RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 ST14Q9Y5Y6 855 aa4.76□□□□□ -1.65
CHD9-207ENST00000562806 DNAJA2O60884 412 aa4.75□□□□□ -1.65
CHD9-207ENST00000562806 UBOX5O94941 541 aa4.75□□□□□ -1.65
CHD9-207ENST00000562806 ATF4P18848 351 aaPredicted RBP4.75□□□□□ -1.65
CHD9-207ENST00000562806 NASPP49321 788 aaPredicted RBP4.75□□□□□ -1.65
CHD9-207ENST00000562806 ZC3H6P61129 1189 aaKnown RBP4.75□□□□□ -1.65
CHD9-207ENST00000562806 ARID5AQ03989 594 aa4.75□□□□□ -1.65
CHD9-207ENST00000562806 TNK2Q07912 1038 aa4.75□□□□□ -1.65
CHD9-207ENST00000562806 IKZF1Q13422 519 aa4.75□□□□□ -1.65
CHD9-207ENST00000562806 CDKAL1Q5VV42 579 aa4.75□□□□□ -1.65
CHD9-207ENST00000562806 SLC23A3Q6PIS1 610 aa4.75□□□□□ -1.65
CHD9-207ENST00000562806 DTWD2Q8NBA8 298 aa4.75□□□□□ -1.65
CHD9-207ENST00000562806 HSPA12BQ96MM6 686 aa4.75□□□□□ -1.65
CHD9-207ENST00000562806 PAK6Q9NQU5 681 aaPredicted RBP4.75□□□□□ -1.65
CHD9-207ENST00000562806 PPT2Q9UMR5 302 aa4.75□□□□□ -1.65
CHD9-207ENST00000562806 PRR33A8MZF0 331 aa4.74□□□□□ -1.65
CHD9-207ENST00000562806 BIN1O00499 593 aa4.74□□□□□ -1.65
CHD9-207ENST00000562806 SSBP05455 408 aaKnown RBP eCLIP4.74□□□□□ -1.65
CHD9-207ENST00000562806 ENDOUP21128 410 aaKnown RBP4.74□□□□□ -1.65
CHD9-207ENST00000562806 FUT4P22083 530 aa4.74□□□□□ -1.65
CHD9-207ENST00000562806 RBM10P98175 930 aaKnown RBP4.74□□□□□ -1.65
CHD9-207ENST00000562806 PLCL1Q15111 1095 aa4.74□□□□□ -1.65
CHD9-207ENST00000562806 CLEC16AQ2KHT3 1053 aa4.74□□□□□ -1.65
CHD9-207ENST00000562806 TNNI3KQ59H18 835 aa4.74□□□□□ -1.65
CHD9-207ENST00000562806 NBPF12Q5TAG4 269 aaPredicted RBP4.74□□□□□ -1.65
CHD9-207ENST00000562806 PI4K2BQ8TCG2 481 aa4.74□□□□□ -1.65
CHD9-207ENST00000562806 VWCEQ96DN2 955 aa4.74□□□□□ -1.65
CHD9-207ENST00000562806 Q96M66 194 aa4.74□□□□□ -1.65
CHD9-207ENST00000562806 PHAXQ9H814 394 aaKnown RBP4.74□□□□□ -1.65
CHD9-207ENST00000562806 SEMA3GQ9NS98 782 aa4.74□□□□□ -1.65
CHD9-207ENST00000562806 SUCOQ9UBS9 1254 aaKnown RBP4.74□□□□□ -1.65
CHD9-207ENST00000562806 H3BS24 57 aa4.73□□□□□ -1.65
CHD9-207ENST00000562806 CD8BP10966 210 aa4.73□□□□□ -1.65
CHD9-207ENST00000562806 SRFP11831 508 aa4.73□□□□□ -1.65
CHD9-207ENST00000562806 IRAK1P51617 712 aa4.73□□□□□ -1.65
CHD9-207ENST00000562806 PMS1P54277 932 aaKnown RBP4.73□□□□□ -1.65
CHD9-207ENST00000562806 CASP7P55210 303 aa4.73□□□□□ -1.65
CHD9-207ENST00000562806 ZP2Q05996 745 aa4.73□□□□□ -1.65
CHD9-207ENST00000562806 BNIP3Q12983 259 aa4.73□□□□□ -1.65
CHD9-207ENST00000562806 NBPF9Q3BBW0 867 aa4.73□□□□□ -1.65
CHD9-207ENST00000562806 ANKRD39Q53RE8 183 aa4.73□□□□□ -1.65
CHD9-207ENST00000562806 TSPYL5Q86VY4 417 aaPredicted RBP4.73□□□□□ -1.65
CHD9-207ENST00000562806 LSRQ86X29 649 aaPredicted RBP4.73□□□□□ -1.65
CHD9-207ENST00000562806 SYTL5Q8TDW5 730 aaPredicted RBP4.73□□□□□ -1.65
CHD9-207ENST00000562806 UBE2FQ969M7 185 aa4.73□□□□□ -1.65
CHD9-207ENST00000562806 SLC6A18Q96N87 628 aa4.73□□□□□ -1.65
CHD9-207ENST00000562806 C8orf37Q96NL8 207 aa4.73□□□□□ -1.65
CHD9-207ENST00000562806 SLC9A7Q96T83 725 aa4.73□□□□□ -1.65
CHD9-207ENST00000562806 GMLQ99445 158 aa4.73□□□□□ -1.65
CHD9-207ENST00000562806 MKRN2Q9H000 416 aaKnown RBP4.73□□□□□ -1.65
CHD9-207ENST00000562806 ZSWIM5Q9P217 1185 aa4.73□□□□□ -1.65
CHD9-207ENST00000562806 PCDHB12Q9Y5F1 795 aa4.73□□□□□ -1.65
CHD9-207ENST00000562806 COL17A1Q9UMD9 1497 aaPredicted RBP4.73□□□□□ -1.65
CHD9-207ENST00000562806 CNTNAP4Q9C0A0 1308 aa4.72□□□□□ -1.65
CHD9-207ENST00000562806 NAT2P11245 290 aa4.72□□□□□ -1.65
CHD9-207ENST00000562806 TPP2P29144 1249 aaPredicted RBP4.72□□□□□ -1.65
CHD9-207ENST00000562806 NMIQ13287 307 aaPredicted RBP4.72□□□□□ -1.65
CHD9-207ENST00000562806 TCEAL1Q15170 157 aa4.72□□□□□ -1.65
CHD9-207ENST00000562806 UNC5AQ6ZN44 842 aa4.72□□□□□ -1.65
CHD9-207ENST00000562806 SPRED2Q7Z698 418 aa4.72□□□□□ -1.65
CHD9-207ENST00000562806 ZNF655Q8N720 491 aaPredicted RBP4.72□□□□□ -1.65
CHD9-207ENST00000562806 DAGLBQ8NCG7 672 aa4.72□□□□□ -1.65
CHD9-207ENST00000562806 DHX38Q92620 1227 aaKnown RBP4.72□□□□□ -1.65
CHD9-207ENST00000562806 SHDQ96IW2 340 aa4.72□□□□□ -1.65
CHD9-207ENST00000562806 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.72□□□□□ -1.65
CHD9-207ENST00000562806 TINF2Q9BSI4 451 aa4.72□□□□□ -1.65
CHD9-207ENST00000562806 DUSP15Q9H1R2 295 aaPredicted RBP4.72□□□□□ -1.65
CHD9-207ENST00000562806 ANTXR1Q9H6X2 564 aa4.72□□□□□ -1.65
CHD9-207ENST00000562806 U3KQE9 123 aa4.72□□□□□ -1.65
CHD9-207ENST00000562806 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
CHD9-207ENST00000562806 POLR2BP30876 1174 aaKnown RBP4.71□□□□□ -1.66
CHD9-207ENST00000562806 CCDC81Q6ZN84 652 aa4.71□□□□□ -1.66
CHD9-207ENST00000562806 RNF111Q6ZNA4 994 aa4.71□□□□□ -1.66
CHD9-207ENST00000562806 CCDC144CPQ8IYA2 1237 aa4.71□□□□□ -1.66
CHD9-207ENST00000562806 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
CHD9-207ENST00000562806 ATP13A1Q9HD20 1204 aa4.71□□□□□ -1.66
CHD9-207ENST00000562806 DUSP13Q9UII6 198 aa4.71□□□□□ -1.66
CHD9-207ENST00000562806 FBXL21Q9UKT6 434 aa4.71□□□□□ -1.66
CHD9-207ENST00000562806 ZNF214Q9UL59 606 aaPredicted RBP4.71□□□□□ -1.66
CHD9-207ENST00000562806 OAS3Q9Y6K5 1087 aaKnown RBP4.71□□□□□ -1.66
CHD9-207ENST00000562806 A0A087WZG4 1122 aa4.7□□□□□ -1.66
CHD9-207ENST00000562806 SSU72P8A0A1W2PR75 194 aa4.7□□□□□ -1.66
CHD9-207ENST00000562806 SIGLEC6O43699 453 aa4.7□□□□□ -1.66
CHD9-207ENST00000562806 ADAMTS4O75173 837 aa4.7□□□□□ -1.66
CHD9-207ENST00000562806 ACRP10323 421 aa4.7□□□□□ -1.66
CHD9-207ENST00000562806 JUNBP17275 347 aaPredicted RBP4.7□□□□□ -1.66
CHD9-207ENST00000562806 LTKP29376 864 aa4.7□□□□□ -1.66
CHD9-207ENST00000562806 ZNF143P52747 638 aaPredicted RBP4.7□□□□□ -1.66
CHD9-207ENST00000562806 AUHQ13825 339 aaKnown RBP4.7□□□□□ -1.66
CHD9-207ENST00000562806 NCAPHQ15003 741 aa4.7□□□□□ -1.66
CHD9-207ENST00000562806 GAB4Q2WGN9 574 aa4.7□□□□□ -1.66
CHD9-207ENST00000562806 ZNF792Q3KQV3 632 aa4.7□□□□□ -1.66
CHD9-207ENST00000562806 NFXL1Q6ZNB6 911 aa4.7□□□□□ -1.66
CHD9-207ENST00000562806 ATG4DQ86TL0 474 aaPredicted RBP4.7□□□□□ -1.66
CHD9-207ENST00000562806 TTC6Q86TZ1 520 aa4.7□□□□□ -1.66
CHD9-207ENST00000562806 CREG2Q8IUH2 290 aa4.7□□□□□ -1.66
CHD9-207ENST00000562806 TMEM192Q8IY95 271 aa4.7□□□□□ -1.66
CHD9-207ENST00000562806 C7orf61Q8IZ16 206 aa4.7□□□□□ -1.66
CHD9-207ENST00000562806 ABI1Q8IZP0 508 aa4.7□□□□□ -1.66
CHD9-207ENST00000562806 ALPK1Q96QP1 1244 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms