RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 TREML2Q5T2D2 321 aa16.49■□□□□ 0.23
IFT140-205ENST00000561954 GPAT2Q6NUI2 795 aa16.49■□□□□ 0.23
IFT140-205ENST00000561954 GMCL1P1Q8NEA9 526 aa16.49■□□□□ 0.23
IFT140-205ENST00000561954 SMCR8Q8TEV9 937 aaPredicted RBP16.49■□□□□ 0.23
IFT140-205ENST00000561954 GTF3C2Q8WUA4 911 aaPredicted RBP16.49■□□□□ 0.23
IFT140-205ENST00000561954 UBAC1Q9BSL1 405 aa16.49■□□□□ 0.23
IFT140-205ENST00000561954 INCENPQ9NQS7 918 aa16.49■□□□□ 0.23
IFT140-205ENST00000561954 EMILIN3Q9NT22 766 aa16.49■□□□□ 0.23
IFT140-205ENST00000561954 TACC3Q9Y6A5 838 aa16.49■□□□□ 0.23
IFT140-205ENST00000561954 HOXA7P31268 230 aaPredicted RBP16.48■□□□□ 0.23
IFT140-205ENST00000561954 CRHR2Q13324 411 aa16.48■□□□□ 0.23
IFT140-205ENST00000561954 MKL1Q969V6 931 aa16.48■□□□□ 0.23
IFT140-205ENST00000561954 CLIP2Q9UDT6 1046 aa16.48■□□□□ 0.23
IFT140-205ENST00000561954 USP17L15C9J2P7 530 aa16.47■□□□□ 0.23
IFT140-205ENST00000561954 USP17L13C9JLJ4 530 aa16.47■□□□□ 0.23
IFT140-205ENST00000561954 USP17L11C9JVI0 530 aa16.47■□□□□ 0.23
IFT140-205ENST00000561954 USP17L18D6R9N7 530 aa16.47■□□□□ 0.23
IFT140-205ENST00000561954 USP17L22D6RA61 530 aa16.47■□□□□ 0.23
IFT140-205ENST00000561954 USP17L17D6RBQ6 530 aa16.47■□□□□ 0.23
IFT140-205ENST00000561954 USP17L19D6RCP7 530 aa16.47■□□□□ 0.23
IFT140-205ENST00000561954 USP17L20D6RJB6 530 aa16.47■□□□□ 0.23
IFT140-205ENST00000561954 FOXN1O15353 648 aa16.47■□□□□ 0.23
IFT140-205ENST00000561954 NOVP48745 357 aa16.47■□□□□ 0.23
IFT140-205ENST00000561954 USP17L24Q0WX57 530 aa16.47■□□□□ 0.23
IFT140-205ENST00000561954 SIAH1Q8IUQ4 282 aa16.47■□□□□ 0.23
IFT140-205ENST00000561954 LRRC47Q8N1G4 583 aaKnown RBP16.47■□□□□ 0.23
IFT140-205ENST00000561954 TTC14Q96N46 770 aa16.47■□□□□ 0.23
IFT140-205ENST00000561954 ZSCAN10Q96SZ4 725 aaPredicted RBP16.47■□□□□ 0.23
IFT140-205ENST00000561954 RPAP3Q9H6T3 665 aaPredicted RBP16.47■□□□□ 0.23
IFT140-205ENST00000561954 IL17RBQ9NRM6 502 aa16.47■□□□□ 0.23
IFT140-205ENST00000561954 TNKSO95271 1327 aa16.46■□□□□ 0.23
IFT140-205ENST00000561954 ERICH2A1L162 156 aa16.46■□□□□ 0.23
IFT140-205ENST00000561954 RAD21O60216 631 aa16.46■□□□□ 0.23
IFT140-205ENST00000561954 TLR2O60603 784 aa16.46■□□□□ 0.23
IFT140-205ENST00000561954 TOP1P11387 765 aaKnown RBP16.46■□□□□ 0.23
IFT140-205ENST00000561954 HSPA4P34932 840 aa16.46■□□□□ 0.23
IFT140-205ENST00000561954 DGKZQ13574 1117 aa16.46■□□□□ 0.23
IFT140-205ENST00000561954 DGKHQ86XP1 1220 aa16.46■□□□□ 0.23
IFT140-205ENST00000561954 MTA3Q9BTC8 594 aa16.46■□□□□ 0.23
IFT140-205ENST00000561954 TANGO6Q9C0B7 1094 aa16.46■□□□□ 0.23
IFT140-205ENST00000561954 MYPNQ86TC9 1320 aa16.45■□□□□ 0.22
IFT140-205ENST00000561954 F5H6K3 240 aa16.45■□□□□ 0.22
IFT140-205ENST00000561954 NMT2O60551 498 aa16.45■□□□□ 0.22
IFT140-205ENST00000561954 NDUFB10O96000 172 aa16.45■□□□□ 0.22
IFT140-205ENST00000561954 HMGB1P09429 215 aaKnown RBP16.45■□□□□ 0.22
IFT140-205ENST00000561954 HSPA8P11142 646 aaKnown RBP16.45■□□□□ 0.22
IFT140-205ENST00000561954 GCLCP48506 637 aaPredicted RBP16.45■□□□□ 0.22
IFT140-205ENST00000561954 KLRC3Q07444 240 aa16.45■□□□□ 0.22
IFT140-205ENST00000561954 TSGA10IPQ3SY00 556 aa16.45■□□□□ 0.22
IFT140-205ENST00000561954 STOX1Q6ZVD7 989 aa16.45■□□□□ 0.22
IFT140-205ENST00000561954 SPICE1Q8N0Z3 855 aa16.45■□□□□ 0.22
IFT140-205ENST00000561954 GMCL1Q96IK5 515 aa16.45■□□□□ 0.22
IFT140-205ENST00000561954 ASCC2Q9H1I8 757 aaPredicted RBP16.45■□□□□ 0.22
IFT140-205ENST00000561954 ZSWIM5Q9P217 1185 aa16.45■□□□□ 0.22
IFT140-205ENST00000561954 ADGRA2Q96PE1 1338 aa16.45■□□□□ 0.22
IFT140-205ENST00000561954 TBC1D8O95759 1140 aa16.44■□□□□ 0.22
IFT140-205ENST00000561954 CYP2C8P10632 490 aa16.44■□□□□ 0.22
IFT140-205ENST00000561954 MCM5P33992 734 aa16.44■□□□□ 0.22
IFT140-205ENST00000561954 MB21D2Q8IYB1 491 aaPredicted RBP16.44■□□□□ 0.22
IFT140-205ENST00000561954 KAT14Q9H8E8 782 aa16.44■□□□□ 0.22
IFT140-205ENST00000561954 TAF6LQ9Y6J9 622 aa16.44■□□□□ 0.22
IFT140-205ENST00000561954 WDR19Q8NEZ3 1342 aa16.44■□□□□ 0.22
IFT140-205ENST00000561954 MYH4Q9Y623 1939 aa16.43■□□□□ 0.22
IFT140-205ENST00000561954 GPR25O00155 361 aa16.43■□□□□ 0.22
IFT140-205ENST00000561954 SLC1A4P43007 532 aa16.43■□□□□ 0.22
IFT140-205ENST00000561954 HERVK_113P62684 666 aa16.43■□□□□ 0.22
IFT140-205ENST00000561954 IFIT1BQ5T764 474 aaKnown RBP16.43■□□□□ 0.22
IFT140-205ENST00000561954 SLFN13Q68D06 897 aa16.43■□□□□ 0.22
IFT140-205ENST00000561954 CATSPERGQ6ZRH7 1159 aa16.43■□□□□ 0.22
IFT140-205ENST00000561954 ENAHQ8N8S7 591 aaPredicted RBP16.43■□□□□ 0.22
IFT140-205ENST00000561954 DCAF4Q8WV16 495 aa16.43■□□□□ 0.22
IFT140-205ENST00000561954 KCNB2Q92953 911 aa16.43■□□□□ 0.22
IFT140-205ENST00000561954 TMEM47Q9BQJ4 181 aa16.43■□□□□ 0.22
IFT140-205ENST00000561954 ZKSCAN3Q9BRR0 538 aa16.43■□□□□ 0.22
IFT140-205ENST00000561954 TSKSQ9UJT2 592 aa16.43■□□□□ 0.22
IFT140-205ENST00000561954 IFIT3O14879 490 aaKnown RBP16.42■□□□□ 0.22
IFT140-205ENST00000561954 FLOT1O75955 427 aa16.42■□□□□ 0.22
IFT140-205ENST00000561954 BMP3P12645 472 aa16.42■□□□□ 0.22
IFT140-205ENST00000561954 FAM110CQ1W6H9 321 aa16.42■□□□□ 0.22
IFT140-205ENST00000561954 FAM83BQ5T0W9 1011 aa16.42■□□□□ 0.22
IFT140-205ENST00000561954 RCSD1Q6JBY9 416 aa16.42■□□□□ 0.22
IFT140-205ENST00000561954 LBX2Q6XYB7 198 aa16.42■□□□□ 0.22
IFT140-205ENST00000561954 CYB5R4Q7L1T6 521 aa16.42■□□□□ 0.22
IFT140-205ENST00000561954 MB21D1Q8N884 522 aa16.42■□□□□ 0.22
IFT140-205ENST00000561954 ANKS1AQ92625 1134 aa16.42■□□□□ 0.22
IFT140-205ENST00000561954 TMEM87BQ96K49 555 aa16.42■□□□□ 0.22
IFT140-205ENST00000561954 NEK1Q96PY6 1258 aa16.42■□□□□ 0.22
IFT140-205ENST00000561954 ISY1Q9ULR0 285 aaKnown RBP16.42■□□□□ 0.22
IFT140-205ENST00000561954 PRC1O43663 620 aa16.41■□□□□ 0.22
IFT140-205ENST00000561954 FKTNO75072 461 aa16.41■□□□□ 0.22
IFT140-205ENST00000561954 PSMA5P28066 241 aa16.41■□□□□ 0.22
IFT140-205ENST00000561954 COG2Q14746 738 aa16.41■□□□□ 0.22
IFT140-205ENST00000561954 WTAPQ15007 396 aa16.41■□□□□ 0.22
IFT140-205ENST00000561954 ARHGEF6Q15052 776 aa16.41■□□□□ 0.22
IFT140-205ENST00000561954 C8orf34Q49A92 452 aa16.41■□□□□ 0.22
IFT140-205ENST00000561954 TMEM67Q5HYA8 995 aa16.41■□□□□ 0.22
IFT140-205ENST00000561954 KIAA1755Q5JYT7 1200 aa16.41■□□□□ 0.22
IFT140-205ENST00000561954 PNMA1Q8ND90 353 aa16.41■□□□□ 0.22
IFT140-205ENST00000561954 ERO1AQ96HE7 468 aa16.41■□□□□ 0.22
IFT140-205ENST00000561954 USP26Q9BXU7 913 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms