RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 GCC1Q96CN9 775 aa11.15□□□□□ -0.62
CHRFAM7A-204ENST00000562729 ZNF333Q96JL9 665 aa11.15□□□□□ -0.62
CHRFAM7A-204ENST00000562729 STK24Q9Y6E0 443 aa11.15□□□□□ -0.62
CHRFAM7A-204ENST00000562729 MYH8P13535 1937 aa11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 C2orf72A6NCS6 295 aa11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 USP17L12C9JPN9 530 aa11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 USP17L21D6R901 530 aa11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 RNF113AO15541 343 aaKnown RBP11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 RAD21O60216 631 aa11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 CYP2D6P10635 497 aa11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 SHMT1P34896 483 aa11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 TDO2P48775 406 aa11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 HERVK_113P62684 666 aa11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 JAG1P78504 1218 aa11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 ATP2B2Q01814 1243 aa11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 GPRC5AQ8NFJ5 357 aa11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 GTF3C2Q8WUA4 911 aaPredicted RBP11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 APPBP2Q92624 585 aa11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 PAGR1Q9BTK6 254 aa11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 PUS7LQ9H0K6 701 aaKnown RBP11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 RWDD1Q9H446 243 aaPredicted RBP11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 SH2D4AQ9H788 454 aa11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 ARHGEF10LQ9HCE6 1279 aa11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 ARPP21Q9UBL0 812 aaPredicted RBP11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 MGAMO43451 1857 aa11.14□□□□□ -0.63
CHRFAM7A-204ENST00000562729 MINDY4BA8MYZ0 360 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 USP17L15C9J2P7 530 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 USP17L13C9JLJ4 530 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 USP17L11C9JVI0 530 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 USP17L18D6R9N7 530 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 USP17L22D6RA61 530 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 USP17L17D6RBQ6 530 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 USP17L19D6RCP7 530 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 USP17L20D6RJB6 530 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 ADCY3O60266 1144 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 GNAT2P19087 354 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 CTGFP29279 349 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 HOXA7P31268 230 aaPredicted RBP11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 FLT3LGP49771 235 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 USP17L24Q0WX57 530 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 SEPT2Q15019 361 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 WDR78Q5VTH9 848 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 TMEM179Q6ZVK1 233 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 STK11IPQ8N1F8 1099 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 DYNLL2Q96FJ2 89 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 P2RX7Q99572 595 aaKnown RBP11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 NACAP1Q9BZK3 213 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 TANGO6Q9C0B7 1094 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 KIAA1683Q9H0B3 1180 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 MKNK2Q9HBH9 465 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 ZNF287Q9HBT7 754 aa11.13□□□□□ -0.63
CHRFAM7A-204ENST00000562729 DDX60LQ5H9U9 1706 aaKnown RBP11.12□□□□□ -0.63
CHRFAM7A-204ENST00000562729 BAZ2AQ9UIF9 1905 aaKnown RBP11.12□□□□□ -0.63
CHRFAM7A-204ENST00000562729 CYP2D7A0A087X1C5 515 aa11.12□□□□□ -0.63
CHRFAM7A-204ENST00000562729 CHGBP05060 677 aa11.12□□□□□ -0.63
CHRFAM7A-204ENST00000562729 EN2P19622 333 aaPredicted RBP11.12□□□□□ -0.63
CHRFAM7A-204ENST00000562729 CCNA1P78396 465 aa11.12□□□□□ -0.63
CHRFAM7A-204ENST00000562729 ICA1Q05084 483 aa11.12□□□□□ -0.63
CHRFAM7A-204ENST00000562729 HDAC1Q13547 482 aaPredicted RBP11.12□□□□□ -0.63
CHRFAM7A-204ENST00000562729 C12orf60Q5U649 245 aa11.12□□□□□ -0.63
CHRFAM7A-204ENST00000562729 B4GALNT3Q6L9W6 998 aa11.12□□□□□ -0.63
CHRFAM7A-204ENST00000562729 SLC44A5Q8NCS7 719 aa11.12□□□□□ -0.63
CHRFAM7A-204ENST00000562729 NKX2-3Q8TAU0 364 aa11.12□□□□□ -0.63
CHRFAM7A-204ENST00000562729 ACER1Q8TDN7 264 aa11.12□□□□□ -0.63
CHRFAM7A-204ENST00000562729 CCDC17Q96LX7 622 aa11.12□□□□□ -0.63
CHRFAM7A-204ENST00000562729 RNF208Q9H0X6 261 aa11.12□□□□□ -0.63
CHRFAM7A-204ENST00000562729 RPAP3Q9H6T3 665 aaPredicted RBP11.12□□□□□ -0.63
CHRFAM7A-204ENST00000562729 EMILIN3Q9NT22 766 aa11.12□□□□□ -0.63
CHRFAM7A-204ENST00000562729 GABRQQ9UN88 632 aa11.12□□□□□ -0.63
CHRFAM7A-204ENST00000562729 TRIM6-TRIM34B2RNG4 842 aa11.11□□□□□ -0.63
CHRFAM7A-204ENST00000562729 GPAA1O43292 621 aa11.11□□□□□ -0.63
CHRFAM7A-204ENST00000562729 SLC3A2P08195 630 aaKnown RBP11.11□□□□□ -0.63
CHRFAM7A-204ENST00000562729 NUDT7P0C024 238 aa11.11□□□□□ -0.63
CHRFAM7A-204ENST00000562729 CCL5P13501 91 aa11.11□□□□□ -0.63
CHRFAM7A-204ENST00000562729 ELNP15502 786 aa11.11□□□□□ -0.63
CHRFAM7A-204ENST00000562729 VCAM1P19320 739 aa11.11□□□□□ -0.63
CHRFAM7A-204ENST00000562729 CDK8P49336 464 aa11.11□□□□□ -0.63
CHRFAM7A-204ENST00000562729 GABPAQ06546 454 aa11.11□□□□□ -0.63
CHRFAM7A-204ENST00000562729 CTR9Q6PD62 1173 aa11.11□□□□□ -0.63
CHRFAM7A-204ENST00000562729 OTUD7AQ8TE49 926 aaPredicted RBP11.11□□□□□ -0.63
CHRFAM7A-204ENST00000562729 STRBPQ96SI9 672 aaKnown RBP11.11□□□□□ -0.63
CHRFAM7A-204ENST00000562729 HTTP42858 3142 aa11.11□□□□□ -0.63
CHRFAM7A-204ENST00000562729 CENPFP49454 3210 aa11.11□□□□□ -0.63
CHRFAM7A-204ENST00000562729 M0R2C6 588 aa11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 AKR1B1P15121 316 aa11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 MAPK4P31152 587 aa11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 ERVK-9P63128 1117 aa11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 ERVK-24P63145 666 aa11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 GIMAP6Q6P9H5 292 aa11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 POTEEQ6S8J3 1075 aa11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 C16orf86Q6ZW13 317 aa11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 ZNF444Q8N0Y2 327 aaPredicted RBP11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 PI4K2BQ8TCG2 481 aa11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 SOCS4Q8WXH5 440 aa11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 OSBP2Q969R2 916 aa11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 EVI5LQ96CN4 794 aa11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 C12orf42Q96LP6 360 aa11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 NUDT12Q9BQG2 462 aa11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 LNPKQ9C0E8 428 aa11.1□□□□□ -0.63
CHRFAM7A-204ENST00000562729 NAPBQ9H115 298 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms