543 aaKnown RBP25.17■■□□□ 1.62
GGA2-205ENST00000563494 FOXP2O15409 715 aa25.17■■□□□ 1.62
GGA2-205ENST00000563494 ERCC3P19447 782 aa25.17■■□□□ 1.62
GGA2-205ENST00000563494 TMEM132BQ14DG7 1078 aa25.17■■□□□ 1.62
GGA2-205ENST00000563494 ZMYM1Q5SVZ6 1142 aa25.17■■□□□ 1.62
GGA2-205ENST00000563494 NBPF3Q9H094 633 aa25.17■■□□□ 1.62
GGA2-205ENST00000563494 COBLO75128 1261 aa25.16■■□□□ 1.62
GGA2-205ENST00000563494 FLOT1O75955 427 aa25.16■■□□□ 1.62
GGA2-205ENST00000563494 GNAT2P19087 354 aa25.16■■□□□ 1.62
GGA2-205ENST00000563494 HDAC1Q13547 482 aaPredicted RBP25.16■■□□□ 1.62
GGA2-205ENST00000563494 IFNL3Q8IZI9 196 aa25.16■■□□□ 1.62
GGA2-205ENST00000563494 TRPV1Q8NER1 839 aa25.16■■□□□ 1.62
GGA2-205ENST00000563494 REPS2Q8NFH8 660 aa25.16■■□□□ 1.62
GGA2-205ENST00000563494 FBXO28Q9NVF7 368 aa25.16■■□□□ 1.62
GGA2-205ENST00000563494 NYAP2Q9P242 653 aa25.16■■□□□ 1.62
GGA2-205ENST00000563494 ZNFX1Q9P2E3 1918 aaKnown RBP25.16■■□□□ 1.62
GGA2-205ENST00000563494 ERC2O15083 957 aa25.15■■□□□ 1.62
GGA2-205ENST00000563494 EVI5O60447 810 aa25.15■■□□□ 1.62
GGA2-205ENST00000563494 MX1P20591 662 aa25.15■■□□□ 1.62
GGA2-205ENST00000563494 ADORA2AP29274 412 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms