RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 C22orf23Q9BZE7 217 aa12.1□□□□□ -0.47
LRRC28-221ENST00000561276 UPF2Q9HAU5 1272 aaKnown RBP12.1□□□□□ -0.47
LRRC28-221ENST00000561276 TMX2Q9Y320 296 aa12.1□□□□□ -0.47
LRRC28-221ENST00000561276 CCL15-CCL14A0A0B4J2E2 113 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 A0A0G2JLL6 359 aaPredicted RBP12.09□□□□□ -0.47
LRRC28-221ENST00000561276 MANSC4A6NHS7 340 aaPredicted RBP12.09□□□□□ -0.47
LRRC28-221ENST00000561276 IFIT3O14879 490 aaKnown RBP12.09□□□□□ -0.47
LRRC28-221ENST00000561276 PRC1O43663 620 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 CPA1P15085 419 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 MAP2K2P36507 400 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 TM4SF4P48230 202 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 USP14P54578 494 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 ANTXR2P58335 489 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 ANAPC15P60006 121 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 DGKZQ13574 1117 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 CCL15Q16663 113 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 SH3D19Q5HYK7 790 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 BLOC1S2Q6QNY1 142 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 USP17L2Q6R6M4 530 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 DHX32Q7L7V1 743 aaKnown RBP12.09□□□□□ -0.47
LRRC28-221ENST00000561276 FASTKD5Q7L8L6 764 aaKnown RBP12.09□□□□□ -0.47
LRRC28-221ENST00000561276 PRRT2Q7Z6L0 340 aaPredicted RBP12.09□□□□□ -0.47
LRRC28-221ENST00000561276 IGDCC4Q8TDY8 1250 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 ANKS1AQ92625 1134 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 FEZ1Q99689 392 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 KIAA1683Q9H0B3 1180 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 SH2D4AQ9H788 454 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 EMILIN3Q9NT22 766 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 TNKSO95271 1327 aa12.09□□□□□ -0.47
LRRC28-221ENST00000561276 LOC285556D6RIA3 1793 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 ERICH2A1L162 156 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 TESPA1A2RU30 521 aaPredicted RBP12.08□□□□□ -0.48
LRRC28-221ENST00000561276 F5H6K3 240 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 RAD21O60216 631 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 CASTP20810 708 aaKnown RBP12.08□□□□□ -0.48
LRRC28-221ENST00000561276 KLRC3Q07444 240 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 SART3Q15020 963 aaKnown RBP12.08□□□□□ -0.48
LRRC28-221ENST00000561276 SEC23AQ15436 765 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 KIAA1755Q5JYT7 1200 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 GADL1Q6ZQY3 521 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 RUFY3Q7L099 469 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 ENAHQ8N8S7 591 aaPredicted RBP12.08□□□□□ -0.48
LRRC28-221ENST00000561276 TMEM87BQ96K49 555 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 TCEANC2Q96MN5 208 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 PTPN18Q99952 460 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 TMEM47Q9BQJ4 181 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 MTA3Q9BTC8 594 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 TM6SF1Q9BZW5 370 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 VCPKMTQ9H867 229 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 ZSWIM6Q9HCJ5 1215 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 TMOD4Q9NZQ9 345 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 CYP46A1Q9Y6A2 500 aa12.08□□□□□ -0.48
LRRC28-221ENST00000561276 TOP1P11387 765 aaKnown RBP12.07□□□□□ -0.48
LRRC28-221ENST00000561276 PRKAR2AP13861 404 aaKnown RBP12.07□□□□□ -0.48
LRRC28-221ENST00000561276 RBM25P49756 843 aaKnown RBP12.07□□□□□ -0.48
LRRC28-221ENST00000561276 SREBF2Q12772 1141 aa12.07□□□□□ -0.48
LRRC28-221ENST00000561276 MOGSQ13724 837 aa12.07□□□□□ -0.48
LRRC28-221ENST00000561276 WTAPQ15007 396 aa12.07□□□□□ -0.48
LRRC28-221ENST00000561276 TMEM67Q5HYA8 995 aa12.07□□□□□ -0.48
LRRC28-221ENST00000561276 IFIT1BQ5T764 474 aaKnown RBP12.07□□□□□ -0.48
LRRC28-221ENST00000561276 SPICE1Q8N0Z3 855 aa12.07□□□□□ -0.48
LRRC28-221ENST00000561276 LRRC47Q8N1G4 583 aaKnown RBP12.07□□□□□ -0.48
LRRC28-221ENST00000561276 PROCA1Q8NCQ7 364 aaPredicted RBP12.07□□□□□ -0.48
LRRC28-221ENST00000561276 BRI3BPQ8WY22 251 aa12.07□□□□□ -0.48
LRRC28-221ENST00000561276 IL17RAQ96F46 866 aa12.07□□□□□ -0.48
LRRC28-221ENST00000561276 LRRC2Q9BYS8 371 aa12.07□□□□□ -0.48
LRRC28-221ENST00000561276 KAT14Q9H8E8 782 aa12.07□□□□□ -0.48
LRRC28-221ENST00000561276 SENP2Q9HC62 589 aa12.07□□□□□ -0.48
LRRC28-221ENST00000561276 GOPCQ9HD26 462 aa12.07□□□□□ -0.48
LRRC28-221ENST00000561276 GPHNQ9NQX3 736 aaPredicted RBP12.07□□□□□ -0.48
LRRC28-221ENST00000561276 WDR19Q8NEZ3 1342 aa12.07□□□□□ -0.48
LRRC28-221ENST00000561276 BTBD19C9JJ37 291 aa12.06□□□□□ -0.48
LRRC28-221ENST00000561276 RPS6KB1P23443 525 aa12.06□□□□□ -0.48
LRRC28-221ENST00000561276 TREML2Q5T2D2 321 aa12.06□□□□□ -0.48
LRRC28-221ENST00000561276 GPAT2Q6NUI2 795 aa12.06□□□□□ -0.48
LRRC28-221ENST00000561276 Q6ZUG5 572 aa12.06□□□□□ -0.48
LRRC28-221ENST00000561276 IFNL1Q8IU54 200 aa12.06□□□□□ -0.48
LRRC28-221ENST00000561276 TMTC2Q8N394 836 aa12.06□□□□□ -0.48
LRRC28-221ENST00000561276 GMCL1P1Q8NEA9 526 aa12.06□□□□□ -0.48
LRRC28-221ENST00000561276 LPAR1Q92633 364 aa12.06□□□□□ -0.48
LRRC28-221ENST00000561276 CHMP4CQ96CF2 233 aa12.06□□□□□ -0.48
LRRC28-221ENST00000561276 C12orf42Q96LP6 360 aa12.06□□□□□ -0.48
LRRC28-221ENST00000561276 UPF3BQ9BZI7 483 aaKnown RBP12.06□□□□□ -0.48
LRRC28-221ENST00000561276 SYNPO2Q9UMS6 1093 aa12.06□□□□□ -0.48
LRRC28-221ENST00000561276 MTMR7Q9Y216 660 aa12.06□□□□□ -0.48
LRRC28-221ENST00000561276 PARP14Q460N5 1801 aa12.05□□□□□ -0.48
LRRC28-221ENST00000561276 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
LRRC28-221ENST00000561276 PDHXO00330 501 aa12.05□□□□□ -0.48
LRRC28-221ENST00000561276 IGF2BP3O00425 579 aaKnown RBP eCLIP12.05□□□□□ -0.48
LRRC28-221ENST00000561276 LIFRP42702 1097 aa12.05□□□□□ -0.48
LRRC28-221ENST00000561276 FGD1P98174 961 aa12.05□□□□□ -0.48
LRRC28-221ENST00000561276 SLFN13Q68D06 897 aa12.05□□□□□ -0.48
LRRC28-221ENST00000561276 OTUD7BQ6GQQ9 843 aa12.05□□□□□ -0.48
LRRC28-221ENST00000561276 ANKRD23Q86SG2 305 aa12.05□□□□□ -0.48
LRRC28-221ENST00000561276 FAM43AQ8N2R8 423 aa12.05□□□□□ -0.48
LRRC28-221ENST00000561276 PNMA1Q8ND90 353 aa12.05□□□□□ -0.48
LRRC28-221ENST00000561276 KIF2CQ99661 725 aa12.05□□□□□ -0.48
LRRC28-221ENST00000561276 LY9Q9HBG7 655 aa12.05□□□□□ -0.48
LRRC28-221ENST00000561276 AGTPBP1Q9UPW5 1226 aa12.05□□□□□ -0.48
LRRC28-221ENST00000561276 THSD7BQ9C0I4 1608 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms