RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 ISY1Q9ULR0 285 aaKnown RBP16.82■□□□□ 0.28
SMAD6-204ENST00000559931 GREB1LQ9C091 1923 aaPredicted RBP16.82■□□□□ 0.28
SMAD6-204ENST00000559931 A0A1W2PRG0 241 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 C19orf81C9J6K1 198 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 SH2B2O14492 632 aaPredicted RBP16.81■□□□□ 0.28
SMAD6-204ENST00000559931 CXCL11O14625 94 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 ZBTB48P10074 688 aaPredicted RBP16.81■□□□□ 0.28
SMAD6-204ENST00000559931 GJA5P36382 358 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 USP14P54578 494 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 HMGCS2P54868 508 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 BACE1P56817 501 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 SNAPC2Q13487 334 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 SEC23AQ15436 765 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 RCSD1Q6JBY9 416 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 USP17L2Q6R6M4 530 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 SYNE3Q6ZMZ3 975 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 GADL1Q6ZQY3 521 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 RASAL3Q86YV0 1011 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 ANKS1AQ92625 1134 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 MKL1Q969V6 931 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 IL17RAQ96F46 866 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 KIF2CQ99661 725 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 TMX2Q9Y320 296 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 PHIPQ8WWQ0 1821 aa16.81■□□□□ 0.28
SMAD6-204ENST00000559931 GTF2A2P52657 109 aa16.8■□□□□ 0.28
SMAD6-204ENST00000559931 CATIPQ7Z7H3 387 aa16.8■□□□□ 0.28
SMAD6-204ENST00000559931 SPICE1Q8N0Z3 855 aa16.8■□□□□ 0.28
SMAD6-204ENST00000559931 PNMA1Q8ND90 353 aa16.8■□□□□ 0.28
SMAD6-204ENST00000559931 BRF1Q92994 677 aa16.8■□□□□ 0.28
SMAD6-204ENST00000559931 KIAA1683Q9H0B3 1180 aa16.8■□□□□ 0.28
SMAD6-204ENST00000559931 LY9Q9HBG7 655 aa16.8■□□□□ 0.28
SMAD6-204ENST00000559931 SENP2Q9HC62 589 aa16.8■□□□□ 0.28
SMAD6-204ENST00000559931 F5H6K3 240 aa16.79■□□□□ 0.28
SMAD6-204ENST00000559931 SLC10A3P09131 477 aa16.79■□□□□ 0.28
SMAD6-204ENST00000559931 CETPP11597 493 aa16.79■□□□□ 0.28
SMAD6-204ENST00000559931 LIFRP42702 1097 aa16.79■□□□□ 0.28
SMAD6-204ENST00000559931 KLRC3Q07444 240 aa16.79■□□□□ 0.28
SMAD6-204ENST00000559931 ANKRD1Q15327 319 aa16.79■□□□□ 0.28
SMAD6-204ENST00000559931 SLFN13Q68D06 897 aa16.79■□□□□ 0.28
SMAD6-204ENST00000559931 NOL8Q76FK4 1167 aaKnown RBP16.79■□□□□ 0.28
SMAD6-204ENST00000559931 FASTKD5Q7L8L6 764 aaKnown RBP16.79■□□□□ 0.28
SMAD6-204ENST00000559931 LARP6Q9BRS8 491 aaKnown RBP16.79■□□□□ 0.28
SMAD6-204ENST00000559931 VCPKMTQ9H867 229 aa16.79■□□□□ 0.28
SMAD6-204ENST00000559931 KCNH4Q9UQ05 1017 aa16.79■□□□□ 0.28
SMAD6-204ENST00000559931 SLC12A7Q9Y666 1083 aa16.79■□□□□ 0.28
SMAD6-204ENST00000559931 PCNTO95613 3336 aa16.79■□□□□ 0.28
SMAD6-204ENST00000559931 CCL15-CCL14A0A0B4J2E2 113 aa16.78■□□□□ 0.28
SMAD6-204ENST00000559931 FAM155AB1AL88 458 aaPredicted RBP16.78■□□□□ 0.28
SMAD6-204ENST00000559931 ST18O60284 1047 aa16.78■□□□□ 0.28
SMAD6-204ENST00000559931 NOVP48745 357 aa16.78■□□□□ 0.28
SMAD6-204ENST00000559931 APOBRQ0VD83 1088 aa16.78■□□□□ 0.28
SMAD6-204ENST00000559931 CCL15Q16663 113 aa16.78■□□□□ 0.28
SMAD6-204ENST00000559931 NUP133Q8WUM0 1156 aa16.78■□□□□ 0.28
SMAD6-204ENST00000559931 ZIC5Q96T25 663 aa16.78■□□□□ 0.28
SMAD6-204ENST00000559931 EMILIN3Q9NT22 766 aa16.78■□□□□ 0.28
SMAD6-204ENST00000559931 SYNPO2Q9UMS6 1093 aa16.78■□□□□ 0.28
SMAD6-204ENST00000559931 A0A0G2JLL6 359 aaPredicted RBP16.77■□□□□ 0.28
SMAD6-204ENST00000559931 KLF18A0A0U1RQI7 1052 aa16.77■□□□□ 0.28
SMAD6-204ENST00000559931 MANSC4A6NHS7 340 aaPredicted RBP16.77■□□□□ 0.28
SMAD6-204ENST00000559931 AK2P54819 239 aa16.77■□□□□ 0.28
SMAD6-204ENST00000559931 DGKZQ13574 1117 aa16.77■□□□□ 0.28
SMAD6-204ENST00000559931 CCDC96Q2M329 555 aa16.77■□□□□ 0.28
SMAD6-204ENST00000559931 PRRT2Q7Z6L0 340 aaPredicted RBP16.77■□□□□ 0.28
SMAD6-204ENST00000559931 ZNF654Q8IZM8 581 aa16.77■□□□□ 0.28
SMAD6-204ENST00000559931 GMCL1P1Q8NEA9 526 aa16.77■□□□□ 0.28
SMAD6-204ENST00000559931 NDUFB10O96000 172 aa16.76■□□□□ 0.27
SMAD6-204ENST00000559931 SLC1A4P43007 532 aa16.76■□□□□ 0.27
SMAD6-204ENST00000559931 KIF23Q02241 960 aaPredicted RBP16.76■□□□□ 0.27
SMAD6-204ENST00000559931 NOGQ13253 232 aa16.76■□□□□ 0.27
SMAD6-204ENST00000559931 TOB2Q14106 344 aaPredicted RBP16.76■□□□□ 0.27
SMAD6-204ENST00000559931 SH3D19Q5HYK7 790 aa16.76■□□□□ 0.27
SMAD6-204ENST00000559931 SAMD1Q6SPF0 538 aaPredicted RBP16.76■□□□□ 0.27
SMAD6-204ENST00000559931 SGMS1Q86VZ5 419 aa16.76■□□□□ 0.27
SMAD6-204ENST00000559931 RAB11FIP4Q86YS3 637 aa16.76■□□□□ 0.27
SMAD6-204ENST00000559931 LPAR1Q92633 364 aa16.76■□□□□ 0.27
SMAD6-204ENST00000559931 MS4A4AQ96JQ5 239 aa16.76■□□□□ 0.27
SMAD6-204ENST00000559931 MYL10Q9BUA6 226 aa16.76■□□□□ 0.27
SMAD6-204ENST00000559931 ALDH8A1Q9H2A2 487 aaPredicted RBP16.76■□□□□ 0.27
SMAD6-204ENST00000559931 BRPF3Q9ULD4 1205 aa16.76■□□□□ 0.27
SMAD6-204ENST00000559931 PTPRFP10586 1907 aa16.75■□□□□ 0.27
SMAD6-204ENST00000559931 ZBTB43O43298 467 aa16.75■□□□□ 0.27
SMAD6-204ENST00000559931 CALM1P0DP23 149 aa16.75■□□□□ 0.27
SMAD6-204ENST00000559931 CALM2P0DP24 149 aa16.75■□□□□ 0.27
SMAD6-204ENST00000559931 CALM3P0DP25 149 aa16.75■□□□□ 0.27
SMAD6-204ENST00000559931 BMP3P12645 472 aa16.75■□□□□ 0.27
SMAD6-204ENST00000559931 INHBEP58166 350 aa16.75■□□□□ 0.27
SMAD6-204ENST00000559931 IKQ13123 557 aaPredicted RBP16.75■□□□□ 0.27
SMAD6-204ENST00000559931 KIAA1755Q5JYT7 1200 aa16.75■□□□□ 0.27
SMAD6-204ENST00000559931 FAM83BQ5T0W9 1011 aa16.75■□□□□ 0.27
SMAD6-204ENST00000559931 CCDC144CPQ8IYA2 1237 aa16.75■□□□□ 0.27
SMAD6-204ENST00000559931 FBXL16Q8N461 479 aa16.75■□□□□ 0.27
SMAD6-204ENST00000559931 PROCA1Q8NCQ7 364 aaPredicted RBP16.75■□□□□ 0.27
SMAD6-204ENST00000559931 IL27Q8NEV9 243 aa16.75■□□□□ 0.27
SMAD6-204ENST00000559931 DCAF4Q8WV16 495 aa16.75■□□□□ 0.27
SMAD6-204ENST00000559931 NUP88Q99567 741 aaPredicted RBP16.75■□□□□ 0.27
SMAD6-204ENST00000559931 TANGO6Q9C0B7 1094 aa16.75■□□□□ 0.27
SMAD6-204ENST00000559931 GPCPD1Q9NPB8 672 aa16.75■□□□□ 0.27
SMAD6-204ENST00000559931 FRMPD2Q68DX3 1309 aaPredicted RBP16.74■□□□□ 0.27
SMAD6-204ENST00000559931 GOLGA8BA8MQT2 603 aa16.74■□□□□ 0.27
SMAD6-204ENST00000559931 DDAH1O94760 285 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms