RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 NOM1Q5C9Z4 860 aaKnown RBP12.01□□□□□ -0.49
HERC1-212ENST00000561348 RUFY2Q8WXA3 655 aa12.01□□□□□ -0.49
HERC1-212ENST00000561348 GOPCQ9HD26 462 aa12.01□□□□□ -0.49
HERC1-212ENST00000561348 SLC45A1Q9Y2W3 748 aa12.01□□□□□ -0.49
HERC1-212ENST00000561348 ZSWIM8A7E2V4 1837 aa12□□□□□ -0.49
HERC1-212ENST00000561348 ZNF213O14771 459 aa12□□□□□ -0.49
HERC1-212ENST00000561348 SLC4A3P48751 1232 aa12□□□□□ -0.49
HERC1-212ENST00000561348 HERVK_113P62684 666 aa12□□□□□ -0.49
HERC1-212ENST00000561348 CAP1Q01518 475 aa12□□□□□ -0.49
HERC1-212ENST00000561348 PLS1Q14651 629 aa12□□□□□ -0.49
HERC1-212ENST00000561348 PKN2Q16513 984 aaKnown RBP12□□□□□ -0.49
HERC1-212ENST00000561348 IFFO2Q5TF58 517 aa12□□□□□ -0.49
HERC1-212ENST00000561348 FBXO46Q6PJ61 603 aaPredicted RBP12□□□□□ -0.49
HERC1-212ENST00000561348 LRRC47Q8N1G4 583 aaKnown RBP12□□□□□ -0.49
HERC1-212ENST00000561348 TRIM47Q96LD4 638 aa12□□□□□ -0.49
HERC1-212ENST00000561348 BIN2Q9UBW5 565 aaPredicted RBP12□□□□□ -0.49
HERC1-212ENST00000561348 STX8Q9UNK0 236 aa12□□□□□ -0.49
HERC1-212ENST00000561348 HPS5Q9UPZ3 1129 aa12□□□□□ -0.49
HERC1-212ENST00000561348 ABCB7O75027 752 aa11.99□□□□□ -0.49
HERC1-212ENST00000561348 FLOT1O75955 427 aa11.99□□□□□ -0.49
HERC1-212ENST00000561348 BCRP11274 1271 aa11.99□□□□□ -0.49
HERC1-212ENST00000561348 CHMLP26374 656 aa11.99□□□□□ -0.49
HERC1-212ENST00000561348 HOXD10P28358 340 aa11.99□□□□□ -0.49
HERC1-212ENST00000561348 GCLCP48506 637 aaPredicted RBP11.99□□□□□ -0.49
HERC1-212ENST00000561348 KIAA1755Q5JYT7 1200 aa11.99□□□□□ -0.49
HERC1-212ENST00000561348 MFSD6Q6ZSS7 791 aa11.99□□□□□ -0.49
HERC1-212ENST00000561348 RAET1EQ8TD07 263 aa11.99□□□□□ -0.49
HERC1-212ENST00000561348 CEP95Q96GE4 821 aa11.99□□□□□ -0.49
HERC1-212ENST00000561348 NUP88Q99567 741 aaPredicted RBP11.99□□□□□ -0.49
HERC1-212ENST00000561348 VCPKMTQ9H867 229 aa11.99□□□□□ -0.49
HERC1-212ENST00000561348 PTPN22Q9Y2R2 807 aa11.99□□□□□ -0.49
HERC1-212ENST00000561348 TMX2Q9Y320 296 aa11.99□□□□□ -0.49
HERC1-212ENST00000561348 PTCH2Q9Y6C5 1203 aa11.99□□□□□ -0.49
HERC1-212ENST00000561348 LOC285556D6RIA3 1793 aa11.99□□□□□ -0.49
HERC1-212ENST00000561348 ROBO3Q96MS0 1386 aa11.98□□□□□ -0.49
HERC1-212ENST00000561348 MYPNQ86TC9 1320 aa11.98□□□□□ -0.49
HERC1-212ENST00000561348 ADGRA2Q96PE1 1338 aa11.98□□□□□ -0.49
HERC1-212ENST00000561348 NMT2O60551 498 aa11.98□□□□□ -0.49
HERC1-212ENST00000561348 CTGFP29279 349 aa11.98□□□□□ -0.49
HERC1-212ENST00000561348 HOXA7P31268 230 aaPredicted RBP11.98□□□□□ -0.49
HERC1-212ENST00000561348 SOX10P56693 466 aa11.98□□□□□ -0.49
HERC1-212ENST00000561348 IKQ13123 557 aaPredicted RBP11.98□□□□□ -0.49
HERC1-212ENST00000561348 ALX1Q15699 326 aa11.98□□□□□ -0.49
HERC1-212ENST00000561348 IMMTQ16891 758 aaKnown RBP11.98□□□□□ -0.49
HERC1-212ENST00000561348 SLC9C1Q4G0N8 1177 aa11.98□□□□□ -0.49
HERC1-212ENST00000561348 FAM83BQ5T0W9 1011 aa11.98□□□□□ -0.49
HERC1-212ENST00000561348 CATSPERGQ6ZRH7 1159 aa11.98□□□□□ -0.49
HERC1-212ENST00000561348 KIAA1211Q6ZU35 1233 aa11.98□□□□□ -0.49
HERC1-212ENST00000561348 TICAM2Q86XR7 235 aa11.98□□□□□ -0.49
HERC1-212ENST00000561348 SIAH1Q8IUQ4 282 aa11.98□□□□□ -0.49
HERC1-212ENST00000561348 GPRC5AQ8NFJ5 357 aa11.98□□□□□ -0.49
HERC1-212ENST00000561348 SH3TC2Q8TF17 1288 aa11.98□□□□□ -0.49
HERC1-212ENST00000561348 COA7Q96BR5 231 aa11.98□□□□□ -0.49
HERC1-212ENST00000561348 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.98□□□□□ -0.49
HERC1-212ENST00000561348 IL25Q9H293 177 aa11.98□□□□□ -0.49
HERC1-212ENST00000561348 CTDP1Q9Y5B0 961 aaPredicted RBP11.98□□□□□ -0.49
HERC1-212ENST00000561348 F5H6K3 240 aa11.97□□□□□ -0.49
HERC1-212ENST00000561348 TTLL1O95922 423 aa11.97□□□□□ -0.49
HERC1-212ENST00000561348 PRKCZQ05513 592 aa11.97□□□□□ -0.49
HERC1-212ENST00000561348 KLRC3Q07444 240 aa11.97□□□□□ -0.49
HERC1-212ENST00000561348 COG2Q14746 738 aa11.97□□□□□ -0.49
HERC1-212ENST00000561348 FAM110CQ1W6H9 321 aa11.97□□□□□ -0.49
HERC1-212ENST00000561348 AKNAD1Q5T1N1 836 aa11.97□□□□□ -0.49
HERC1-212ENST00000561348 TBC1D10CQ8IV04 446 aa11.97□□□□□ -0.49
HERC1-212ENST00000561348 NEDD1Q8NHV4 660 aa11.97□□□□□ -0.49
HERC1-212ENST00000561348 C12orf42Q96LP6 360 aa11.97□□□□□ -0.49
HERC1-212ENST00000561348 ZKSCAN3Q9BRR0 538 aa11.97□□□□□ -0.49
HERC1-212ENST00000561348 TXNRD2Q9NNW7 524 aa11.97□□□□□ -0.49
HERC1-212ENST00000561348 FBXO28Q9NVF7 368 aa11.97□□□□□ -0.49
HERC1-212ENST00000561348 PPP4R2Q9NY27 417 aa11.97□□□□□ -0.49
HERC1-212ENST00000561348 CTNNA3Q9UI47 895 aa11.97□□□□□ -0.49
HERC1-212ENST00000561348 GABRQQ9UN88 632 aa11.97□□□□□ -0.49
HERC1-212ENST00000561348 ERVK-9P63128 1117 aa11.96□□□□□ -0.49
HERC1-212ENST00000561348 ERVK-24P63145 666 aa11.96□□□□□ -0.49
HERC1-212ENST00000561348 PTH1RQ03431 593 aa11.96□□□□□ -0.49
HERC1-212ENST00000561348 Q3C1V9 767 aa11.96□□□□□ -0.49
HERC1-212ENST00000561348 LPAR1Q92633 364 aa11.96□□□□□ -0.49
HERC1-212ENST00000561348 DSCC1Q9BVC3 393 aa11.96□□□□□ -0.49
HERC1-212ENST00000561348 RNF41Q9H4P4 317 aaPredicted RBP11.96□□□□□ -0.49
HERC1-212ENST00000561348 MTMR4Q9NYA4 1195 aa11.96□□□□□ -0.49
HERC1-212ENST00000561348 HOXC10Q9NYD6 342 aa11.96□□□□□ -0.49
HERC1-212ENST00000561348 NYAP2Q9P242 653 aa11.96□□□□□ -0.49
HERC1-212ENST00000561348 RBPJLQ9UBG7 517 aa11.96□□□□□ -0.49
HERC1-212ENST00000561348 SRRDQ9UH36 339 aa11.96□□□□□ -0.49
HERC1-212ENST00000561348 ANAPC4Q9UJX5 808 aa11.96□□□□□ -0.49
HERC1-212ENST00000561348 TACC3Q9Y6A5 838 aa11.96□□□□□ -0.49
HERC1-212ENST00000561348 MYH4Q9Y623 1939 aa11.96□□□□□ -0.5
HERC1-212ENST00000561348 NEDD4P46934 1319 aa11.95□□□□□ -0.5
HERC1-212ENST00000561348 B4E1Z4 1266 aa11.95□□□□□ -0.5
HERC1-212ENST00000561348 WDR46O15213 610 aaKnown RBP11.95□□□□□ -0.5
HERC1-212ENST00000561348 NDUFB10O96000 172 aa11.95□□□□□ -0.5
HERC1-212ENST00000561348 CYP2B6P20813 491 aa11.95□□□□□ -0.5
HERC1-212ENST00000561348 FLT3LGP49771 235 aa11.95□□□□□ -0.5
HERC1-212ENST00000561348 CCDC96Q2M329 555 aa11.95□□□□□ -0.5
HERC1-212ENST00000561348 SLFN13Q68D06 897 aa11.95□□□□□ -0.5
HERC1-212ENST00000561348 CASC1Q6TDU7 716 aa11.95□□□□□ -0.5
HERC1-212ENST00000561348 NBPF11Q86T75 865 aa11.95□□□□□ -0.5
HERC1-212ENST00000561348 ESR2Q92731 530 aa11.95□□□□□ -0.5
HERC1-212ENST00000561348 KIFC2Q96AC6 838 aa11.95□□□□□ -0.5
HERC1-212ENST00000561348 ATG4CQ96DT6 458 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms