RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 TFCP2L1Q9NZI6 479 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 FAN1Q9Y2M0 1017 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 H7C1D1 291 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 SSH2Q76I76 1423 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 FAM71BQ8TC56 605 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 PRPF31Q8WWY3 499 aaKnown RBP14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 AZI2Q9H6S1 392 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 ATP8A2Q9NTI2 1148 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 TMEM63CQ9P1W3 806 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 GGA1Q9UJY5 639 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 TRPC6Q9Y210 931 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 PCDHB13Q9Y5F0 798 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 DUOX2Q9NRD8 1548 aa14.57□□□□□ -0.08
CSPG4P11-201ENST00000560634 XRCC5P13010 732 aaKnown RBP14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 MAP2K2P36507 400 aa14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 LONRF3Q496Y0 759 aa14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 NELFCDQ8IXH7 590 aa14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 GOLGA5Q8TBA6 731 aa14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 NLRC4Q9NPP4 1024 aa14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 SERTAD1Q9UHV2 236 aa14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 HGSO14964 777 aaPredicted RBP14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 SATB1Q01826 763 aa14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 TRIM6Q9C030 488 aaPredicted RBP14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 RBM6P78332 1123 aaKnown RBP14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 MROH5Q6ZUA9 1318 aa14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 TRIM37O94972 964 aa14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 POLD1P28340 1107 aa14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 GNGT1P63211 74 aa14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 PPP4R1Q8TF05 950 aa14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 GBP5Q96PP8 586 aa14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 RABEP2Q9H5N1 569 aa14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 JAG2Q9Y219 1238 aa14.56□□□□□ -0.08
CSPG4P11-201ENST00000560634 E7EWF7 191 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 N4BP1O75113 896 aaKnown RBP14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 ZBED4O75132 1171 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 ARHGAP4P98171 946 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 TRMT44Q8IYL2 757 aaKnown RBP14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 CCDC170Q8IYT3 715 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 MYOCDQ8IZQ8 938 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 TYW1Q9NV66 732 aaKnown RBP14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 PER1O15534 1290 aaPredicted RBP14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 JAK2O60674 1132 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 CTAGE3PQ8IX95 158 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 PALM2Q8IXS6 379 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 BBOF1Q8ND07 529 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 TBC1D22AQ8WUA7 517 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 KCNJ14Q9UNX9 436 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 YTHDC2Q9H6S0 1430 aaKnown RBP14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 A0A1W2PP64 1363 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 CMA1P23946 247 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 SLC8A1P32418 973 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 GCKRQ14397 625 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 GPHNQ9NQX3 736 aaPredicted RBP14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 MYO1AQ9UBC5 1043 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 NOD1Q9Y239 953 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 EIF2AK4Q9P2K8 1649 aaKnown RBP14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 PSDA5PKW4 1024 aaPredicted RBP14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 KCNJ18B7U540 433 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 KCNJ12Q14500 433 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 MIS12Q9H081 205 aa14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 METTL14Q9HCE5 456 aaKnown RBP14.55□□□□□ -0.08
CSPG4P11-201ENST00000560634 KRIT1O00522 736 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 MGEA5O60502 916 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 PFKFB1P16118 471 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 ADKP55263 362 aaKnown RBP14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 PPP2R5DQ14738 602 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 SPATA5Q8NB90 893 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 GSDMBQ8TAX9 411 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 U2AF1L4Q8WU68 220 aaKnown RBP14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 RABGAP1Q9Y3P9 1069 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 MYCLP12524 364 aaPredicted RBP14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 RPS6KA2Q15349 733 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 MICAL1Q8TDZ2 1067 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 RSAD2Q8WXG1 361 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 HAUS1Q96CS2 278 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 ARMCX3Q9UH62 379 aaPredicted RBP14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 TTC36A6NLP5 189 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 ARHGAP44Q17R89 818 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 OTUD6AQ7L8S5 288 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 NOSTRINQ8IVI9 506 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 ANKRD42Q8N9B4 389 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 TSC1Q92574 1164 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 Q9H521 79 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 ABCC1P33527 1531 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 ZNF532Q9HCE3 1301 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 KRT12Q99456 494 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 MYL10Q9BUA6 226 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 PPP2R2CQ9Y2T4 447 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 IVNS1ABPQ9Y6Y0 642 aa14.54□□□□□ -0.08
CSPG4P11-201ENST00000560634 EIF6P56537 245 aaKnown RBP14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 TFAP4Q01664 338 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 HADHQ16836 314 aaKnown RBP14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 MUM1Q2TAK8 710 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 GALNT17Q6IS24 598 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 SUCLG2Q96I99 432 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 LSM14BQ9BX40 385 aaKnown RBP14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 TBC1D7Q9P0N9 293 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 ARPP21Q9UBL0 812 aaPredicted RBP14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 CAPN7Q9Y6W3 813 aa14.53□□□□□ -0.08
CSPG4P11-201ENST00000560634 INSRP06213 1382 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms