RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 USP17L5A8MUK1 530 aa12.18□□□□□ -0.46
TPM1-221ENST00000559831 KIF3CO14782 793 aa12.18□□□□□ -0.46
TPM1-221ENST00000559831 CALM1P0DP23 149 aa12.18□□□□□ -0.46
TPM1-221ENST00000559831 CALM2P0DP24 149 aa12.18□□□□□ -0.46
TPM1-221ENST00000559831 CALM3P0DP25 149 aa12.18□□□□□ -0.46
TPM1-221ENST00000559831 NOVP48745 357 aa12.18□□□□□ -0.46
TPM1-221ENST00000559831 ST3GAL1Q11201 340 aa12.18□□□□□ -0.46
TPM1-221ENST00000559831 VGLL4Q14135 290 aa12.18□□□□□ -0.46
TPM1-221ENST00000559831 RTN1Q16799 776 aa12.18□□□□□ -0.46
TPM1-221ENST00000559831 NOL9Q5SY16 702 aaKnown RBP12.18□□□□□ -0.46
TPM1-221ENST00000559831 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.18□□□□□ -0.46
TPM1-221ENST00000559831 RASGRP2Q7LDG7 609 aa12.18□□□□□ -0.46
TPM1-221ENST00000559831 ACER1Q8TDN7 264 aa12.18□□□□□ -0.46
TPM1-221ENST00000559831 GTF3C6Q969F1 213 aa12.18□□□□□ -0.46
TPM1-221ENST00000559831 FEZ1Q99689 392 aa12.18□□□□□ -0.46
TPM1-221ENST00000559831 ELP3Q9H9T3 547 aa12.18□□□□□ -0.46
TPM1-221ENST00000559831 ISY1Q9ULR0 285 aaKnown RBP12.18□□□□□ -0.46
TPM1-221ENST00000559831 BAZ2BQ9UIF8 2168 aaKnown RBP12.18□□□□□ -0.46
TPM1-221ENST00000559831 PTPRFP10586 1907 aa12.17□□□□□ -0.46
TPM1-221ENST00000559831 UBE2Q2LH0YL09 131 aa12.17□□□□□ -0.46
TPM1-221ENST00000559831 CPLX1O14810 134 aa12.17□□□□□ -0.46
TPM1-221ENST00000559831 DTNBO60941 627 aa12.17□□□□□ -0.46
TPM1-221ENST00000559831 PTPRAP18433 802 aa12.17□□□□□ -0.46
TPM1-221ENST00000559831 ECE1P42892 770 aa12.17□□□□□ -0.46
TPM1-221ENST00000559831 TROAPQ12815 778 aa12.17□□□□□ -0.46
TPM1-221ENST00000559831 CUL4AQ13619 759 aa12.17□□□□□ -0.46
TPM1-221ENST00000559831 ZYXQ15942 572 aaKnown RBP12.17□□□□□ -0.46
TPM1-221ENST00000559831 CCDC96Q2M329 555 aa12.17□□□□□ -0.46
TPM1-221ENST00000559831 SIAH1Q8IUQ4 282 aa12.17□□□□□ -0.46
TPM1-221ENST00000559831 ANKRD13AQ8IZ07 590 aa12.17□□□□□ -0.46
TPM1-221ENST00000559831 FANCBQ8NB91 859 aa12.17□□□□□ -0.46
TPM1-221ENST00000559831 CTCFLQ8NI51 663 aaPredicted RBP12.17□□□□□ -0.46
TPM1-221ENST00000559831 MKL1Q969V6 931 aa12.17□□□□□ -0.46
TPM1-221ENST00000559831 CLMNQ96JQ2 1002 aa12.17□□□□□ -0.46
TPM1-221ENST00000559831 SH2D4AQ9H788 454 aa12.17□□□□□ -0.46
TPM1-221ENST00000559831 AS3MTQ9HBK9 375 aa12.17□□□□□ -0.46
TPM1-221ENST00000559831 GBA2Q9HCG7 927 aaPredicted RBP12.17□□□□□ -0.46
TPM1-221ENST00000559831 SNCAIPQ9Y6H5 919 aa12.17□□□□□ -0.46
TPM1-221ENST00000559831 FRMPD2Q68DX3 1309 aaPredicted RBP12.16□□□□□ -0.46
TPM1-221ENST00000559831 A0A1W2PRG0 241 aa12.16□□□□□ -0.46
TPM1-221ENST00000559831 PPFIA3O75145 1194 aa12.16□□□□□ -0.46
TPM1-221ENST00000559831 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
TPM1-221ENST00000559831 PARP1P09874 1014 aaKnown RBP12.16□□□□□ -0.46
TPM1-221ENST00000559831 CDC27P30260 824 aa12.16□□□□□ -0.46
TPM1-221ENST00000559831 ADD1P35611 737 aaKnown RBP12.16□□□□□ -0.46
TPM1-221ENST00000559831 RCAN1P53805 252 aa12.16□□□□□ -0.46
TPM1-221ENST00000559831 GRM4Q14833 912 aa12.16□□□□□ -0.46
TPM1-221ENST00000559831 MAP3K11Q16584 847 aa12.16□□□□□ -0.46
TPM1-221ENST00000559831 SLFN13Q68D06 897 aa12.16□□□□□ -0.46
TPM1-221ENST00000559831 C2orf69Q8N8R5 385 aa12.16□□□□□ -0.46
TPM1-221ENST00000559831 SMC1BQ8NDV3 1235 aa12.16□□□□□ -0.46
TPM1-221ENST00000559831 GOPCQ9HD26 462 aa12.16□□□□□ -0.46
TPM1-221ENST00000559831 RBM28Q9NW13 759 aaKnown RBP12.16□□□□□ -0.46
TPM1-221ENST00000559831 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.16□□□□□ -0.46
TPM1-221ENST00000559831 ZHX2Q9Y6X8 837 aa12.16□□□□□ -0.46
TPM1-221ENST00000559831 NID2Q14112 1375 aa12.16□□□□□ -0.46
TPM1-221ENST00000559831 CCDC196A0A1B0GTZ2 297 aa12.15□□□□□ -0.46
TPM1-221ENST00000559831 TRIM75PA6NK02 468 aa12.15□□□□□ -0.46
TPM1-221ENST00000559831 DHX16O60231 1041 aaKnown RBP12.15□□□□□ -0.46
TPM1-221ENST00000559831 NDUFB10O96000 172 aa12.15□□□□□ -0.46
TPM1-221ENST00000559831 GOLGA8HP0CJ92 632 aa12.15□□□□□ -0.46
TPM1-221ENST00000559831 PDHBP11177 359 aa12.15□□□□□ -0.46
TPM1-221ENST00000559831 KIF5BP33176 963 aa12.15□□□□□ -0.46
TPM1-221ENST00000559831 CPLX2Q6PUV4 134 aaKnown RBP12.15□□□□□ -0.46
TPM1-221ENST00000559831 USP17L2Q6R6M4 530 aa12.15□□□□□ -0.46
TPM1-221ENST00000559831 CMTR1Q8N1G2 835 aaKnown RBP12.15□□□□□ -0.46
TPM1-221ENST00000559831 ZNF784Q8NCA9 323 aaPredicted RBP12.15□□□□□ -0.46
TPM1-221ENST00000559831 CNKSR2Q8WXI2 1034 aa12.15□□□□□ -0.46
TPM1-221ENST00000559831 GPCPD1Q9NPB8 672 aa12.15□□□□□ -0.46
TPM1-221ENST00000559831 FAM217BQ9NTX9 383 aaPredicted RBP12.15□□□□□ -0.46
TPM1-221ENST00000559831 SMC3Q9UQE7 1217 aa12.15□□□□□ -0.46
TPM1-221ENST00000559831 TMX2Q9Y320 296 aa12.15□□□□□ -0.46
TPM1-221ENST00000559831 PTPDC1A2A3K4 754 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 USP17L10C9JJH3 530 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 F5H6K3 240 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 JAK2O60674 1132 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 PLEKHA8P1O95397 391 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 SLC1A4P43007 532 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 FKBP1BP68106 108 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 KLRC3Q07444 240 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 SPP2Q13103 211 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 MTMR2Q13614 643 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 TMTC3Q6ZXV5 915 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 KCTD1Q719H9 257 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 SPICE1Q8N0Z3 855 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 STAG2Q8N3U4 1231 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 CCDC82Q8N4S0 544 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 ZNF280CQ8ND82 737 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 NSUN7Q8NE18 718 aaKnown RBP12.14□□□□□ -0.47
TPM1-221ENST00000559831 GMCL1P1Q8NEA9 526 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 RBM46Q8TBY0 533 aaKnown RBP12.14□□□□□ -0.47
TPM1-221ENST00000559831 DCAF4Q8WV16 495 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 DDX11Q96FC9 970 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 OTUD5Q96G74 571 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 INTS4Q96HW7 963 aaKnown RBP12.14□□□□□ -0.47
TPM1-221ENST00000559831 MAP3K14Q99558 947 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 NUP88Q99567 741 aaPredicted RBP12.14□□□□□ -0.47
TPM1-221ENST00000559831 WDR18Q9BV38 432 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 VCPKMTQ9H867 229 aa12.14□□□□□ -0.47
TPM1-221ENST00000559831 MAD2L2Q9UI95 211 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms