RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 TMOD4Q9NZQ9 345 aa15.87■□□□□ 0.13
CDH1-204ENST00000562118 COL11A1P12107 1806 aaPredicted RBP15.87■□□□□ 0.13
CDH1-204ENST00000562118 E7EWF7 191 aa15.86■□□□□ 0.13
CDH1-204ENST00000562118 WDR46O15213 610 aaKnown RBP15.86■□□□□ 0.13
CDH1-204ENST00000562118 RANBP6O60518 1105 aaKnown RBP15.86■□□□□ 0.13
CDH1-204ENST00000562118 REC8O95072 547 aa15.86■□□□□ 0.13
CDH1-204ENST00000562118 BCRP11274 1271 aa15.86■□□□□ 0.13
CDH1-204ENST00000562118 PABPC4Q13310 644 aaKnown RBP eCLIP15.86■□□□□ 0.13
CDH1-204ENST00000562118 TAF1CQ15572 869 aaPredicted RBP15.86■□□□□ 0.13
CDH1-204ENST00000562118 POTEEQ6S8J3 1075 aa15.86■□□□□ 0.13
CDH1-204ENST00000562118 GADL1Q6ZQY3 521 aa15.86■□□□□ 0.13
CDH1-204ENST00000562118 CATSPERGQ6ZRH7 1159 aa15.86■□□□□ 0.13
CDH1-204ENST00000562118 MB21D2Q8IYB1 491 aaPredicted RBP15.86■□□□□ 0.13
CDH1-204ENST00000562118 IL17RAQ96F46 866 aa15.86■□□□□ 0.13
CDH1-204ENST00000562118 PARK7Q99497 189 aaKnown RBP15.86■□□□□ 0.13
CDH1-204ENST00000562118 MTA3Q9BTC8 594 aa15.86■□□□□ 0.13
CDH1-204ENST00000562118 PRDM10Q9NQV6 1147 aa15.86■□□□□ 0.13
CDH1-204ENST00000562118 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.86■□□□□ 0.13
CDH1-204ENST00000562118 GTF3C3Q9Y5Q9 886 aa15.86■□□□□ 0.13
CDH1-204ENST00000562118 MYPNQ86TC9 1320 aa15.86■□□□□ 0.13
CDH1-204ENST00000562118 CASP8AP2Q9UKL3 1982 aa15.86■□□□□ 0.13
CDH1-204ENST00000562118 ZSWIM8A7E2V4 1837 aa15.85■□□□□ 0.13
CDH1-204ENST00000562118 B4E1Z4 1266 aa15.85■□□□□ 0.13
CDH1-204ENST00000562118 NMT2O60551 498 aa15.85■□□□□ 0.13
CDH1-204ENST00000562118 KDM4AO75164 1064 aa15.85■□□□□ 0.13
CDH1-204ENST00000562118 HSPA4P34932 840 aa15.85■□□□□ 0.13
CDH1-204ENST00000562118 DGKHQ86XP1 1220 aa15.85■□□□□ 0.13
CDH1-204ENST00000562118 FEZ1Q99689 392 aa15.85■□□□□ 0.13
CDH1-204ENST00000562118 ASCC2Q9H1I8 757 aaPredicted RBP15.85■□□□□ 0.13
CDH1-204ENST00000562118 ZFYVE28Q9HCC9 887 aa15.85■□□□□ 0.13
CDH1-204ENST00000562118 ZSWIM5Q9P217 1185 aa15.85■□□□□ 0.13
CDH1-204ENST00000562118 PNMA3Q9UL41 463 aa15.85■□□□□ 0.13
CDH1-204ENST00000562118 USP17L15C9J2P7 530 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 USP17L13C9JLJ4 530 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 USP17L11C9JVI0 530 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 USP17L18D6R9N7 530 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 USP17L22D6RA61 530 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 USP17L17D6RBQ6 530 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 USP17L19D6RCP7 530 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 USP17L20D6RJB6 530 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 GPR25O00155 361 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 TBC1D8O95759 1140 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 SNHG28P0DPA3 235 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 USP17L24Q0WX57 530 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 SEC23AQ15436 765 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 CCDC178Q5BJE1 867 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 CYB5R4Q7L1T6 521 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 GMCL1Q96IK5 515 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 USP26Q9BXU7 913 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 GOPCQ9HD26 462 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 MORF4L1Q9UBU8 362 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 CLIP2Q9UDT6 1046 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 ADAMTS5Q9UNA0 930 aa15.84■□□□□ 0.13
CDH1-204ENST00000562118 PLXNB2O15031 1838 aa15.83■□□□□ 0.12
CDH1-204ENST00000562118 F5H6K3 240 aa15.83■□□□□ 0.12
CDH1-204ENST00000562118 NDUFB10O96000 172 aa15.83■□□□□ 0.12
CDH1-204ENST00000562118 CYP2C8P10632 490 aa15.83■□□□□ 0.12
CDH1-204ENST00000562118 ANTXR2P58335 489 aa15.83■□□□□ 0.12
CDH1-204ENST00000562118 KLRC3Q07444 240 aa15.83■□□□□ 0.12
CDH1-204ENST00000562118 COL9A3Q14050 684 aaPredicted RBP15.83■□□□□ 0.12
CDH1-204ENST00000562118 C8orf34Q49A92 452 aa15.83■□□□□ 0.12
CDH1-204ENST00000562118 RRP12Q5JTH9 1297 aaKnown RBP15.83■□□□□ 0.12
CDH1-204ENST00000562118 RASEFQ8IZ41 740 aa15.83■□□□□ 0.12
CDH1-204ENST00000562118 ENAHQ8N8S7 591 aaPredicted RBP15.83■□□□□ 0.12
CDH1-204ENST00000562118 NCOA7Q8NI08 942 aa15.83■□□□□ 0.12
CDH1-204ENST00000562118 GTF3C2Q8WUA4 911 aaPredicted RBP15.83■□□□□ 0.12
CDH1-204ENST00000562118 RPAP3Q9H6T3 665 aaPredicted RBP15.83■□□□□ 0.12
CDH1-204ENST00000562118 WDR19Q8NEZ3 1342 aa15.83■□□□□ 0.12
CDH1-204ENST00000562118 ZNF236Q9UL36 1845 aa15.82■□□□□ 0.12
CDH1-204ENST00000562118 PLA2G6O60733 806 aa15.82■□□□□ 0.12
CDH1-204ENST00000562118 TOP1P11387 765 aaKnown RBP15.82■□□□□ 0.12
CDH1-204ENST00000562118 OSBPP22059 807 aa15.82■□□□□ 0.12
CDH1-204ENST00000562118 GCLCP48506 637 aaPredicted RBP15.82■□□□□ 0.12
CDH1-204ENST00000562118 HERVK_113P62684 666 aa15.82■□□□□ 0.12
CDH1-204ENST00000562118 ZYXQ15942 572 aaKnown RBP15.82■□□□□ 0.12
CDH1-204ENST00000562118 FAM110CQ1W6H9 321 aa15.82■□□□□ 0.12
CDH1-204ENST00000562118 RNF20Q5VTR2 975 aa15.82■□□□□ 0.12
CDH1-204ENST00000562118 IQCA1Q86XH1 822 aa15.82■□□□□ 0.12
CDH1-204ENST00000562118 ZNF296Q8WUU4 475 aaPredicted RBP15.82■□□□□ 0.12
CDH1-204ENST00000562118 ZSCAN10Q96SZ4 725 aaPredicted RBP15.82■□□□□ 0.12
CDH1-204ENST00000562118 TMEM47Q9BQJ4 181 aa15.82■□□□□ 0.12
CDH1-204ENST00000562118 TSKSQ9UJT2 592 aa15.82■□□□□ 0.12
CDH1-204ENST00000562118 SPDYE16A6NNV3 312 aaPredicted RBP15.81■□□□□ 0.12
CDH1-204ENST00000562118 TNKSO95271 1327 aa15.81■□□□□ 0.12
CDH1-204ENST00000562118 LBX1P52954 281 aa15.81■□□□□ 0.12
CDH1-204ENST00000562118 CAP1Q01518 475 aa15.81■□□□□ 0.12
CDH1-204ENST00000562118 LRRC47Q8N1G4 583 aaKnown RBP15.81■□□□□ 0.12
CDH1-204ENST00000562118 P2RX7Q99572 595 aaKnown RBP15.81■□□□□ 0.12
CDH1-204ENST00000562118 STX8Q9UNK0 236 aa15.81■□□□□ 0.12
CDH1-204ENST00000562118 CNMDO75829 334 aa15.8■□□□□ 0.12
CDH1-204ENST00000562118 TRDNQ13061 729 aa15.8■□□□□ 0.12
CDH1-204ENST00000562118 SPICE1Q8N0Z3 855 aa15.8■□□□□ 0.12
CDH1-204ENST00000562118 FBXL16Q8N461 479 aa15.8■□□□□ 0.12
CDH1-204ENST00000562118 REPS2Q8NFH8 660 aa15.8■□□□□ 0.12
CDH1-204ENST00000562118 IGDCC4Q8TDY8 1250 aa15.8■□□□□ 0.12
CDH1-204ENST00000562118 TOMM22Q9NS69 142 aa15.8■□□□□ 0.12
CDH1-204ENST00000562118 DOCK3Q8IZD9 2030 aa15.79■□□□□ 0.12
CDH1-204ENST00000562118 EIF5BO60841 1220 aaKnown RBP15.79■□□□□ 0.12
CDH1-204ENST00000562118 FKTNO75072 461 aa15.79■□□□□ 0.12
CDH1-204ENST00000562118 PDHBP11177 359 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms