RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 TMX2Q9Y320 296 aa16.85■□□□□ 0.29
TPM1-223ENST00000560445 SPDYE16A6NNV3 312 aaPredicted RBP16.84■□□□□ 0.29
TPM1-223ENST00000560445 STRNO43815 780 aa16.84■□□□□ 0.29
TPM1-223ENST00000560445 CYP2D6P10635 497 aa16.84■□□□□ 0.29
TPM1-223ENST00000560445 CYP2B6P20813 491 aa16.84■□□□□ 0.29
TPM1-223ENST00000560445 TDO2P48775 406 aa16.84■□□□□ 0.29
TPM1-223ENST00000560445 MAP2K5Q13163 448 aa16.84■□□□□ 0.29
TPM1-223ENST00000560445 PPP4R3BQ5MIZ7 849 aa16.84■□□□□ 0.29
TPM1-223ENST00000560445 MFSD14CQ5VZR4 134 aa16.84■□□□□ 0.29
TPM1-223ENST00000560445 NECAB2Q7Z6G3 386 aa16.84■□□□□ 0.29
TPM1-223ENST00000560445 TICAM2Q86XR7 235 aa16.84■□□□□ 0.29
TPM1-223ENST00000560445 SHCBP1Q8NEM2 672 aa16.84■□□□□ 0.29
TPM1-223ENST00000560445 FSD1Q9BTV5 496 aa16.84■□□□□ 0.29
TPM1-223ENST00000560445 VCPKMTQ9H867 229 aa16.84■□□□□ 0.29
TPM1-223ENST00000560445 BRCA2P51587 3418 aa16.84■□□□□ 0.29
TPM1-223ENST00000560445 APPP05067 770 aa16.83■□□□□ 0.28
TPM1-223ENST00000560445 AKR1B1P15121 316 aa16.83■□□□□ 0.28
TPM1-223ENST00000560445 COPB2P35606 906 aa16.83■□□□□ 0.28
TPM1-223ENST00000560445 MORN1Q5T089 497 aa16.83■□□□□ 0.28
TPM1-223ENST00000560445 CTR9Q6PD62 1173 aa16.83■□□□□ 0.28
TPM1-223ENST00000560445 UBE2Q1Q7Z7E8 422 aa16.83■□□□□ 0.28
TPM1-223ENST00000560445 SLC44A5Q8NCS7 719 aa16.83■□□□□ 0.28
TPM1-223ENST00000560445 DYNLL2Q96FJ2 89 aa16.83■□□□□ 0.28
TPM1-223ENST00000560445 ROBO3Q96MS0 1386 aa16.83■□□□□ 0.28
TPM1-223ENST00000560445 MROH8Q9H579 483 aa16.83■□□□□ 0.28
TPM1-223ENST00000560445 SYNPO2Q9UMS6 1093 aa16.83■□□□□ 0.28
TPM1-223ENST00000560445 PCDHB15Q9Y5E8 787 aa16.83■□□□□ 0.28
TPM1-223ENST00000560445 CEP290O15078 2479 aa16.82■□□□□ 0.28
TPM1-223ENST00000560445 GPAA1O43292 621 aa16.82■□□□□ 0.28
TPM1-223ENST00000560445 MSCO60682 206 aa16.82■□□□□ 0.28
TPM1-223ENST00000560445 FLOT1O75955 427 aa16.82■□□□□ 0.28
TPM1-223ENST00000560445 PRKAR2AP13861 404 aaKnown RBP16.82■□□□□ 0.28
TPM1-223ENST00000560445 HDAC1Q13547 482 aaPredicted RBP16.82■□□□□ 0.28
TPM1-223ENST00000560445 TRIB2Q92519 343 aa16.82■□□□□ 0.28
TPM1-223ENST00000560445 PORCNQ9H237 461 aa16.82■□□□□ 0.28
TPM1-223ENST00000560445 MKI67P46013 3256 aaKnown RBP16.82■□□□□ 0.28
TPM1-223ENST00000560445 A0A1W2PRG0 241 aa16.81■□□□□ 0.28
TPM1-223ENST00000560445 PTPREP23469 700 aa16.81■□□□□ 0.28
TPM1-223ENST00000560445 ATP2B2Q01814 1243 aa16.81■□□□□ 0.28
TPM1-223ENST00000560445 PDE4BQ07343 736 aa16.81■□□□□ 0.28
TPM1-223ENST00000560445 Q3C1V9 767 aa16.81■□□□□ 0.28
TPM1-223ENST00000560445 MAP3K21Q5TCX8 1036 aa16.81■□□□□ 0.28
TPM1-223ENST00000560445 USP6NLQ92738 828 aa16.81■□□□□ 0.28
TPM1-223ENST00000560445 PLXNB2O15031 1838 aa16.81■□□□□ 0.28
TPM1-223ENST00000560445 ZNF236Q9UL36 1845 aa16.8■□□□□ 0.28
TPM1-223ENST00000560445 GSG1L2A8MUP6 293 aa16.8■□□□□ 0.28
TPM1-223ENST00000560445 MINDY4BA8MYZ0 360 aa16.8■□□□□ 0.28
TPM1-223ENST00000560445 EVI5O60447 810 aa16.8■□□□□ 0.28
TPM1-223ENST00000560445 SLC25A27O95847 323 aa16.8■□□□□ 0.28
TPM1-223ENST00000560445 HOXC6P09630 235 aa16.8■□□□□ 0.28
TPM1-223ENST00000560445 DSG3P32926 999 aa16.8■□□□□ 0.28
TPM1-223ENST00000560445 GRB14Q14449 540 aa16.8■□□□□ 0.28
TPM1-223ENST00000560445 ZNF444Q8N0Y2 327 aaPredicted RBP16.8■□□□□ 0.28
TPM1-223ENST00000560445 ABRAQ8N0Z2 381 aa16.8■□□□□ 0.28
TPM1-223ENST00000560445 OSBP2Q969R2 916 aa16.8■□□□□ 0.28
TPM1-223ENST00000560445 NBPF3Q9H094 633 aa16.8■□□□□ 0.28
TPM1-223ENST00000560445 SPATC1LQ9H0A9 340 aa16.8■□□□□ 0.28
TPM1-223ENST00000560445 A0A0G2JMZ2 1700 aa16.79■□□□□ 0.28
TPM1-223ENST00000560445 PATL2C9JE40 543 aaKnown RBP16.79■□□□□ 0.28
TPM1-223ENST00000560445 H0YGN5 161 aa16.79■□□□□ 0.28
TPM1-223ENST00000560445 CNMDO75829 334 aa16.79■□□□□ 0.28
TPM1-223ENST00000560445 EEF2P13639 858 aaKnown RBP16.79■□□□□ 0.28
TPM1-223ENST00000560445 SLFNL1Q499Z3 407 aa16.79■□□□□ 0.28
TPM1-223ENST00000560445 HABP4Q5JVS0 413 aaKnown RBP16.79■□□□□ 0.28
TPM1-223ENST00000560445 ANKRD45Q5TZF3 282 aa16.79■□□□□ 0.28
TPM1-223ENST00000560445 DPP9Q86TI2 863 aa16.79■□□□□ 0.28
TPM1-223ENST00000560445 PI4K2BQ8TCG2 481 aa16.79■□□□□ 0.28
TPM1-223ENST00000560445 EVI5LQ96CN4 794 aa16.79■□□□□ 0.28
TPM1-223ENST00000560445 NAPBQ9H115 298 aa16.79■□□□□ 0.28
TPM1-223ENST00000560445 CYP2D7A0A087X1C5 515 aa16.78■□□□□ 0.28
TPM1-223ENST00000560445 RAD21O60216 631 aa16.78■□□□□ 0.28
TPM1-223ENST00000560445 PLS1Q14651 629 aa16.78■□□□□ 0.28
TPM1-223ENST00000560445 TSHZ3Q63HK5 1081 aa16.78■□□□□ 0.28
TPM1-223ENST00000560445 SPICE1Q8N0Z3 855 aa16.78■□□□□ 0.28
TPM1-223ENST00000560445 CRBNQ96SW2 442 aa16.78■□□□□ 0.28
TPM1-223ENST00000560445 RWDD1Q9H446 243 aaPredicted RBP16.78■□□□□ 0.28
TPM1-223ENST00000560445 BTBD7Q9P203 1132 aa16.78■□□□□ 0.28
TPM1-223ENST00000560445 NYAP2Q9P242 653 aa16.78■□□□□ 0.28
TPM1-223ENST00000560445 OGDHLQ9ULD0 1010 aa16.78■□□□□ 0.28
TPM1-223ENST00000560445 CACNB2Q08289 660 aaPredicted RBP16.77■□□□□ 0.28
TPM1-223ENST00000560445 OLFML2BQ68BL8 750 aa16.77■□□□□ 0.28
TPM1-223ENST00000560445 PAWRQ96IZ0 340 aaKnown RBP16.77■□□□□ 0.28
TPM1-223ENST00000560445 MOV10L1Q9BXT6 1211 aaKnown RBP16.77■□□□□ 0.28
TPM1-223ENST00000560445 PCDH10Q9P2E7 1040 aa16.77■□□□□ 0.28
TPM1-223ENST00000560445 CTDP1Q9Y5B0 961 aaPredicted RBP16.77■□□□□ 0.28
TPM1-223ENST00000560445 FCER1AP12319 257 aa16.76■□□□□ 0.27
TPM1-223ENST00000560445 ERCC3P19447 782 aa16.76■□□□□ 0.27
TPM1-223ENST00000560445 RASA1P20936 1047 aa16.76■□□□□ 0.27
TPM1-223ENST00000560445 EVX2Q03828 476 aa16.76■□□□□ 0.27
TPM1-223ENST00000560445 ZMYM1Q5SVZ6 1142 aa16.76■□□□□ 0.27
TPM1-223ENST00000560445 NCAPG2Q86XI2 1143 aa16.76■□□□□ 0.27
TPM1-223ENST00000560445 IFNL3Q8IZI9 196 aa16.76■□□□□ 0.27
TPM1-223ENST00000560445 C11orf49Q9H6J7 331 aa16.76■□□□□ 0.27
TPM1-223ENST00000560445 STAP2Q9UGK3 403 aa16.76■□□□□ 0.27
TPM1-223ENST00000560445 GREB1LQ9C091 1923 aaPredicted RBP16.76■□□□□ 0.27
TPM1-223ENST00000560445 M0R2C6 588 aa16.75■□□□□ 0.27
TPM1-223ENST00000560445 PEX10O60683 326 aa16.75■□□□□ 0.27
TPM1-223ENST00000560445 TTLL1O95922 423 aa16.75■□□□□ 0.27
TPM1-223ENST00000560445 CHGBP05060 677 aa16.75■□□□□ 0.27
TPM1-223ENST00000560445 TSPY3P0CV98 308 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms