RNA–Protein interactions for RNA: ENST00000559934.5

PSMA4-215, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 2,741 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-215ENST00000559934 COL18A1P39060 1754 aa24.7■■□□□ 1.54
PSMA4-215ENST00000559934 NOM1Q5C9Z4 860 aaKnown RBP24.7■■□□□ 1.54
PSMA4-215ENST00000559934 CT47A1Q5JQC4 288 aaPredicted RBP24.7■■□□□ 1.54
PSMA4-215ENST00000559934 MAGEB6Q8N7X4 407 aa24.7■■□□□ 1.54
PSMA4-215ENST00000559934 MYH6P13533 1939 aa24.69■■□□□ 1.54
PSMA4-215ENST00000559934 KCPQ6ZWJ8 1503 aa24.69■■□□□ 1.54
PSMA4-215ENST00000559934 NID2Q14112 1375 aa24.69■■□□□ 1.54
PSMA4-215ENST00000559934 SRGAP2O75044 1071 aa24.69■■□□□ 1.54
PSMA4-215ENST00000559934 COPB1P53618 953 aaKnown RBP24.69■■□□□ 1.54
PSMA4-215ENST00000559934 GOLGA6L1Q8N7Z2 621 aa24.69■■□□□ 1.54
PSMA4-215ENST00000559934 CCDC148Q8NFR7 591 aa24.69■■□□□ 1.54
PSMA4-215ENST00000559934 ACBD3Q9H3P7 528 aa24.69■■□□□ 1.54
PSMA4-215ENST00000559934 MYO1AQ9UBC5 1043 aa24.69■■□□□ 1.54
PSMA4-215ENST00000559934 PRDM1O75626 825 aa24.69■■□□□ 1.54
PSMA4-215ENST00000559934 ZMYND10O75800 440 aa24.69■■□□□ 1.54
PSMA4-215ENST00000559934 VGLL2Q8N8G2 317 aa24.69■■□□□ 1.54
PSMA4-215ENST00000559934 MMS19Q96T76 1030 aa24.69■■□□□ 1.54
PSMA4-215ENST00000559934 LIMA1Q9UHB6 759 aaKnown RBP24.69■■□□□ 1.54
PSMA4-215ENST00000559934 USP14P54578 494 aa24.68■■□□□ 1.54
PSMA4-215ENST00000559934 RRAGBQ5VZM2 374 aa24.68■■□□□ 1.54
PSMA4-215ENST00000559934 FANCBQ8NB91 859 aa24.68■■□□□ 1.54
PSMA4-215ENST00000559934 KRT23Q9C075 422 aa24.68■■□□□ 1.54
PSMA4-215ENST00000559934 ALS2Q96Q42 1657 aa24.68■■□□□ 1.54
PSMA4-215ENST00000559934 GSG1L2A8MUP6 293 aa24.68■■□□□ 1.54
PSMA4-215ENST00000559934 TTC31Q49AM3 519 aaPredicted RBP24.68■■□□□ 1.54
PSMA4-215ENST00000559934 TRAPPC11Q7Z392 1133 aa24.68■■□□□ 1.54
PSMA4-215ENST00000559934 HELBQ8NG08 1087 aaPredicted RBP24.68■■□□□ 1.54
PSMA4-215ENST00000559934 AFAP1L1Q8TED9 768 aa24.68■■□□□ 1.54
PSMA4-215ENST00000559934 CNNM2Q9H8M5 875 aa24.68■■□□□ 1.54
PSMA4-215ENST00000559934 XDHP47989 1333 aa24.67■■□□□ 1.54
PSMA4-215ENST00000559934 PRPF6O94906 941 aaKnown RBP24.67■■□□□ 1.54
PSMA4-215ENST00000559934 GPTP24298 496 aa24.67■■□□□ 1.54
PSMA4-215ENST00000559934 GSPT2Q8IYD1 628 aaKnown RBP24.67■■□□□ 1.54
PSMA4-215ENST00000559934 ZNF654Q8IZM8 581 aa24.67■■□□□ 1.54
PSMA4-215ENST00000559934 ZNF512BQ96KM6 892 aaPredicted RBP24.67■■□□□ 1.54
PSMA4-215ENST00000559934 PLA2G12BQ9BX93 195 aa24.67■■□□□ 1.54
PSMA4-215ENST00000559934 HPCAL4Q9UM19 191 aa24.67■■□□□ 1.54
PSMA4-215ENST00000559934 UBR2Q8IWV8 1755 aa24.67■■□□□ 1.54
PSMA4-215ENST00000559934 ATP1A1P05023 1023 aaKnown RBP24.67■■□□□ 1.54
PSMA4-215ENST00000559934 CORO7P57737 925 aa24.67■■□□□ 1.54
PSMA4-215ENST00000559934 ZNF174Q15697 407 aa24.67■■□□□ 1.54
PSMA4-215ENST00000559934 ZBTB38Q8NAP3 1195 aaPredicted RBP24.67■■□□□ 1.54
PSMA4-215ENST00000559934 CAPZA3Q96KX2 299 aa24.67■■□□□ 1.54
PSMA4-215ENST00000559934 BCL9LQ86UU0 1499 aa24.66■■□□□ 1.54
PSMA4-215ENST00000559934 MAPK8IP1Q9UQF2 711 aa24.66■■□□□ 1.54
PSMA4-215ENST00000559934 EPN1Q9Y6I3 576 aaPredicted RBP24.66■■□□□ 1.54
PSMA4-215ENST00000559934 NDUFA10O95299 355 aa24.66■■□□□ 1.54
PSMA4-215ENST00000559934 TUBBP07437 444 aa24.66■■□□□ 1.54
PSMA4-215ENST00000559934 ZC3H4Q9UPT8 1303 aaKnown RBP24.65■■□□□ 1.54
PSMA4-215ENST00000559934 TDO2P48775 406 aa24.65■■□□□ 1.54
PSMA4-215ENST00000559934 AARSP49588 968 aaKnown RBP eCLIP24.65■■□□□ 1.54
PSMA4-215ENST00000559934 SART3Q15020 963 aaKnown RBP24.65■■□□□ 1.54
PSMA4-215ENST00000559934 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.65■■□□□ 1.54
PSMA4-215ENST00000559934 KCNJ18B7U540 433 aa24.65■■□□□ 1.54
PSMA4-215ENST00000559934 KCNJ12Q14500 433 aa24.65■■□□□ 1.54
PSMA4-215ENST00000559934 TCP11X2Q5H9J9 407 aa24.65■■□□□ 1.54
PSMA4-215ENST00000559934 ERICH2A1L162 156 aa24.64■■□□□ 1.54
PSMA4-215ENST00000559934 LRRC10BA6NIK2 292 aa24.64■■□□□ 1.54
PSMA4-215ENST00000559934 SNAP23O00161 211 aa24.64■■□□□ 1.54
PSMA4-215ENST00000559934 ARID4AP29374 1257 aaPredicted RBP24.64■■□□□ 1.54
PSMA4-215ENST00000559934 PPFIA4O75335 1185 aa24.64■■□□□ 1.53
PSMA4-215ENST00000559934 PDE8BO95263 885 aa24.64■■□□□ 1.53
PSMA4-215ENST00000559934 UBXN1Q04323 297 aa24.64■■□□□ 1.53
PSMA4-215ENST00000559934 LCORLQ8N3X6 602 aa24.64■■□□□ 1.53
PSMA4-215ENST00000559934 VIPAS39Q9H9C1 493 aa24.64■■□□□ 1.53
PSMA4-215ENST00000559934 C1orf167Q5SNV9 1468 aa24.64■■□□□ 1.53
PSMA4-215ENST00000559934 CCDC196A0A1B0GTZ2 297 aa24.63■■□□□ 1.53
PSMA4-215ENST00000559934 STAG1Q8WVM7 1258 aa24.63■■□□□ 1.53
PSMA4-215ENST00000559934 MTRQ99707 1265 aa24.63■■□□□ 1.53
PSMA4-215ENST00000559934 MYBL2P10244 700 aa24.63■■□□□ 1.53
PSMA4-215ENST00000559934 PKN1Q16512 942 aa24.63■■□□□ 1.53
PSMA4-215ENST00000559934 ICE2Q659A1 982 aa24.63■■□□□ 1.53
PSMA4-215ENST00000559934 NELFBQ8WX92 580 aa24.63■■□□□ 1.53
PSMA4-215ENST00000559934 TTC26A0AVF1 554 aa24.63■■□□□ 1.53
PSMA4-215ENST00000559934 ANKRD18BA2A2Z9 1011 aa24.63■■□□□ 1.53
PSMA4-215ENST00000559934 SMIM22K7EJ46 135 aa24.63■■□□□ 1.53
PSMA4-215ENST00000559934 KRT2P35908 639 aa24.63■■□□□ 1.53
PSMA4-215ENST00000559934 HERVK_113P62684 666 aa24.63■■□□□ 1.53
PSMA4-215ENST00000559934 PAK1Q13153 545 aa24.63■■□□□ 1.53
PSMA4-215ENST00000559934 HINFPQ9BQA5 517 aa24.63■■□□□ 1.53
PSMA4-215ENST00000559934 TIAM2Q8IVF5 1701 aa24.62■■□□□ 1.53
PSMA4-215ENST00000559934 ADAMTSL3P82987 1691 aa24.62■■□□□ 1.53
PSMA4-215ENST00000559934 PSMD14O00487 310 aa24.62■■□□□ 1.53
PSMA4-215ENST00000559934 GGCXP38435 758 aa24.62■■□□□ 1.53
PSMA4-215ENST00000559934 TRIM28Q13263 835 aaKnown RBP24.62■■□□□ 1.53
PSMA4-215ENST00000559934 CTCFLQ8NI51 663 aaPredicted RBP24.62■■□□□ 1.53
PSMA4-215ENST00000559934 RWDD2AQ9UIY3 292 aa24.62■■□□□ 1.53
PSMA4-215ENST00000559934 SLC4A4Q9Y6R1 1079 aa24.62■■□□□ 1.53
PSMA4-215ENST00000559934 CTR9Q6PD62 1173 aa24.62■■□□□ 1.53
PSMA4-215ENST00000559934 SPATA5Q8NB90 893 aa24.62■■□□□ 1.53
PSMA4-215ENST00000559934 GDAQ9Y2T3 454 aa24.62■■□□□ 1.53
PSMA4-215ENST00000559934 SAR1BQ9Y6B6 198 aa24.62■■□□□ 1.53
PSMA4-215ENST00000559934 MYH13Q9UKX3 1938 aa24.62■■□□□ 1.53
PSMA4-215ENST00000559934 GTF2A1P52655 376 aaPredicted RBP24.61■■□□□ 1.53
PSMA4-215ENST00000559934 STIM1Q13586 685 aa24.61■■□□□ 1.53
PSMA4-215ENST00000559934 COG1Q8WTW3 980 aa24.61■■□□□ 1.53
PSMA4-215ENST00000559934 FERMT2Q96AC1 680 aa24.61■■□□□ 1.53
PSMA4-215ENST00000559934 PHF20Q9BVI0 1012 aa24.61■■□□□ 1.53
PSMA4-215ENST00000559934 CDHR2Q9BYE9 1310 aa24.61■■□□□ 1.53
PSMA4-215ENST00000559934 CTSWP56202 376 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms