RNA–Protein interactions for RNA: ENST00000561169.5

KNSTRN-213, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-213ENST00000561169 PABPC4Q13310 644 aaKnown RBP eCLIP20.28■□□□□ 0.84
KNSTRN-213ENST00000561169 ANKRD13CQ8N6S4 541 aa20.28■□□□□ 0.84
KNSTRN-213ENST00000561169 RUFY2Q8WXA3 655 aa20.28■□□□□ 0.84
KNSTRN-213ENST00000561169 TXNRD2Q9NNW7 524 aa20.28■□□□□ 0.84
KNSTRN-213ENST00000561169 MTMR4Q9NYA4 1195 aa20.28■□□□□ 0.84
KNSTRN-213ENST00000561169 NYAP2Q9P242 653 aa20.28■□□□□ 0.84
KNSTRN-213ENST00000561169 RANBP6O60518 1105 aaKnown RBP20.27■□□□□ 0.84
KNSTRN-213ENST00000561169 TSPY3P0CV98 308 aa20.27■□□□□ 0.84
KNSTRN-213ENST00000561169 TSPY8P0CW00 308 aa20.27■□□□□ 0.84
KNSTRN-213ENST00000561169 OSBPP22059 807 aa20.27■□□□□ 0.84
KNSTRN-213ENST00000561169 RRP12Q5JTH9 1297 aaKnown RBP20.27■□□□□ 0.84
KNSTRN-213ENST00000561169 AKNAD1Q5T1N1 836 aa20.27■□□□□ 0.84
KNSTRN-213ENST00000561169 CATSPERGQ6ZRH7 1159 aa20.27■□□□□ 0.84
KNSTRN-213ENST00000561169 STAG1Q8WVM7 1258 aa20.27■□□□□ 0.84
KNSTRN-213ENST00000561169 TRIM47Q96LD4 638 aa20.27■□□□□ 0.84
KNSTRN-213ENST00000561169 ESYT1Q9BSJ8 1104 aa20.27■□□□□ 0.84
KNSTRN-213ENST00000561169 IL17RBQ9NRM6 502 aa20.27■□□□□ 0.84
KNSTRN-213ENST00000561169 TRIM17Q9Y577 477 aa20.27■□□□□ 0.84
KNSTRN-213ENST00000561169 TAF6LQ9Y6J9 622 aa20.27■□□□□ 0.84
KNSTRN-213ENST00000561169 USP17L15C9J2P7 530 aa20.26■□□□□ 0.83
KNSTRN-213ENST00000561169 USP17L13C9JLJ4 530 aa20.26■□□□□ 0.83
KNSTRN-213ENST00000561169 USP17L11C9JVI0 530 aa20.26■□□□□ 0.83
KNSTRN-213ENST00000561169 USP17L18D6R9N7 530 aa20.26■□□□□ 0.83
KNSTRN-213ENST00000561169 USP17L22D6RA61 530 aa20.26■□□□□ 0.83
KNSTRN-213ENST00000561169 USP17L17D6RBQ6 530 aa20.26■□□□□ 0.83
KNSTRN-213ENST00000561169 USP17L19D6RCP7 530 aa20.26■□□□□ 0.83
KNSTRN-213ENST00000561169 USP17L20D6RJB6 530 aa20.26■□□□□ 0.83
KNSTRN-213ENST00000561169 USP17L24Q0WX57 530 aa20.26■□□□□ 0.83
KNSTRN-213ENST00000561169 LRRC47Q8N1G4 583 aaKnown RBP20.26■□□□□ 0.83
KNSTRN-213ENST00000561169 CLIP2Q9UDT6 1046 aa20.26■□□□□ 0.83
KNSTRN-213ENST00000561169 SMCHD1A6NHR9 2005 aa20.25■□□□□ 0.83
KNSTRN-213ENST00000561169 FAM110CQ1W6H9 321 aa20.25■□□□□ 0.83
KNSTRN-213ENST00000561169 NUP88Q99567 741 aaPredicted RBP20.25■□□□□ 0.83
KNSTRN-213ENST00000561169 SH2D4AQ9H788 454 aa20.25■□□□□ 0.83
KNSTRN-213ENST00000561169 EFCC1Q9HA90 598 aa20.25■□□□□ 0.83
KNSTRN-213ENST00000561169 TOMM22Q9NS69 142 aa20.25■□□□□ 0.83
KNSTRN-213ENST00000561169 TSPY2A6NKD2 308 aa20.24■□□□□ 0.83
KNSTRN-213ENST00000561169 SPDYE16A6NNV3 312 aaPredicted RBP20.24■□□□□ 0.83
KNSTRN-213ENST00000561169 CNMDO75829 334 aa20.24■□□□□ 0.83
KNSTRN-213ENST00000561169 NDUFB10O96000 172 aa20.24■□□□□ 0.83
KNSTRN-213ENST00000561169 PSMC4P43686 418 aa20.24■□□□□ 0.83
KNSTRN-213ENST00000561169 GCLCP48506 637 aaPredicted RBP20.24■□□□□ 0.83
KNSTRN-213ENST00000561169 LPAR1Q92633 364 aa20.24■□□□□ 0.83
KNSTRN-213ENST00000561169 TANGO6Q9C0B7 1094 aa20.24■□□□□ 0.83
KNSTRN-213ENST00000561169 RBPJLQ9UBG7 517 aa20.24■□□□□ 0.83
KNSTRN-213ENST00000561169 MORF4L1Q9UBU8 362 aa20.24■□□□□ 0.83
KNSTRN-213ENST00000561169 ZNF213O14771 459 aa20.23■□□□□ 0.83
KNSTRN-213ENST00000561169 TTLL1O95922 423 aa20.23■□□□□ 0.83
KNSTRN-213ENST00000561169 MFSD6Q6ZSS7 791 aa20.23■□□□□ 0.83
KNSTRN-213ENST00000561169 RASGRP2Q7LDG7 609 aa20.23■□□□□ 0.83
KNSTRN-213ENST00000561169 MKL1Q969V6 931 aa20.23■□□□□ 0.83
KNSTRN-213ENST00000561169 ABHD8Q96I13 439 aa20.23■□□□□ 0.83
KNSTRN-213ENST00000561169 LSG1Q9H089 658 aaKnown RBP20.23■□□□□ 0.83
KNSTRN-213ENST00000561169 FBXO28Q9NVF7 368 aa20.23■□□□□ 0.83
KNSTRN-213ENST00000561169 ZNFX1Q9P2E3 1918 aaKnown RBP20.23■□□□□ 0.83
KNSTRN-213ENST00000561169 WDR46O15213 610 aaKnown RBP20.22■□□□□ 0.83
KNSTRN-213ENST00000561169 NOVP48745 357 aa20.22■□□□□ 0.83
KNSTRN-213ENST00000561169 FAM83BQ5T0W9 1011 aa20.22■□□□□ 0.83
KNSTRN-213ENST00000561169 PAGR1Q9BTK6 254 aa20.22■□□□□ 0.83
KNSTRN-213ENST00000561169 GOPCQ9HD26 462 aa20.22■□□□□ 0.83
KNSTRN-213ENST00000561169 CTNNA3Q9UI47 895 aa20.22■□□□□ 0.83
KNSTRN-213ENST00000561169 F5H6K3 240 aa20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 RAD21O60216 631 aa20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 CDC45O75419 566 aa20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 CYP21A2P08686 494 aa20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 KLRC3Q07444 240 aa20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 IMMTQ16891 758 aaKnown RBP20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 Q3C1V9 767 aa20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 MAP4K1Q92918 833 aa20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 BTBD7Q9P203 1132 aa20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 B4E1Z4 1266 aa20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 PCP11498 1178 aaKnown RBP20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 KIF22Q14807 665 aa20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 RCSD1Q6JBY9 416 aa20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 FBXO46Q6PJ61 603 aaPredicted RBP20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 LBX2Q6XYB7 198 aa20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 CHMP4CQ96CF2 233 aa20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 ATG4CQ96DT6 458 aa20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 RNF41Q9H4P4 317 aaPredicted RBP20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 HPS5Q9UPZ3 1129 aa20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 PTPN22Q9Y2R2 807 aa20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 RBM8AQ9Y5S9 174 aaKnown RBP20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 PTCH2Q9Y6C5 1203 aa20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 U3KPZ7 1027 aaPredicted RBP20.21■□□□□ 0.83
KNSTRN-213ENST00000561169 KDM4AO75164 1064 aa20.2■□□□□ 0.82
KNSTRN-213ENST00000561169 FLOT1O75955 427 aa20.2■□□□□ 0.82
KNSTRN-213ENST00000561169 ERVK-9P63128 1117 aa20.2■□□□□ 0.82
KNSTRN-213ENST00000561169 ERVK-24P63145 666 aa20.2■□□□□ 0.82
KNSTRN-213ENST00000561169 PKN2Q16513 984 aaKnown RBP20.2■□□□□ 0.82
KNSTRN-213ENST00000561169 STOX1Q6ZVD7 989 aa20.2■□□□□ 0.82
KNSTRN-213ENST00000561169 GMCL1P1Q8NEA9 526 aa20.2■□□□□ 0.82
KNSTRN-213ENST00000561169 PORCNQ9H237 461 aa20.2■□□□□ 0.82
KNSTRN-213ENST00000561169 STX8Q9UNK0 236 aa20.2■□□□□ 0.82
KNSTRN-213ENST00000561169 FMNL1O95466 1100 aaPredicted RBP20.19■□□□□ 0.82
KNSTRN-213ENST00000561169 DSG3P32926 999 aa20.19■□□□□ 0.82
KNSTRN-213ENST00000561169 FCGRTP55899 365 aa20.19■□□□□ 0.82
KNSTRN-213ENST00000561169 COG2Q14746 738 aa20.19■□□□□ 0.82
KNSTRN-213ENST00000561169 SAMD1Q6SPF0 538 aaPredicted RBP20.19■□□□□ 0.82
KNSTRN-213ENST00000561169 ZKSCAN3Q9BRR0 538 aa20.19■□□□□ 0.82
KNSTRN-213ENST00000561169 TCP11L1Q9NUJ3 509 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms