RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 FMNL1O95466 1100 aaPredicted RBP18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 SLC3A2P08195 630 aaKnown RBP18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 PDE4BQ07343 736 aa18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 USP17L24Q0WX57 530 aa18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 FAM47AQ5JRC9 791 aa18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 CATSPERGQ6ZRH7 1159 aa18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 ZNF444Q8N0Y2 327 aaPredicted RBP18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 ARMC5Q96C12 935 aa18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 ZNF287Q9HBT7 754 aa18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 ANAPC4Q9UJX5 808 aa18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 PLIN4Q96Q06 1357 aa18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 MFAP1P55081 439 aaKnown RBP18.28■□□□□ 0.52
CCNDBP1-203ENST00000562553 FCGRTP55899 365 aa18.28■□□□□ 0.52
CCNDBP1-203ENST00000562553 SPICE1Q8N0Z3 855 aa18.28■□□□□ 0.52
CCNDBP1-203ENST00000562553 VCPKMTQ9H867 229 aa18.28■□□□□ 0.52
CCNDBP1-203ENST00000562553 MORF4L1Q9UBU8 362 aa18.28■□□□□ 0.52
CCNDBP1-203ENST00000562553 A0A0G2JMZ2 1700 aa18.27■□□□□ 0.52
CCNDBP1-203ENST00000562553 NEFLP07196 543 aa18.27■□□□□ 0.52
CCNDBP1-203ENST00000562553 HAND2P61296 217 aa18.27■□□□□ 0.52
CCNDBP1-203ENST00000562553 PRPF38BQ5VTL8 546 aaKnown RBP18.27■□□□□ 0.52
CCNDBP1-203ENST00000562553 CEP95Q96GE4 821 aa18.27■□□□□ 0.52
CCNDBP1-203ENST00000562553 NBPF3Q9H094 633 aa18.27■□□□□ 0.52
CCNDBP1-203ENST00000562553 SH2D4AQ9H788 454 aa18.27■□□□□ 0.52
CCNDBP1-203ENST00000562553 RBPJLQ9UBG7 517 aa18.27■□□□□ 0.52
CCNDBP1-203ENST00000562553 SRRDQ9UH36 339 aa18.27■□□□□ 0.52
CCNDBP1-203ENST00000562553 MYPNQ86TC9 1320 aa18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 PLXNB2O15031 1838 aa18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 SPDYE16A6NNV3 312 aaPredicted RBP18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 CNMDO75829 334 aa18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 GNRH1P01148 92 aa18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 TSPY3P0CV98 308 aa18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 TSPY8P0CW00 308 aa18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 CHMLP26374 656 aa18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 TFAP4Q01664 338 aa18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 PRKCZQ05513 592 aa18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 NEDD1Q8NHV4 660 aa18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 LPAR1Q92633 364 aa18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 CCDC136Q96JN2 1154 aa18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 PAGR1Q9BTK6 254 aa18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 TANGO6Q9C0B7 1094 aa18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 NYAP2Q9P242 653 aa18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 GABRQQ9UN88 632 aa18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 KIAA0100Q14667 2235 aaKnown RBP18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 COL11A1P12107 1806 aaPredicted RBP18.26■□□□□ 0.51
CCNDBP1-203ENST00000562553 FGRP09769 529 aa18.25■□□□□ 0.51
CCNDBP1-203ENST00000562553 Q3C1V9 767 aa18.25■□□□□ 0.51
CCNDBP1-203ENST00000562553 TBC1D10CQ8IV04 446 aa18.25■□□□□ 0.51
CCNDBP1-203ENST00000562553 MTMR4Q9NYA4 1195 aa18.25■□□□□ 0.51
CCNDBP1-203ENST00000562553 CLIP2Q9UDT6 1046 aa18.25■□□□□ 0.51
CCNDBP1-203ENST00000562553 MKI67P46013 3256 aaKnown RBP18.24■□□□□ 0.51
CCNDBP1-203ENST00000562553 TNPO2O14787 897 aaKnown RBP18.24■□□□□ 0.51
CCNDBP1-203ENST00000562553 WDR46O15213 610 aaKnown RBP18.24■□□□□ 0.51
CCNDBP1-203ENST00000562553 ORC4O43929 436 aa18.24■□□□□ 0.51
CCNDBP1-203ENST00000562553 RAD21O60216 631 aa18.24■□□□□ 0.51
CCNDBP1-203ENST00000562553 HOXD10P28358 340 aa18.24■□□□□ 0.51
CCNDBP1-203ENST00000562553 PRMT2P55345 433 aa18.24■□□□□ 0.51
CCNDBP1-203ENST00000562553 ERVK-9P63128 1117 aa18.24■□□□□ 0.51
CCNDBP1-203ENST00000562553 ERVK-24P63145 666 aa18.24■□□□□ 0.51
CCNDBP1-203ENST00000562553 LRRC47Q8N1G4 583 aaKnown RBP18.24■□□□□ 0.51
CCNDBP1-203ENST00000562553 GPRC5AQ8NFJ5 357 aa18.24■□□□□ 0.51
CCNDBP1-203ENST00000562553 NKX2-3Q8TAU0 364 aa18.24■□□□□ 0.51
CCNDBP1-203ENST00000562553 GTF3C2Q8WUA4 911 aaPredicted RBP18.24■□□□□ 0.51
CCNDBP1-203ENST00000562553 DSCC1Q9BVC3 393 aa18.24■□□□□ 0.51
CCNDBP1-203ENST00000562553 GOPCQ9HD26 462 aa18.24■□□□□ 0.51
CCNDBP1-203ENST00000562553 RAD50Q92878 1312 aa18.23■□□□□ 0.51
CCNDBP1-203ENST00000562553 BRCA2P51587 3418 aa18.23■□□□□ 0.51
CCNDBP1-203ENST00000562553 POTEFA5A3E0 1075 aa18.23■□□□□ 0.51
CCNDBP1-203ENST00000562553 TSPY2A6NKD2 308 aa18.23■□□□□ 0.51
CCNDBP1-203ENST00000562553 RANBP6O60518 1105 aaKnown RBP18.23■□□□□ 0.51
CCNDBP1-203ENST00000562553 NMT2O60551 498 aa18.23■□□□□ 0.51
CCNDBP1-203ENST00000562553 CENPBP07199 599 aaPredicted RBP18.23■□□□□ 0.51
CCNDBP1-203ENST00000562553 RRP12Q5JTH9 1297 aaKnown RBP18.23■□□□□ 0.51
CCNDBP1-203ENST00000562553 LBX2Q6XYB7 198 aa18.23■□□□□ 0.51
CCNDBP1-203ENST00000562553 NBPF11Q86T75 865 aa18.23■□□□□ 0.51
CCNDBP1-203ENST00000562553 NUP88Q99567 741 aaPredicted RBP18.23■□□□□ 0.51
CCNDBP1-203ENST00000562553 PORCNQ9H237 461 aa18.23■□□□□ 0.51
CCNDBP1-203ENST00000562553 TOMM22Q9NS69 142 aa18.23■□□□□ 0.51
CCNDBP1-203ENST00000562553 BTBD7Q9P203 1132 aa18.23■□□□□ 0.51
CCNDBP1-203ENST00000562553 RABGAP1Q9Y3P9 1069 aa18.23■□□□□ 0.51
CCNDBP1-203ENST00000562553 FLOT1O75955 427 aa18.22■□□□□ 0.51
CCNDBP1-203ENST00000562553 TTLL1O95922 423 aa18.22■□□□□ 0.51
CCNDBP1-203ENST00000562553 NDUFB10O96000 172 aa18.22■□□□□ 0.51
CCNDBP1-203ENST00000562553 FLT3LGP49771 235 aa18.22■□□□□ 0.51
CCNDBP1-203ENST00000562553 COG2Q14746 738 aa18.22■□□□□ 0.51
CCNDBP1-203ENST00000562553 SLC9C1Q4G0N8 1177 aa18.22■□□□□ 0.51
CCNDBP1-203ENST00000562553 FAM83BQ5T0W9 1011 aa18.22■□□□□ 0.51
CCNDBP1-203ENST00000562553 SAMD1Q6SPF0 538 aaPredicted RBP18.22■□□□□ 0.51
CCNDBP1-203ENST00000562553 RAET1EQ8TD07 263 aa18.22■□□□□ 0.51
CCNDBP1-203ENST00000562553 SH3TC2Q8TF17 1288 aa18.22■□□□□ 0.51
CCNDBP1-203ENST00000562553 STAG1Q8WVM7 1258 aa18.22■□□□□ 0.51
CCNDBP1-203ENST00000562553 MKL1Q969V6 931 aa18.22■□□□□ 0.51
CCNDBP1-203ENST00000562553 ZNF333Q96JL9 665 aa18.22■□□□□ 0.51
CCNDBP1-203ENST00000562553 IL17RBQ9NRM6 502 aa18.22■□□□□ 0.51
CCNDBP1-203ENST00000562553 FBXO28Q9NVF7 368 aa18.22■□□□□ 0.51
CCNDBP1-203ENST00000562553 NEDD4P46934 1319 aa18.22■□□□□ 0.51
CCNDBP1-203ENST00000562553 F5H6K3 240 aa18.21■□□□□ 0.51
CCNDBP1-203ENST00000562553 DSG3P32926 999 aa18.21■□□□□ 0.51
CCNDBP1-203ENST00000562553 KLRC3Q07444 240 aa18.21■□□□□ 0.51
CCNDBP1-203ENST00000562553 AKNAD1Q5T1N1 836 aa18.21■□□□□ 0.51
CCNDBP1-203ENST00000562553 RUFY2Q8WXA3 655 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms