RNA–Protein interactions for RNA: ENST00000560559.1

BLM-209, Transcript of Bloom syndrome RecQ like helicase, human

TSL 3

Gene BLM, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BLM-209	ENST00000560559	TMEM87B	Q96K49	555 aa		6.61	□□□□□ -1.35
BLM-209	ENST00000560559	MIR1-1HG	Q9H1L0	117 aa		6.61	□□□□□ -1.35
BLM-209	ENST00000560559	ADAMTS10	Q9H324	1103 aa		6.61	□□□□□ -1.35
BLM-209	ENST00000560559	TJP2	Q9UDY2	1190 aa		6.61	□□□□□ -1.35
BLM-209	ENST00000560559	POLA1	P09884	1462 aa	Predicted RBP	6.6	□□□□□ -1.35
BLM-209	ENST00000560559	GRIN2B	Q13224	1484 aa		6.6	□□□□□ -1.35
BLM-209	ENST00000560559	TPP2	P29144	1249 aa	Predicted RBP	6.6	□□□□□ -1.35
BLM-209	ENST00000560559	GNA15	P30679	374 aa		6.6	□□□□□ -1.35
BLM-209	ENST00000560559	MAP3K11	Q16584	847 aa		6.6	□□□□□ -1.35
BLM-209	ENST00000560559	DIEXF	Q68CQ4	756 aa	Known RBP	6.6	□□□□□ -1.35
BLM-209	ENST00000560559	SLC26A8	Q96RN1	970 aa		6.6	□□□□□ -1.35
BLM-209	ENST00000560559	IVNS1ABP	Q9Y6Y0	642 aa		6.6	□□□□□ -1.35
BLM-209	ENST00000560559	KIF21B	O75037	1637 aa		6.6	□□□□□ -1.35
BLM-209	ENST00000560559	WASH4P	A8MWX3	477 aa		6.59	□□□□□ -1.35
BLM-209	ENST00000560559	ETV2	O00321	342 aa	Predicted RBP	6.59	□□□□□ -1.35
BLM-209	ENST00000560559	HPX	P02790	462 aa		6.59	□□□□□ -1.35
BLM-209	ENST00000560559	SYTL4	Q96C24	671 aa	Predicted RBP	6.59	□□□□□ -1.35
BLM-209	ENST00000560559	TRAIP	Q9BWF2	469 aa		6.59	□□□□□ -1.35
BLM-209	ENST00000560559	CD320	Q9NPF0	282 aa		6.59	□□□□□ -1.35
BLM-209	ENST00000560559	GPATCH2	Q9NW75	528 aa		6.59	□□□□□ -1.35
BLM-209	ENST00000560559	PRDM2	Q13029	1718 aa		6.59	□□□□□ -1.36
BLM-209	ENST00000560559	WDR97	A6NE52	1622 aa		6.58	□□□□□ -1.36
BLM-209	ENST00000560559	ADCY10	Q96PN6	1610 aa		6.58	□□□□□ -1.36
BLM-209	ENST00000560559	RBAK-RBAKDN	I3L0D1	243 aa		6.58	□□□□□ -1.36
BLM-209	ENST00000560559	NUAK1	O60285	661 aa		6.58	□□□□□ -1.36
BLM-209	ENST00000560559	GLDC	P23378	1020 aa		6.58	□□□□□ -1.36
BLM-209	ENST00000560559	TRHR	P34981	398 aa	Predicted RBP	6.58	□□□□□ -1.36
BLM-209	ENST00000560559	AGMO	Q6ZNB7	445 aa		6.58	□□□□□ -1.36
BLM-209	ENST00000560559	AMIGO3	Q86WK7	504 aa		6.58	□□□□□ -1.36
BLM-209	ENST00000560559	MCAT	Q8IVS2	390 aa	Known RBP	6.58	□□□□□ -1.36
BLM-209	ENST00000560559	DUSP13	Q9UII6	198 aa		6.58	□□□□□ -1.36
BLM-209	ENST00000560559	KCNH3	Q9ULD8	1083 aa		6.58	□□□□□ -1.36
BLM-209	ENST00000560559	SMG5	Q9UPR3	1016 aa	Known RBP	6.58	□□□□□ -1.36
BLM-209	ENST00000560559	SHROOM2	Q13796	1616 aa		6.58	□□□□□ -1.36
BLM-209	ENST00000560559	KRTAP9-7	A8MTY7	169 aa		6.57	□□□□□ -1.36
BLM-209	ENST00000560559	MED14OS	P0DP75	135 aa		6.57	□□□□□ -1.36
BLM-209	ENST00000560559	LTK	P29376	864 aa		6.57	□□□□□ -1.36
BLM-209	ENST00000560559	LIG3	P49916	1009 aa		6.57	□□□□□ -1.36
BLM-209	ENST00000560559	EGR3	Q06889	387 aa		6.57	□□□□□ -1.36
BLM-209	ENST00000560559	TSNAXIP1	Q2TAA8	658 aa		6.57	□□□□□ -1.36
BLM-209	ENST00000560559	OXR1	Q8N573	874 aa		6.57	□□□□□ -1.36
BLM-209	ENST00000560559	JARID2	Q92833	1246 aa	Predicted RBP	6.57	□□□□□ -1.36
BLM-209	ENST00000560559		Q96M66	194 aa		6.57	□□□□□ -1.36
BLM-209	ENST00000560559	KRTAP4-2	Q9BYR5	136 aa		6.57	□□□□□ -1.36
BLM-209	ENST00000560559	RNF32	Q9H0A6	362 aa		6.57	□□□□□ -1.36
BLM-209	ENST00000560559	DUSP15	Q9H1R2	295 aa	Predicted RBP	6.57	□□□□□ -1.36
BLM-209	ENST00000560559	CEP131	Q9UPN4	1083 aa		6.57	□□□□□ -1.36
BLM-209	ENST00000560559	ADAMTSL3	P82987	1691 aa		6.56	□□□□□ -1.36
BLM-209	ENST00000560559	TTLL10	Q6ZVT0	673 aa		6.56	□□□□□ -1.36
BLM-209	ENST00000560559	PDZD8	Q8NEN9	1154 aa		6.56	□□□□□ -1.36
BLM-209	ENST00000560559	DHX38	Q92620	1227 aa	Known RBP	6.56	□□□□□ -1.36
BLM-209	ENST00000560559	C19orf44	Q9H6X5	657 aa		6.56	□□□□□ -1.36
BLM-209	ENST00000560559	ADAM30	Q9UKF2	790 aa		6.56	□□□□□ -1.36
BLM-209	ENST00000560559	AK5	Q9Y6K8	562 aa		6.56	□□□□□ -1.36
BLM-209	ENST00000560559	SOGA1	O94964	1423 aa		6.56	□□□□□ -1.36
BLM-209	ENST00000560559		B8ZZF3	427 aa		6.55	□□□□□ -1.36
BLM-209	ENST00000560559	PRRG2	O14669	202 aa		6.55	□□□□□ -1.36
BLM-209	ENST00000560559	PRPF40A	O75400	957 aa	Known RBP	6.55	□□□□□ -1.36
BLM-209	ENST00000560559	INHBB	P09529	407 aa		6.55	□□□□□ -1.36
BLM-209	ENST00000560559	RLBP1	P12271	317 aa		6.55	□□□□□ -1.36
BLM-209	ENST00000560559	LINC00310	P59036	64 aa		6.55	□□□□□ -1.36
BLM-209	ENST00000560559	RPL6	Q02878	288 aa	Known RBP	6.55	□□□□□ -1.36
BLM-209	ENST00000560559	KCNA1	Q09470	495 aa		6.55	□□□□□ -1.36
BLM-209	ENST00000560559	GAB4	Q2WGN9	574 aa		6.55	□□□□□ -1.36
BLM-209	ENST00000560559	LILRA2	Q8N149	483 aa		6.55	□□□□□ -1.36
BLM-209	ENST00000560559	DNAJB8	Q8NHS0	232 aa		6.55	□□□□□ -1.36
BLM-209	ENST00000560559	ACSF2	Q96CM8	615 aa	Predicted RBP	6.55	□□□□□ -1.36
BLM-209	ENST00000560559	GPR62	Q9BZJ7	368 aa		6.55	□□□□□ -1.36
BLM-209	ENST00000560559	SLC6A17	Q9H1V8	727 aa		6.55	□□□□□ -1.36
BLM-209	ENST00000560559	RAPGEFL1	Q9UHV5	662 aa		6.55	□□□□□ -1.36
BLM-209	ENST00000560559	PRG4	Q92954	1404 aa	Predicted RBP	6.54	□□□□□ -1.36
BLM-209	ENST00000560559	FITM1	A5D6W6	292 aa		6.54	□□□□□ -1.36
BLM-209	ENST00000560559	PLCG1	P19174	1290 aa		6.54	□□□□□ -1.36
BLM-209	ENST00000560559	TFE3	P19532	575 aa	Predicted RBP	6.54	□□□□□ -1.36
BLM-209	ENST00000560559	TMEM132E	Q6IEE7	984 aa		6.54	□□□□□ -1.36
BLM-209	ENST00000560559	TSPYL5	Q86VY4	417 aa	Predicted RBP	6.54	□□□□□ -1.36
BLM-209	ENST00000560559	DTWD2	Q8NBA8	298 aa		6.54	□□□□□ -1.36
BLM-209	ENST00000560559	FAM13C	Q8NE31	585 aa		6.54	□□□□□ -1.36
BLM-209	ENST00000560559	CYB5D2	Q8WUJ1	264 aa		6.54	□□□□□ -1.36
BLM-209	ENST00000560559	IRF2BPL	Q9H1B7	796 aa		6.54	□□□□□ -1.36
BLM-209	ENST00000560559	IQSEC2	Q5JU85	1478 aa		6.53	□□□□□ -1.36
BLM-209	ENST00000560559	TEX14	Q8IWB6	1497 aa		6.53	□□□□□ -1.36
BLM-209	ENST00000560559	NCAN	O14594	1321 aa		6.53	□□□□□ -1.36
BLM-209	ENST00000560559	GLI2	P10070	1586 aa		6.53	□□□□□ -1.36
BLM-209	ENST00000560559	NUP160	Q12769	1436 aa		6.53	□□□□□ -1.36
BLM-209	ENST00000560559	BPNT1	O95861	308 aa		6.53	□□□□□ -1.36
BLM-209	ENST00000560559	ZGLP1	P0C6A0	271 aa		6.53	□□□□□ -1.36
BLM-209	ENST00000560559	TNNI2	P48788	182 aa		6.53	□□□□□ -1.36
BLM-209	ENST00000560559	YARS	P54577	528 aa	Known RBP	6.53	□□□□□ -1.36
BLM-209	ENST00000560559	ZNF605	Q86T29	641 aa		6.53	□□□□□ -1.36
BLM-209	ENST00000560559	PCDHA11	Q9Y5I1	949 aa		6.53	□□□□□ -1.36
BLM-209	ENST00000560559	MADD	Q8WXG6	1647 aa		6.53	□□□□□ -1.36
BLM-209	ENST00000560559	GRIN2A	Q12879	1464 aa		6.53	□□□□□ -1.36
BLM-209	ENST00000560559	UPK3BL1	B0FP48	263 aa		6.52	□□□□□ -1.37
BLM-209	ENST00000560559	UPK3BL2	E5RIL1	263 aa		6.52	□□□□□ -1.37
BLM-209	ENST00000560559	SRF	P11831	508 aa		6.52	□□□□□ -1.37
BLM-209	ENST00000560559	PDE6B	P35913	854 aa		6.52	□□□□□ -1.37
BLM-209	ENST00000560559	CTSW	P56202	376 aa		6.52	□□□□□ -1.37
BLM-209	ENST00000560559	MEI1	Q5TIA1	1274 aa		6.52	□□□□□ -1.37
BLM-209	ENST00000560559	IRF2BP1	Q8IU81	584 aa		6.52	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms