RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 EN1Q05925 392 aaPredicted RBP21.96■■□□□ 1.11
SMPD3-203ENST00000563226 DHX40Q8IX18 779 aaKnown RBP21.96■■□□□ 1.11
SMPD3-203ENST00000563226 TIGD1Q96MW7 591 aa21.96■■□□□ 1.11
SMPD3-203ENST00000563226 BIN1O00499 593 aa21.95■■□□□ 1.11
SMPD3-203ENST00000563226 DPCR1Q3MIW9 517 aa21.95■■□□□ 1.11
SMPD3-203ENST00000563226 CCDC178Q5BJE1 867 aa21.95■■□□□ 1.11
SMPD3-203ENST00000563226 NEDD1Q8NHV4 660 aa21.95■■□□□ 1.11
SMPD3-203ENST00000563226 ZNF646O15015 1829 aaPredicted RBP21.95■■□□□ 1.1
SMPD3-203ENST00000563226 SLC15A2Q16348 729 aa21.95■■□□□ 1.1
SMPD3-203ENST00000563226 SPC24Q8NBT2 197 aa21.95■■□□□ 1.1
SMPD3-203ENST00000563226 GPKOWQ92917 476 aaPredicted RBP eCLIP21.95■■□□□ 1.1
SMPD3-203ENST00000563226 TMX4Q9H1E5 349 aaPredicted RBP21.95■■□□□ 1.1
SMPD3-203ENST00000563226 ZNF287Q9HBT7 754 aa21.95■■□□□ 1.1
SMPD3-203ENST00000563226 KCNH3Q9ULD8 1083 aa21.95■■□□□ 1.1
SMPD3-203ENST00000563226 MYH8P13535 1937 aa21.95■■□□□ 1.1
SMPD3-203ENST00000563226 G3V3G9 751 aa21.94■■□□□ 1.1
SMPD3-203ENST00000563226 H0YIN7 160 aa21.94■■□□□ 1.1
SMPD3-203ENST00000563226 LONRF3Q496Y0 759 aa21.94■■□□□ 1.1
SMPD3-203ENST00000563226 DCAF8Q5TAQ9 597 aa21.94■■□□□ 1.1
SMPD3-203ENST00000563226 TRIM75PA6NK02 468 aa21.94■■□□□ 1.1
SMPD3-203ENST00000563226 CYTH3O43739 400 aa21.94■■□□□ 1.1
SMPD3-203ENST00000563226 NLRP5P59047 1200 aa21.94■■□□□ 1.1
SMPD3-203ENST00000563226 CAMKK2Q96RR4 588 aa21.94■■□□□ 1.1
SMPD3-203ENST00000563226 TTC12Q9H892 705 aaPredicted RBP21.94■■□□□ 1.1
SMPD3-203ENST00000563226 BRMS1Q9HCU9 246 aa21.94■■□□□ 1.1
SMPD3-203ENST00000563226 GOLGA8HP0CJ92 632 aa21.93■■□□□ 1.1
SMPD3-203ENST00000563226 ZNF75DP51815 510 aa21.93■■□□□ 1.1
SMPD3-203ENST00000563226 STYK1Q6J9G0 422 aa21.93■■□□□ 1.1
SMPD3-203ENST00000563226 PLA2G4DQ86XP0 818 aa21.93■■□□□ 1.1
SMPD3-203ENST00000563226 CEP57L1Q8IYX8 460 aa21.93■■□□□ 1.1
SMPD3-203ENST00000563226 CEP95Q96GE4 821 aa21.93■■□□□ 1.1
SMPD3-203ENST00000563226 SRPRBQ9Y5M8 271 aaKnown RBP21.93■■□□□ 1.1
SMPD3-203ENST00000563226 PALM3A6NDB9 673 aaPredicted RBP21.92■■□□□ 1.1
SMPD3-203ENST00000563226 PNOCQ13519 176 aa21.92■■□□□ 1.1
SMPD3-203ENST00000563226 TYW1BQ6NUM6 668 aa21.92■■□□□ 1.1
SMPD3-203ENST00000563226 METTL16Q86W50 562 aaKnown RBP21.92■■□□□ 1.1
SMPD3-203ENST00000563226 AOPEPQ8N6M6 819 aa21.92■■□□□ 1.1
SMPD3-203ENST00000563226 CPVLQ9H3G5 476 aa21.92■■□□□ 1.1
SMPD3-203ENST00000563226 USP40Q9NVE5 1235 aa21.92■■□□□ 1.1
SMPD3-203ENST00000563226 CEP131Q9UPN4 1083 aa21.92■■□□□ 1.1
SMPD3-203ENST00000563226 GOLGA6L19H0YKK7 550 aa21.92■■□□□ 1.1
SMPD3-203ENST00000563226 ZNF500O60304 480 aaPredicted RBP21.92■■□□□ 1.1
SMPD3-203ENST00000563226 CDC42EP5Q6NZY7 148 aa21.92■■□□□ 1.1
SMPD3-203ENST00000563226 KRBA2Q6ZNG9 492 aa21.92■■□□□ 1.1
SMPD3-203ENST00000563226 USP49Q70CQ1 688 aa21.92■■□□□ 1.1
SMPD3-203ENST00000563226 TRIM5Q9C035 493 aa21.92■■□□□ 1.1
SMPD3-203ENST00000563226 FOXN1O15353 648 aa21.91■■□□□ 1.1
SMPD3-203ENST00000563226 GABPAQ06546 454 aa21.91■■□□□ 1.1
SMPD3-203ENST00000563226 ISM2Q6H9L7 571 aa21.91■■□□□ 1.1
SMPD3-203ENST00000563226 APOBEC3HQ6NTF7 200 aaKnown RBP21.91■■□□□ 1.1
SMPD3-203ENST00000563226 CSRNP2Q9H175 543 aa21.91■■□□□ 1.1
SMPD3-203ENST00000563226 PCDHAC2Q9Y5I4 1007 aa21.91■■□□□ 1.1
SMPD3-203ENST00000563226 NLRP12P59046 1061 aa21.91■■□□□ 1.1
SMPD3-203ENST00000563226 PIK3AP1Q6ZUJ8 805 aa21.91■■□□□ 1.1
SMPD3-203ENST00000563226 TUBE1Q9UJT0 475 aa21.91■■□□□ 1.1
SMPD3-203ENST00000563226 BECN2A8MW95 431 aa21.9■■□□□ 1.1
SMPD3-203ENST00000563226 GNAQP50148 359 aa21.9■■□□□ 1.1
SMPD3-203ENST00000563226 ZNF174Q15697 407 aa21.9■■□□□ 1.1
SMPD3-203ENST00000563226 PODNQ7Z5L7 613 aa21.9■■□□□ 1.1
SMPD3-203ENST00000563226 ZNF579Q8NAF0 562 aaKnown RBP21.9■■□□□ 1.1
SMPD3-203ENST00000563226 CNNM3Q8NE01 707 aa21.9■■□□□ 1.1
SMPD3-203ENST00000563226 TEKT1Q969V4 418 aa21.9■■□□□ 1.1
SMPD3-203ENST00000563226 PDGFDQ9GZP0 370 aaPredicted RBP21.9■■□□□ 1.1
SMPD3-203ENST00000563226 TTC38Q5R3I4 469 aa21.89■■□□□ 1.1
SMPD3-203ENST00000563226 WWC2Q6AWC2 1192 aa21.89■■□□□ 1.1
SMPD3-203ENST00000563226 HHIPL2Q6UWX4 724 aa21.89■■□□□ 1.1
SMPD3-203ENST00000563226 FOXP4Q8IVH2 680 aaPredicted RBP21.89■■□□□ 1.1
SMPD3-203ENST00000563226 STK32BQ9NY57 414 aa21.89■■□□□ 1.1
SMPD3-203ENST00000563226 FAM13BQ9NYF5 915 aa21.89■■□□□ 1.1
SMPD3-203ENST00000563226 POLR2DO15514 142 aaKnown RBP21.89■■□□□ 1.09
SMPD3-203ENST00000563226 ECE2O60344 883 aa21.89■■□□□ 1.09
SMPD3-203ENST00000563226 AKR1B1P15121 316 aa21.89■■□□□ 1.09
SMPD3-203ENST00000563226 CRKP46108 304 aa21.89■■□□□ 1.09
SMPD3-203ENST00000563226 NOVP48745 357 aa21.89■■□□□ 1.09
SMPD3-203ENST00000563226 NFIAQ12857 509 aa21.89■■□□□ 1.09
SMPD3-203ENST00000563226 ZRSR1Q15695 479 aaKnown RBP21.89■■□□□ 1.09
SMPD3-203ENST00000563226 USP17L2Q6R6M4 530 aa21.89■■□□□ 1.09
SMPD3-203ENST00000563226 KLRF2D3W0D1 207 aa21.88■■□□□ 1.09
SMPD3-203ENST00000563226 SLURP2P0DP57 97 aa21.88■■□□□ 1.09
SMPD3-203ENST00000563226 SARM1Q6SZW1 724 aa21.88■■□□□ 1.09
SMPD3-203ENST00000563226 CLEC10AQ8IUN9 316 aa21.88■■□□□ 1.09
SMPD3-203ENST00000563226 KIAA0825Q8IV33 1275 aa21.88■■□□□ 1.09
SMPD3-203ENST00000563226 RASGRP4Q8TDF6 673 aa21.88■■□□□ 1.09
SMPD3-203ENST00000563226 NAT10Q9H0A0 1025 aaKnown RBP21.88■■□□□ 1.09
SMPD3-203ENST00000563226 OSBPL5Q9H0X9 879 aaPredicted RBP21.88■■□□□ 1.09
SMPD3-203ENST00000563226 KCNF1Q9H3M0 494 aa21.88■■□□□ 1.09
SMPD3-203ENST00000563226 MORC2Q9Y6X9 1032 aaPredicted RBP21.88■■□□□ 1.09
SMPD3-203ENST00000563226 PLIN4Q96Q06 1357 aa21.88■■□□□ 1.09
SMPD3-203ENST00000563226 TOP1P11387 765 aaKnown RBP21.87■■□□□ 1.09
SMPD3-203ENST00000563226 C7orf43Q8WVR3 580 aa21.87■■□□□ 1.09
SMPD3-203ENST00000563226 SERTAD1Q9UHV2 236 aa21.87■■□□□ 1.09
SMPD3-203ENST00000563226 MDM2Q00987 491 aaPredicted RBP21.87■■□□□ 1.09
SMPD3-203ENST00000563226 DACT2Q5SW24 774 aa21.87■■□□□ 1.09
SMPD3-203ENST00000563226 HEATR3Q7Z4Q2 680 aa21.87■■□□□ 1.09
SMPD3-203ENST00000563226 ZFPM1Q8IX07 1006 aa21.87■■□□□ 1.09
SMPD3-203ENST00000563226 BLIDQ8IZY5 108 aa21.87■■□□□ 1.09
SMPD3-203ENST00000563226 PDILTQ8N807 584 aa21.87■■□□□ 1.09
SMPD3-203ENST00000563226 SH3GLB2Q9NR46 395 aa21.87■■□□□ 1.09
SMPD3-203ENST00000563226 SIPA1L1O43166 1804 aa21.86■■□□□ 1.09
SMPD3-203ENST00000563226 STXBP3O00186 592 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms