RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 ADD1P35611 737 aaKnown RBP7.64□□□□□ -1.19
CAPN3-210ENST00000561817 FGD1P98174 961 aa7.64□□□□□ -1.19
CAPN3-210ENST00000561817 KIAA2012Q0VF49 1180 aa7.64□□□□□ -1.19
CAPN3-210ENST00000561817 KLHL40Q2TBA0 621 aa7.64□□□□□ -1.19
CAPN3-210ENST00000561817 SKOR2Q2VWA4 1001 aaPredicted RBP7.64□□□□□ -1.19
CAPN3-210ENST00000561817 DACT2Q5SW24 774 aa7.64□□□□□ -1.19
CAPN3-210ENST00000561817 PODNQ7Z5L7 613 aa7.64□□□□□ -1.19
CAPN3-210ENST00000561817 RAB11FIP4Q86YS3 637 aa7.64□□□□□ -1.19
CAPN3-210ENST00000561817 CERS3Q8IU89 383 aa7.64□□□□□ -1.19
CAPN3-210ENST00000561817 ENAHQ8N8S7 591 aaPredicted RBP7.64□□□□□ -1.19
CAPN3-210ENST00000561817 DDX11Q96FC9 970 aa7.64□□□□□ -1.19
CAPN3-210ENST00000561817 MRIQ9BWK5 157 aa7.64□□□□□ -1.19
CAPN3-210ENST00000561817 FAM117AQ9C073 453 aa7.64□□□□□ -1.19
CAPN3-210ENST00000561817 FLT1P17948 1338 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 MYH15Q9Y2K3 1946 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 VPS37CA5D8V6 355 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-210ENST00000561817 YDJCA8MPS7 323 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 RNF223E7ERA6 249 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 TRIM66O15016 1216 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 ECE2O60344 883 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 RANBP6O60518 1105 aaKnown RBP7.63□□□□□ -1.19
CAPN3-210ENST00000561817 GADD45BO75293 160 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-210ENST00000561817 PRPF40AO75400 957 aaKnown RBP7.63□□□□□ -1.19
CAPN3-210ENST00000561817 NR1I2O75469 434 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 WDHD1O75717 1129 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-210ENST00000561817 YBX3P16989 372 aaKnown RBP eCLIP7.63□□□□□ -1.19
CAPN3-210ENST00000561817 NT5C2P49902 561 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 PLCD1P51178 756 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 TGFB2P61812 414 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 DNM1Q05193 864 aaKnown RBP7.63□□□□□ -1.19
CAPN3-210ENST00000561817 FUT2Q10981 343 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 DALRD3Q5D0E6 543 aaKnown RBP7.63□□□□□ -1.19
CAPN3-210ENST00000561817 STRIP1Q5VSL9 837 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 RCSD1Q6JBY9 416 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 APOBEC3HQ6NTF7 200 aaKnown RBP7.63□□□□□ -1.19
CAPN3-210ENST00000561817 HHIPL2Q6UWX4 724 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 NBPF11Q86T75 865 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 USP48Q86UV5 1035 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 TTLL6Q8N841 843 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 TGFBRAP1Q8WUH2 860 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 ANKS1AQ92625 1134 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 ESR2Q92731 530 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 CHMP4CQ96CF2 233 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 ZSCAN10Q96SZ4 725 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-210ENST00000561817 PSMD1Q99460 953 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 ZKSCAN3Q9BRR0 538 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 DBNDD1Q9H9R9 158 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 MCM9Q9NXL9 1143 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 PIM2Q9P1W9 311 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 CNPY2Q9Y2B0 182 aa7.63□□□□□ -1.19
CAPN3-210ENST00000561817 MYH1P12882 1939 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 TNKSO95271 1327 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 STK36Q9NRP7 1315 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 FSD2A1L4K1 749 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 GOLGA6L22H0YM25 854 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 ZBTB43O43298 467 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 C21orf2O43822 256 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 TLL1O43897 1013 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 DHX16O60231 1041 aaKnown RBP7.62□□□□□ -1.19
CAPN3-210ENST00000561817 PRDM1O75626 825 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 IFNAR1P17181 557 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 RXRAP19793 462 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 NOVP48745 357 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 METAP2P50579 478 aaKnown RBP eCLIP7.62□□□□□ -1.19
CAPN3-210ENST00000561817 HDLBPQ00341 1268 aaKnown RBP7.62□□□□□ -1.19
CAPN3-210ENST00000561817 GABPAQ06546 454 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 TROAPQ12815 778 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 WTAPQ15007 396 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 GRIPAP1Q4V328 841 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 RRP12Q5JTH9 1297 aaKnown RBP7.62□□□□□ -1.19
CAPN3-210ENST00000561817 RBM26Q5T8P6 1007 aaKnown RBP7.62□□□□□ -1.19
CAPN3-210ENST00000561817 FAM173BQ6P4H8 233 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 ARHGAP27Q6ZUM4 889 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 METTL3Q86U44 580 aaKnown RBP7.62□□□□□ -1.19
CAPN3-210ENST00000561817 MAPKAPK5Q8IW41 473 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 TEX11Q8IYF3 940 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 ZNF654Q8IZM8 581 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 STK11IPQ8N1F8 1099 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 TMTC2Q8N394 836 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 DYNLL2Q96FJ2 89 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 MYL10Q9BUA6 226 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 GDPD2Q9HCC8 539 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 DDX4Q9NQI0 724 aaKnown RBP7.62□□□□□ -1.19
CAPN3-210ENST00000561817 IL17RBQ9NRM6 502 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 TCP11L1Q9NUJ3 509 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 ORC3Q9UBD5 711 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-210ENST00000561817 SIPA1L1O43166 1804 aa7.62□□□□□ -1.19
CAPN3-210ENST00000561817 USP17L3A6NCW0 530 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 USP17L4A6NCW7 530 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 GOLGA8AA7E2F4 631 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 UBE2Q2LH0YL09 131 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 LCE2BO14633 110 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 NMT2O60551 498 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 PPFIA3O75145 1194 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 FMNL1O95466 1100 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-210ENST00000561817 RASA1P20936 1047 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 DEKP35659 375 aaKnown RBP7.61□□□□□ -1.19
CAPN3-210ENST00000561817 SLC19A1P41440 591 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 USP5P45974 858 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 RASSF7Q02833 373 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms