RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 ANO10Q9NW15 660 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.9□□□□□ -1.37e-9■□□□□ 11.1
SNRPA1-209ENST00000560307 CYP46A1Q9Y6A2 500 aa6.9□□□□□ -1.3
SNRPA1-209ENST00000560307 GOLGA6L9A6NEM1 432 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 ERICH4A6NGS2 130 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 EFCAB8A8MWE9 144 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 HIP1O00291 1037 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 EML1O00423 815 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 MYO1BO43795 1136 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 ADH1AP07327 375 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 PSMA5P28066 241 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 CHRNA4P43681 627 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 USP5P45974 858 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 NOP2P46087 812 aaKnown RBP6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 ALG1LQ6GMV1 187 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 FAM177A1Q8N128 213 aaPredicted RBP6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 GPR152Q8TDT2 470 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 LEO1Q8WVC0 666 aaPredicted RBP6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 PIK3R5Q8WYR1 880 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 GTPBP3Q969Y2 492 aaKnown RBP6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 IFT43Q96FT9 208 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 SPATA32Q96LK8 384 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 ZSCAN16Q9H4T2 348 aaPredicted RBP6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 SUV39H2Q9H5I1 410 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 CCSER2Q9H7U1 834 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 PDRG1Q9NUG6 133 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 BABAM1Q9NWV8 329 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 DACT1Q9NYF0 836 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 ORC3Q9UBD5 711 aaPredicted RBP6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 NRBP1Q9UHY1 535 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 DNAI1Q9UI46 699 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 JCADQ9P266 1359 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 ABCC6O95255 1503 aa6.89□□□□□ -1.31
SNRPA1-209ENST00000560307 TOPAZ1Q8N9V7 1692 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 PLEKHG2Q9H7P9 1386 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 VPS37CA5D8V6 355 aaPredicted RBP6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 TADA3O75528 432 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 PDGFAP04085 211 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 ZNF76P36508 570 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 TNNT3P45378 269 aaPredicted RBP6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 CENPCQ03188 943 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 TEAD4Q15561 434 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 ENOX2Q16206 610 aaKnown RBP6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 RTN1Q16799 776 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 AXDND1Q5T1B0 1012 aaPredicted RBP6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 ICE2Q659A1 982 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 LARP1BQ659C4 914 aaKnown RBP6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 TMEM214Q6NUQ4 689 aaKnown RBP6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 NOL8Q76FK4 1167 aaKnown RBP6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 SRLQ86TD4 932 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 CCDC83Q8IWF9 413 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 TRIM22Q8IYM9 498 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 PI4K2BQ8TCG2 481 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 SSH3Q8TE77 659 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 ZDHHC1Q8WTX9 485 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 ALKBH8Q96BT7 664 aaKnown RBP6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 GMCL1Q96IK5 515 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 THUMPD2Q9BTF0 503 aaKnown RBP6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 OXCT2Q9BYC2 517 aaPredicted RBP6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 NAT10Q9H0A0 1025 aaKnown RBP6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 CAPN10Q9HC96 672 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 SLC52A1Q9NWF4 448 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 CFAP45Q9UL16 551 aa6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 IQSEC3Q9UPP2 1182 aaPredicted RBP6.88□□□□□ -1.31
SNRPA1-209ENST00000560307 TSPOAP1O95153 1857 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 DIP2CQ9Y2E4 1556 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 SBNO1A3KN83 1393 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 RFX7Q2KHR2 1363 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 A0A1B0GUL7 405 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 SHISA8B8ZZ34 492 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 MYO1CO00159 1063 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 ELL2O00472 640 aaPredicted RBP6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 DHX16O60231 1041 aaKnown RBP6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 GLRX3O76003 335 aaKnown RBP6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 CPP00450 1065 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 IGHA2P01877 340 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 HMOX1P09601 288 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 HSP90B1P14625 803 aaKnown RBP6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 ZKSCAN1P17029 563 aaPredicted RBP6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 CASTP20810 708 aaKnown RBP6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 ETF1P62495 437 aaKnown RBP6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 ST3GAL1Q11201 340 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 CLN3Q13286 438 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 ORC1Q13415 861 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 ZSCAN26Q16670 478 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 LRRFIP1Q32MZ4 808 aaKnown RBP6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 ARHGAP29Q52LW3 1261 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 LDLRAD1Q5T700 205 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 KRBA2Q6ZNG9 492 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 TREML1Q86YW5 311 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 CEP57L1Q8IYX8 460 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 GJD3Q8N144 294 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 CHMP4CQ96CF2 233 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 NUDT16Q96DE0 195 aaKnown RBP6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 PPP1R13BQ96KQ4 1090 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 SLC26A8Q96RN1 970 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 ZSCAN10Q96SZ4 725 aaPredicted RBP6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 MPHOSPH8Q99549 860 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 CHMP4AQ9BY43 222 aa6.87□□□□□ -1.31
SNRPA1-209ENST00000560307 TANGO6Q9C0B7 1094 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms