RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 A0A0D9SFI3 127 aa19.76■□□□□ 0.75
CDT1-202ENST00000562747 USP17L10C9JJH3 530 aa19.76■□□□□ 0.75
CDT1-202ENST00000562747 HIP1O00291 1037 aa19.76■□□□□ 0.75
CDT1-202ENST00000562747 MNX1P50219 401 aaPredicted RBP19.76■□□□□ 0.75
CDT1-202ENST00000562747 NMIQ13287 307 aaPredicted RBP19.76■□□□□ 0.75
CDT1-202ENST00000562747 MTMR2Q13614 643 aa19.76■□□□□ 0.75
CDT1-202ENST00000562747 MINDY4BA8MYZ0 360 aa19.75■□□□□ 0.75
CDT1-202ENST00000562747 SMIM22K7EJ46 135 aa19.75■□□□□ 0.75
CDT1-202ENST00000562747 MPHOSPH10O00566 681 aaKnown RBP19.75■□□□□ 0.75
CDT1-202ENST00000562747 RAB3GAP1Q15042 981 aa19.75■□□□□ 0.75
CDT1-202ENST00000562747 TMEM179Q6ZVK1 233 aa19.75■□□□□ 0.75
CDT1-202ENST00000562747 TRIB2Q92519 343 aa19.75■□□□□ 0.75
CDT1-202ENST00000562747 LRCH3Q96II8 777 aa19.75■□□□□ 0.75
CDT1-202ENST00000562747 NAPBQ9H115 298 aa19.75■□□□□ 0.75
CDT1-202ENST00000562747 TMOD4Q9NZQ9 345 aa19.75■□□□□ 0.75
CDT1-202ENST00000562747 MORF4L1Q9UBU8 362 aa19.75■□□□□ 0.75
CDT1-202ENST00000562747 GSPT1P15170 499 aaKnown RBP19.74■□□□□ 0.75
CDT1-202ENST00000562747 GUCY1A2P33402 732 aa19.74■□□□□ 0.75
CDT1-202ENST00000562747 MFAP1P55081 439 aaKnown RBP19.74■□□□□ 0.75
CDT1-202ENST00000562747 PABPC4Q13310 644 aaKnown RBP eCLIP19.74■□□□□ 0.75
CDT1-202ENST00000562747 TXNRD2Q9NNW7 524 aa19.74■□□□□ 0.75
CDT1-202ENST00000562747 A0A1W2PPC1 479 aa19.73■□□□□ 0.75
CDT1-202ENST00000562747 FOXP2O15409 715 aa19.73■□□□□ 0.75
CDT1-202ENST00000562747 CAPN2P17655 700 aa19.73■□□□□ 0.75
CDT1-202ENST00000562747 SEPT2Q15019 361 aa19.73■□□□□ 0.75
CDT1-202ENST00000562747 NECAB2Q7Z6G3 386 aa19.73■□□□□ 0.75
CDT1-202ENST00000562747 C7orf61Q8IZ16 206 aa19.73■□□□□ 0.75
CDT1-202ENST00000562747 ZNF287Q9HBT7 754 aa19.73■□□□□ 0.75
CDT1-202ENST00000562747 DIAPH3Q9NSV4 1193 aa19.73■□□□□ 0.75
CDT1-202ENST00000562747 CCDC171Q6TFL3 1326 aa19.73■□□□□ 0.75
CDT1-202ENST00000562747 RPTORQ8N122 1335 aa19.73■□□□□ 0.75
CDT1-202ENST00000562747 AKR1B1P15121 316 aa19.72■□□□□ 0.75
CDT1-202ENST00000562747 USP14P54578 494 aa19.72■□□□□ 0.75
CDT1-202ENST00000562747 ALX1Q15699 326 aa19.72■□□□□ 0.75
CDT1-202ENST00000562747 VPS53Q5VIR6 699 aa19.72■□□□□ 0.75
CDT1-202ENST00000562747 USP17L2Q6R6M4 530 aa19.72■□□□□ 0.75
CDT1-202ENST00000562747 POTEEQ6S8J3 1075 aa19.72■□□□□ 0.75
CDT1-202ENST00000562747 ZNF589Q86UQ0 364 aaPredicted RBP19.72■□□□□ 0.75
CDT1-202ENST00000562747 P2RX7Q99572 595 aaKnown RBP19.72■□□□□ 0.75
CDT1-202ENST00000562747 FEZ1Q99689 392 aa19.72■□□□□ 0.75
CDT1-202ENST00000562747 KIAA1683Q9H0B3 1180 aa19.72■□□□□ 0.75
CDT1-202ENST00000562747 ZMYND8Q9ULU4 1186 aaPredicted RBP19.72■□□□□ 0.75
CDT1-202ENST00000562747 FRMPD3Q5JV73 1810 aa19.72■□□□□ 0.75
CDT1-202ENST00000562747 SLC3A2P08195 630 aaKnown RBP19.71■□□□□ 0.75
CDT1-202ENST00000562747 IRX3P78415 501 aaPredicted RBP19.71■□□□□ 0.75
CDT1-202ENST00000562747 PPARAQ07869 468 aa19.71■□□□□ 0.75
CDT1-202ENST00000562747 ANKLE1Q8NAG6 615 aa19.71■□□□□ 0.75
CDT1-202ENST00000562747 CCDC136Q96JN2 1154 aa19.71■□□□□ 0.75
CDT1-202ENST00000562747 C12orf42Q96LP6 360 aa19.71■□□□□ 0.75
CDT1-202ENST00000562747 GDF15Q99988 308 aa19.71■□□□□ 0.75
CDT1-202ENST00000562747 MKNK2Q9HBH9 465 aa19.71■□□□□ 0.75
CDT1-202ENST00000562747 HMX1Q9NP08 348 aaPredicted RBP19.71■□□□□ 0.75
CDT1-202ENST00000562747 ZMYM6O95789 1325 aa19.71■□□□□ 0.75
CDT1-202ENST00000562747 HSPD1P10809 573 aaKnown RBP19.7■□□□□ 0.74
CDT1-202ENST00000562747 CYP2B6P20813 491 aa19.7■□□□□ 0.74
CDT1-202ENST00000562747 RASA1P20936 1047 aa19.7■□□□□ 0.74
CDT1-202ENST00000562747 HOXA7P31268 230 aaPredicted RBP19.7■□□□□ 0.74
CDT1-202ENST00000562747 HERVK_113P62684 666 aa19.7■□□□□ 0.74
CDT1-202ENST00000562747 MAP3K21Q5TCX8 1036 aa19.7■□□□□ 0.74
CDT1-202ENST00000562747 CWC27Q6UX04 472 aaKnown RBP19.7■□□□□ 0.74
CDT1-202ENST00000562747 ACER1Q8TDN7 264 aa19.7■□□□□ 0.74
CDT1-202ENST00000562747 EMILIN3Q9NT22 766 aa19.7■□□□□ 0.74
CDT1-202ENST00000562747 SYN1P17600 705 aa19.69■□□□□ 0.74
CDT1-202ENST00000562747 ICA1Q05084 483 aa19.69■□□□□ 0.74
CDT1-202ENST00000562747 PDE4BQ07343 736 aa19.69■□□□□ 0.74
CDT1-202ENST00000562747 KANSL2Q9H9L4 492 aa19.69■□□□□ 0.74
CDT1-202ENST00000562747 ARHGEF10LQ9HCE6 1279 aa19.69■□□□□ 0.74
CDT1-202ENST00000562747 RBPJLQ9UBG7 517 aa19.69■□□□□ 0.74
CDT1-202ENST00000562747 OGDHLQ9ULD0 1010 aa19.69■□□□□ 0.74
CDT1-202ENST00000562747 PFASO15067 1338 aa19.69■□□□□ 0.74
CDT1-202ENST00000562747 PRKAR2AP13861 404 aaKnown RBP19.68■□□□□ 0.74
CDT1-202ENST00000562747 Q3C1V9 767 aa19.68■□□□□ 0.74
CDT1-202ENST00000562747 ZNF444Q8N0Y2 327 aaPredicted RBP19.68■□□□□ 0.74
CDT1-202ENST00000562747 STK11IPQ8N1F8 1099 aa19.68■□□□□ 0.74
CDT1-202ENST00000562747 NBPF3Q9H094 633 aa19.68■□□□□ 0.74
CDT1-202ENST00000562747 PORCNQ9H237 461 aa19.68■□□□□ 0.74
CDT1-202ENST00000562747 C11orf49Q9H6J7 331 aa19.68■□□□□ 0.74
CDT1-202ENST00000562747 SH2D4AQ9H788 454 aa19.68■□□□□ 0.74
CDT1-202ENST00000562747 ANAPC4Q9UJX5 808 aa19.68■□□□□ 0.74
CDT1-202ENST00000562747 GREB1LQ9C091 1923 aaPredicted RBP19.68■□□□□ 0.74
CDT1-202ENST00000562747 COL6A3P12111 3177 aa19.67■□□□□ 0.74
CDT1-202ENST00000562747 A0A1W2PRG0 241 aa19.67■□□□□ 0.74
CDT1-202ENST00000562747 FGAP02671 866 aa19.67■□□□□ 0.74
CDT1-202ENST00000562747 ZYXQ15942 572 aaKnown RBP19.67■□□□□ 0.74
CDT1-202ENST00000562747 CCL14Q16627 93 aa19.67■□□□□ 0.74
CDT1-202ENST00000562747 GPRC5AQ8NFJ5 357 aa19.67■□□□□ 0.74
CDT1-202ENST00000562747 USP6NLQ92738 828 aa19.67■□□□□ 0.74
CDT1-202ENST00000562747 BMP8BP34820 402 aa19.66■□□□□ 0.74
CDT1-202ENST00000562747 ERVK-9P63128 1117 aa19.66■□□□□ 0.74
CDT1-202ENST00000562747 ERVK-24P63145 666 aa19.66■□□□□ 0.74
CDT1-202ENST00000562747 ERICH6BQ5W0A0 696 aa19.66■□□□□ 0.74
CDT1-202ENST00000562747 SIAH1Q8IUQ4 282 aa19.66■□□□□ 0.74
CDT1-202ENST00000562747 NUDT12Q9BQG2 462 aa19.66■□□□□ 0.74
CDT1-202ENST00000562747 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.66■□□□□ 0.74
CDT1-202ENST00000562747 TMX2Q9Y320 296 aa19.66■□□□□ 0.74
CDT1-202ENST00000562747 RAD50Q92878 1312 aa19.66■□□□□ 0.74
CDT1-202ENST00000562747 USP17L15C9J2P7 530 aa19.65■□□□□ 0.74
CDT1-202ENST00000562747 USP17L13C9JLJ4 530 aa19.65■□□□□ 0.74
CDT1-202ENST00000562747 USP17L11C9JVI0 530 aa19.65■□□□□ 0.74
CDT1-202ENST00000562747 USP17L18D6R9N7 530 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms