RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 HIP1RO75146 1068 aa11.3□□□□□ -0.6
GTF3C1-202ENST00000561623 ADRA2BP18089 450 aa11.3□□□□□ -0.6
GTF3C1-202ENST00000561623 CDC25BP30305 580 aa11.3□□□□□ -0.6
GTF3C1-202ENST00000561623 RASA3Q14644 834 aa11.3□□□□□ -0.6
GTF3C1-202ENST00000561623 FBXO38Q6PIJ6 1188 aa11.3□□□□□ -0.6
GTF3C1-202ENST00000561623 KBTBD3Q8NAB2 608 aa11.3□□□□□ -0.6
GTF3C1-202ENST00000561623 LSM14BQ9BX40 385 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-202ENST00000561623 CSRNP2Q9H175 543 aa11.3□□□□□ -0.6
GTF3C1-202ENST00000561623 FLT4P35916 1363 aa11.3□□□□□ -0.6
GTF3C1-202ENST00000561623 CALUO43852 315 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-202ENST00000561623 SLC8A1P32418 973 aa11.3□□□□□ -0.6
GTF3C1-202ENST00000561623 LARGE2Q8N3Y3 721 aa11.3□□□□□ -0.6
GTF3C1-202ENST00000561623 APPBP2Q92624 585 aa11.3□□□□□ -0.6
GTF3C1-202ENST00000561623 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-202ENST00000561623 SP4Q02446 784 aa11.3□□□□□ -0.6
GTF3C1-202ENST00000561623 BIRC3Q13489 604 aa11.3□□□□□ -0.6
GTF3C1-202ENST00000561623 EYA2O00167 538 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 DIXDC1Q155Q3 683 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 PHLDB2Q86SQ0 1253 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 GBP7Q8N8V2 638 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 KIFAP3Q92845 792 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 VPS37BQ9H9H4 285 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 ANKRD65E5RJM6 399 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 KRIT1O00522 736 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 GNPATO15228 680 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 ABCC1P33527 1531 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 TRAPPC3LQ5T215 181 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 ARHGAP24Q8N264 748 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 SMCR8Q8TEV9 937 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 FAM184BQ9ULE4 1060 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 H0YIN7 160 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 EFCAB13Q8IY85 973 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 STAG1Q8WVM7 1258 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 RAB3IPQ96QF0 476 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 JPH2Q9BR39 696 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 ZSWIM6Q9HCJ5 1215 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 DENND4BO75064 1496 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 HARSP12081 509 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 IL13P35225 146 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 CROCCP2Q86T23 111 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 SYCE1Q8N0S2 351 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 ZCRB1Q8TBF4 217 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 SNX29Q8TEQ0 813 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 FAM89AQ96GI7 184 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 PICK1Q9NRD5 415 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 KLHL14Q9P2G3 628 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 RNMTO43148 476 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 OPHN1O60890 802 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 ANKRD20A3Q5VUR7 823 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 MAEAQ7L5Y9 396 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 CABP7Q86V35 215 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 SPATS2Q86XZ4 545 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 CDC23Q9UJX2 597 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 NPATQ14207 1427 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 FLOT1O75955 427 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 BAG2O95816 211 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 GUCY2DQ02846 1103 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 HERC4Q5GLZ8 1057 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 U2AF1L4Q8WU68 220 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 RAB17Q9H0T7 212 aa11.29□□□□□ -0.6
GTF3C1-202ENST00000561623 ABCB4P21439 1286 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 ZNF608Q9ULD9 1512 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 H7C1D1 291 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 CASP14P31944 242 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 CEP128Q6ZU80 1094 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 EPSTI1Q96J88 318 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 PARD6BQ9BYG5 372 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 LRWD1Q9UFC0 647 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 JRKLQ9Y4A0 524 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 I3L4J1 428 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 CHL1O00533 1208 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 MRPS9P82933 396 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 GEN1Q17RS7 908 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 ANKRD13CQ8N6S4 541 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 RILPQ96NA2 401 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 ARHGAP44Q17R89 818 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 DPCR1Q3MIW9 517 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 ADCK5Q3MIX3 580 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 BTG4Q9NY30 223 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 USH1CQ9Y6N9 552 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 ABCC4O15439 1325 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 DZIP3Q86Y13 1208 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 GSDMBQ8TAX9 411 aa11.28□□□□□ -0.6
GTF3C1-202ENST00000561623 ITIH3Q06033 890 aa11.27□□□□□ -0.6
GTF3C1-202ENST00000561623 BRDTQ58F21 947 aaPredicted RBP11.27□□□□□ -0.6
GTF3C1-202ENST00000561623 NCAPH2Q6IBW4 605 aa11.27□□□□□ -0.6
GTF3C1-202ENST00000561623 NBPF3Q9H094 633 aa11.27□□□□□ -0.6
GTF3C1-202ENST00000561623 CCNL1Q9UK58 526 aaPredicted RBP11.27□□□□□ -0.6
GTF3C1-202ENST00000561623 WDR44Q5JSH3 913 aa11.27□□□□□ -0.6
GTF3C1-202ENST00000561623 CAPN12Q6ZSI9 719 aa11.27□□□□□ -0.6
GTF3C1-202ENST00000561623 CCDC13Q8IYE1 715 aa11.27□□□□□ -0.6
GTF3C1-202ENST00000561623 NUF2Q9BZD4 464 aa11.27□□□□□ -0.6
GTF3C1-202ENST00000561623 AMFRQ9UKV5 643 aa11.27□□□□□ -0.6
GTF3C1-202ENST00000561623 SSH2Q76I76 1423 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 CMA1P23946 247 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 EEF2KMTQ96G04 330 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 GRIN2AQ12879 1464 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 STX10O60499 249 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 TERF2Q15554 542 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 RASEFQ8IZ41 740 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms