RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.34□□□□□ -1.4
ZEB1-219ENST00000560721 ZNF500O60304 480 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-219ENST00000560721 FMNL1O95466 1100 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-219ENST00000560721 TTLL1O95922 423 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 ICAM3P32942 547 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 PRPHP41219 470 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 HSD17B4P51659 736 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 ANTXR2P58335 489 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 TROAPQ12815 778 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 AP3B2Q13367 1082 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 OLFML2BQ68BL8 750 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 ERO1BQ86YB8 467 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 ANKRD13AQ8IZ07 590 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 TNFRSF25Q93038 417 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 AIDAQ96BJ3 306 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 ANGEL1Q9UNK9 670 aaKnown RBP6.33□□□□□ -1.4
ZEB1-219ENST00000560721 GOLIM4O00461 696 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 USP2O75604 605 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-219ENST00000560721 OFD1O75665 1012 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 TOMM70O94826 608 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 SLC25A27O95847 323 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 MAP3K9P80192 1104 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 ZSCAN23Q3MJ62 389 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 MAMDC4Q6UXC1 1216 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 SIAH1Q8IUQ4 282 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 OTUD7AQ8TE49 926 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-219ENST00000560721 SH3RF3Q8TEJ3 882 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-219ENST00000560721 ZFP91Q96JP5 570 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-219ENST00000560721 ZSCAN10Q96SZ4 725 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-219ENST00000560721 CCDC8Q9H0W5 538 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-219ENST00000560721 NOL7Q9UMY1 257 aaKnown RBP6.33□□□□□ -1.4
ZEB1-219ENST00000560721 TTF2Q9UNY4 1162 aaKnown RBP6.33□□□□□ -1.4
ZEB1-219ENST00000560721 KIF3AQ9Y496 699 aa6.33□□□□□ -1.4
ZEB1-219ENST00000560721 ZNF213O14771 459 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 MAFGO15525 162 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 RAD21O60216 631 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 EDNRBP24530 442 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 IREB2P48200 963 aaKnown RBP6.32□□□□□ -1.4
ZEB1-219ENST00000560721 CDK8P49336 464 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 HIRAP54198 1017 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-219ENST00000560721 TOB2Q14106 344 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-219ENST00000560721 C16orf71Q8IYS4 520 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-219ENST00000560721 CHST13Q8NET6 341 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 KLHDC4Q8TBB5 520 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 GTF3C6Q969F1 213 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 TRIM44Q96DX7 344 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-219ENST00000560721 NEK1Q96PY6 1258 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.32□□□□□ -1.4
ZEB1-219ENST00000560721 PCDH10Q9P2E7 1040 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 USP25Q9UHP3 1055 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 NFASCO94856 1347 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 PHLPP2Q6ZVD8 1323 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 MBD4O95243 580 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 U2AF2P26368 475 aaKnown RBP eCLIP6.32□□□□□ -1.47e-7■■■■■ 29.9
ZEB1-219ENST00000560721 PRDX5P30044 214 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 KCNQ4P56696 695 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 HYIQ5T013 277 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 ARMC9Q7Z3E5 817 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 ZNF589Q86UQ0 364 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-219ENST00000560721 ZNF579Q8NAF0 562 aaKnown RBP6.32□□□□□ -1.4
ZEB1-219ENST00000560721 GPT2Q8TD30 523 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 ZMYND15Q9H091 742 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 GOPCQ9HD26 462 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 LIMCH1Q9UPQ0 1083 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 HPS5Q9UPZ3 1129 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 ATF5Q9Y2D1 282 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-219ENST00000560721 SNCAIPQ9Y6H5 919 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 DDX49Q9Y6V7 483 aaKnown RBP6.32□□□□□ -1.4
ZEB1-219ENST00000560721 EMSYQ7Z589 1322 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 ST18O60284 1047 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 KIF5BP33176 963 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 ABCD1P33897 745 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 GTF2A2P52657 109 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 GTF2IP78347 998 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 SART3Q15020 963 aaKnown RBP6.32□□□□□ -1.4
ZEB1-219ENST00000560721 KIAA1211Q6ZU35 1233 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 MICALL2Q8IY33 904 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 TEX11Q8IYF3 940 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 DNAJC2Q99543 621 aaKnown RBP6.32□□□□□ -1.4
ZEB1-219ENST00000560721 PYM1Q9BRP8 204 aaKnown RBP6.32□□□□□ -1.4
ZEB1-219ENST00000560721 VCPKMTQ9H867 229 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 LRP2BPQ9P2M1 347 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 AGTPBP1Q9UPW5 1226 aa6.32□□□□□ -1.4
ZEB1-219ENST00000560721 TCHHQ07283 1943 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 DNAJC25-GNG10A0A024R161 153 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 USP17L5A8MUK1 530 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 HSP90AA1P07900 732 aaKnown RBP6.31□□□□□ -1.4
ZEB1-219ENST00000560721 XRCC5P13010 732 aaKnown RBP6.31□□□□□ -1.4
ZEB1-219ENST00000560721 PKP1Q13835 747 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 GORABQ5T7V8 394 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 VPS37DQ86XT2 251 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 DNERQ8NFT8 737 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 IWS1Q96ST2 819 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 FOXP1Q9H334 677 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-219ENST00000560721 DDX4Q9NQI0 724 aaKnown RBP6.31□□□□□ -1.4
ZEB1-219ENST00000560721 USP40Q9NVE5 1235 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 FBXO40Q9UH90 709 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 CYP46A1Q9Y6A2 500 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 TACC3Q9Y6A5 838 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 SYNGAP1Q96PV0 1343 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms