RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 ARIH1Q9Y4X5 557 aaPredicted RBP7.95□□□□□ -1.14
USP8-213ENST00000560885 PCDHB3Q9Y5E6 796 aa7.95□□□□□ -1.14
USP8-213ENST00000560885 FAM196BA6NMK8 535 aa7.94□□□□□ -1.14
USP8-213ENST00000560885 E9PSI1 815 aa7.94□□□□□ -1.14
USP8-213ENST00000560885 COL6A1P12109 1028 aa7.94□□□□□ -1.14
USP8-213ENST00000560885 HOXA7P31268 230 aaPredicted RBP7.94□□□□□ -1.14
USP8-213ENST00000560885 MVPQ14764 893 aaKnown RBP7.94□□□□□ -1.14
USP8-213ENST00000560885 SWT1Q5T5J6 900 aaKnown RBP7.94□□□□□ -1.14
USP8-213ENST00000560885 FAM9BQ8IZU0 186 aa7.94□□□□□ -1.14
USP8-213ENST00000560885 TTC13Q8NBP0 860 aa7.94□□□□□ -1.14
USP8-213ENST00000560885 ZNF384Q8TF68 577 aa7.94□□□□□ -1.14
USP8-213ENST00000560885 SOCS4Q8WXH5 440 aa7.94□□□□□ -1.14
USP8-213ENST00000560885 NUDT12Q9BQG2 462 aa7.94□□□□□ -1.14
USP8-213ENST00000560885 WDR18Q9BV38 432 aa7.94□□□□□ -1.14
USP8-213ENST00000560885 PFASO15067 1338 aa7.94□□□□□ -1.14
USP8-213ENST00000560885 MYO5AQ9Y4I1 1855 aaKnown RBP7.94□□□□□ -1.14
USP8-213ENST00000560885 MYH1P12882 1939 aa7.93□□□□□ -1.14
USP8-213ENST00000560885 CDH23Q9H251 3354 aa7.93□□□□□ -1.14
USP8-213ENST00000560885 A0A1B0GUL7 405 aa7.93□□□□□ -1.14
USP8-213ENST00000560885 FAM187AA6NFU0 413 aa7.93□□□□□ -1.14
USP8-213ENST00000560885 C19orf81C9J6K1 198 aa7.93□□□□□ -1.14
USP8-213ENST00000560885 ASNSP08243 561 aa7.93□□□□□ -1.14
USP8-213ENST00000560885 CYP2B6P20813 491 aa7.93□□□□□ -1.14
USP8-213ENST00000560885 MAPK4P31152 587 aa7.93□□□□□ -1.14
USP8-213ENST00000560885 BACE1P56817 501 aa7.93□□□□□ -1.14
USP8-213ENST00000560885 HERVK_113P62684 666 aa7.93□□□□□ -1.14
USP8-213ENST00000560885 IRX3P78415 501 aaPredicted RBP7.93□□□□□ -1.14
USP8-213ENST00000560885 CACNB2Q08289 660 aaPredicted RBP7.93□□□□□ -1.14
USP8-213ENST00000560885 PDE3AQ14432 1141 aa7.93□□□□□ -1.14
USP8-213ENST00000560885 FAM109BQ6ICB4 259 aaPredicted RBP7.93□□□□□ -1.14
USP8-213ENST00000560885 GPRC5AQ8NFJ5 357 aa7.93□□□□□ -1.14
USP8-213ENST00000560885 EMID1Q96A84 441 aaPredicted RBP7.93□□□□□ -1.14
USP8-213ENST00000560885 NSUN4Q96CB9 384 aaKnown RBP7.93□□□□□ -1.14
USP8-213ENST00000560885 XAGE2Q96GT9 111 aa7.93□□□□□ -1.14
USP8-213ENST00000560885 DHX36Q9H2U1 1008 aaKnown RBP7.93□□□□□ -1.14
USP8-213ENST00000560885 TMOD4Q9NZQ9 345 aa7.93□□□□□ -1.14
USP8-213ENST00000560885 PI4KBQ9UBF8 816 aa7.93□□□□□ -1.14
USP8-213ENST00000560885 PA2G4Q9UQ80 394 aaKnown RBP7.93□□□□□ -1.14
USP8-213ENST00000560885 LTBP2Q14767 1821 aa7.93□□□□□ -1.14
USP8-213ENST00000560885 RLFQ13129 1914 aa7.92□□□□□ -1.14
USP8-213ENST00000560885 ZKSCAN1P17029 563 aaPredicted RBP7.92□□□□□ -1.14
USP8-213ENST00000560885 MTMR2Q13614 643 aa7.92□□□□□ -1.14
USP8-213ENST00000560885 RRP1BQ14684 758 aaKnown RBP7.92□□□□□ -1.14
USP8-213ENST00000560885 ZNF697Q5TEC3 545 aa7.92□□□□□ -1.14
USP8-213ENST00000560885 METTL16Q86W50 562 aaKnown RBP7.92□□□□□ -1.14
USP8-213ENST00000560885 CCAR1Q8IX12 1150 aaKnown RBP7.92□□□□□ -1.14
USP8-213ENST00000560885 SPATA5Q8NB90 893 aa7.92□□□□□ -1.14
USP8-213ENST00000560885 GTF3C2Q8WUA4 911 aaPredicted RBP7.92□□□□□ -1.14
USP8-213ENST00000560885 USP6NLQ92738 828 aa7.92□□□□□ -1.14
USP8-213ENST00000560885 P2RX7Q99572 595 aaKnown RBP7.92□□□□□ -1.14
USP8-213ENST00000560885 NOL10Q9BSC4 688 aaKnown RBP7.92□□□□□ -1.14
USP8-213ENST00000560885 COL25A1Q9BXS0 654 aaPredicted RBP7.92□□□□□ -1.14
USP8-213ENST00000560885 SMC4Q9NTJ3 1288 aa7.92□□□□□ -1.14
USP8-213ENST00000560885 GINM1Q9NU53 330 aa7.92□□□□□ -1.14
USP8-213ENST00000560885 HMG20BQ9P0W2 317 aa7.92□□□□□ -1.14
USP8-213ENST00000560885 RBPJLQ9UBG7 517 aa7.92□□□□□ -1.14
USP8-213ENST00000560885 MUC3AQ02505 3323 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 USP17L10C9JJH3 530 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 GDF9O60383 454 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 ARID4AP29374 1257 aaPredicted RBP7.91□□□□□ -1.14
USP8-213ENST00000560885 RGS2P41220 211 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 ERVK-9P63128 1117 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 ERVK-24P63145 666 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 SLFN5Q08AF3 891 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 TFCP2Q12800 502 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 MTX1Q13505 466 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 LRRC26Q2I0M4 334 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 MORN1Q5T089 497 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 GORABQ5T7V8 394 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 FOXP4Q8IVH2 680 aaPredicted RBP7.91□□□□□ -1.14
USP8-213ENST00000560885 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.91□□□□□ -1.14
USP8-213ENST00000560885 TEX11Q8IYF3 940 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 CRIPAKQ8N1N5 446 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 NEUROD6Q96NK8 337 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 APBA2Q99767 749 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 TXNRD2Q9NNW7 524 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 RAI14Q9P0K7 980 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 STK17AQ9UEE5 414 aa7.91□□□□□ -1.14
USP8-213ENST00000560885 ZNF236Q9UL36 1845 aa7.9□□□□□ -1.14
USP8-213ENST00000560885 SRGAP3O43295 1099 aa7.9□□□□□ -1.14
USP8-213ENST00000560885 IGSF3O75054 1194 aa7.9□□□□□ -1.14
USP8-213ENST00000560885 GLRX3O76003 335 aaKnown RBP7.9□□□□□ -1.14
USP8-213ENST00000560885 BAG3O95817 575 aa7.9□□□□□ -1.14
USP8-213ENST00000560885 GNAI3P08754 354 aa7.9□□□□□ -1.14
USP8-213ENST00000560885 CT47B1P0C2W7 299 aaPredicted RBP7.9□□□□□ -1.14
USP8-213ENST00000560885 CCND3P30281 292 aaPredicted RBP7.9□□□□□ -1.14
USP8-213ENST00000560885 MDM2Q00987 491 aaPredicted RBP7.9□□□□□ -1.14
USP8-213ENST00000560885 CCL14Q16627 93 aa7.9□□□□□ -1.14
USP8-213ENST00000560885 Q3C1V9 767 aa7.9□□□□□ -1.14
USP8-213ENST00000560885 PI16Q6UXB8 463 aa7.9□□□□□ -1.14
USP8-213ENST00000560885 TBC1D9Q6ZT07 1266 aa7.9□□□□□ -1.14
USP8-213ENST00000560885 GPR142Q7Z601 462 aa7.9□□□□□ -1.14
USP8-213ENST00000560885 PLEKHH3Q7Z736 793 aa7.9□□□□□ -1.14
USP8-213ENST00000560885 CRACR2BQ8N4Y2 399 aaPredicted RBP7.9□□□□□ -1.14
USP8-213ENST00000560885 SH3RF3Q8TEJ3 882 aaPredicted RBP7.9□□□□□ -1.14
USP8-213ENST00000560885 MEIS3Q99687 375 aa7.9□□□□□ -1.14
USP8-213ENST00000560885 LBHD1Q9BQE6 289 aaPredicted RBP7.9□□□□□ -1.14
USP8-213ENST00000560885 TRIM34Q9BYJ4 488 aa7.9□□□□□ -1.14
USP8-213ENST00000560885 API5Q9BZZ5 524 aaKnown RBP7.9□□□□□ -1.14
USP8-213ENST00000560885 PORCNQ9H237 461 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms