RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 KIAA1755Q5JYT7 1200 aa14.61□□□□□ -0.07
GABPB1-208ENST00000558970 IFIT1BQ5T764 474 aaKnown RBP14.61□□□□□ -0.07
GABPB1-208ENST00000558970 RAB11FIP4Q86YS3 637 aa14.61□□□□□ -0.07
GABPB1-208ENST00000558970 TMEM47Q9BQJ4 181 aa14.61□□□□□ -0.07
GABPB1-208ENST00000558970 WDR18Q9BV38 432 aa14.61□□□□□ -0.07
GABPB1-208ENST00000558970 TMOD4Q9NZQ9 345 aa14.61□□□□□ -0.07
GABPB1-208ENST00000558970 NYAP2Q9P242 653 aa14.61□□□□□ -0.07
GABPB1-208ENST00000558970 KCNH4Q9UQ05 1017 aa14.61□□□□□ -0.07
GABPB1-208ENST00000558970 COL11A1P12107 1806 aaPredicted RBP14.61□□□□□ -0.07
GABPB1-208ENST00000558970 A0A0G2JLL6 359 aaPredicted RBP14.6□□□□□ -0.07
GABPB1-208ENST00000558970 PSMA5P28066 241 aa14.6□□□□□ -0.07
GABPB1-208ENST00000558970 NOGQ13253 232 aa14.6□□□□□ -0.07
GABPB1-208ENST00000558970 WTAPQ15007 396 aa14.6□□□□□ -0.07
GABPB1-208ENST00000558970 SART3Q15020 963 aaKnown RBP14.6□□□□□ -0.07
GABPB1-208ENST00000558970 TREML2Q5T2D2 321 aa14.6□□□□□ -0.07
GABPB1-208ENST00000558970 RCSD1Q6JBY9 416 aa14.6□□□□□ -0.07
GABPB1-208ENST00000558970 NFXL1Q6ZNB6 911 aa14.6□□□□□ -0.07
GABPB1-208ENST00000558970 NOL8Q76FK4 1167 aaKnown RBP14.6□□□□□ -0.07
GABPB1-208ENST00000558970 PRRT2Q7Z6L0 340 aaPredicted RBP14.6□□□□□ -0.07
GABPB1-208ENST00000558970 BRI3BPQ8WY22 251 aa14.6□□□□□ -0.07
GABPB1-208ENST00000558970 ABHD8Q96I13 439 aa14.6□□□□□ -0.07
GABPB1-208ENST00000558970 MS4A4AQ96JQ5 239 aa14.6□□□□□ -0.07
GABPB1-208ENST00000558970 NUP88Q99567 741 aaPredicted RBP14.6□□□□□ -0.07
GABPB1-208ENST00000558970 SH2D4AQ9H788 454 aa14.6□□□□□ -0.07
GABPB1-208ENST00000558970 KAT14Q9H8E8 782 aa14.6□□□□□ -0.07
GABPB1-208ENST00000558970 GOPCQ9HD26 462 aa14.6□□□□□ -0.07
GABPB1-208ENST00000558970 EMILIN3Q9NT22 766 aa14.6□□□□□ -0.07
GABPB1-208ENST00000558970 NAP1L2Q9ULW6 460 aaPredicted RBP14.6□□□□□ -0.07
GABPB1-208ENST00000558970 CYP46A1Q9Y6A2 500 aa14.6□□□□□ -0.07
GABPB1-208ENST00000558970 MANSC4A6NHS7 340 aaPredicted RBP14.59□□□□□ -0.07
GABPB1-208ENST00000558970 CXCL11O14625 94 aa14.59□□□□□ -0.07
GABPB1-208ENST00000558970 CETPP11597 493 aa14.59□□□□□ -0.07
GABPB1-208ENST00000558970 RPS6KB1P23443 525 aa14.59□□□□□ -0.07
GABPB1-208ENST00000558970 USP17L2Q6R6M4 530 aa14.59□□□□□ -0.07
GABPB1-208ENST00000558970 Q6ZUG5 572 aa14.59□□□□□ -0.07
GABPB1-208ENST00000558970 RUFY3Q7L099 469 aa14.59□□□□□ -0.07
GABPB1-208ENST00000558970 DHX32Q7L7V1 743 aaKnown RBP14.59□□□□□ -0.07
GABPB1-208ENST00000558970 LARP6Q9BRS8 491 aaKnown RBP14.59□□□□□ -0.07
GABPB1-208ENST00000558970 MYL10Q9BUA6 226 aa14.59□□□□□ -0.07
GABPB1-208ENST00000558970 TBC1D2Q9BYX2 928 aa14.59□□□□□ -0.07
GABPB1-208ENST00000558970 KIAA1683Q9H0B3 1180 aa14.59□□□□□ -0.07
GABPB1-208ENST00000558970 VCPKMTQ9H867 229 aa14.59□□□□□ -0.07
GABPB1-208ENST00000558970 TCP11L1Q9NUJ3 509 aa14.59□□□□□ -0.07
GABPB1-208ENST00000558970 TMX2Q9Y320 296 aa14.59□□□□□ -0.07
GABPB1-208ENST00000558970 SH2B2O14492 632 aaPredicted RBP14.58□□□□□ -0.08
GABPB1-208ENST00000558970 HMGB1P09429 215 aaKnown RBP14.58□□□□□ -0.08
GABPB1-208ENST00000558970 TOP1P11387 765 aaKnown RBP14.58□□□□□ -0.08
GABPB1-208ENST00000558970 USP14P54578 494 aa14.58□□□□□ -0.08
GABPB1-208ENST00000558970 ANAPC15P60006 121 aa14.58□□□□□ -0.08
GABPB1-208ENST00000558970 SEC23AQ15436 765 aa14.58□□□□□ -0.08
GABPB1-208ENST00000558970 CCDC96Q2M329 555 aa14.58□□□□□ -0.08
GABPB1-208ENST00000558970 SLFN13Q68D06 897 aa14.58□□□□□ -0.08
GABPB1-208ENST00000558970 FAM43AQ8N2R8 423 aa14.58□□□□□ -0.08
GABPB1-208ENST00000558970 PNMA1Q8ND90 353 aa14.58□□□□□ -0.08
GABPB1-208ENST00000558970 PTPN18Q99952 460 aa14.58□□□□□ -0.08
GABPB1-208ENST00000558970 TANGO6Q9C0B7 1094 aa14.58□□□□□ -0.08
GABPB1-208ENST00000558970 LY9Q9HBG7 655 aa14.58□□□□□ -0.08
GABPB1-208ENST00000558970 FRMPD2Q68DX3 1309 aaPredicted RBP14.58□□□□□ -0.08
GABPB1-208ENST00000558970 MYH6P13533 1939 aa14.58□□□□□ -0.08
GABPB1-208ENST00000558970 CCDC69A6NI79 296 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 C19orf81C9J6K1 198 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 BTBD19C9JJ37 291 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 F5H6K3 240 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 IGF2BP3O00425 579 aaKnown RBP eCLIP14.57□□□□□ -0.08
GABPB1-208ENST00000558970 SLC34A2O95436 690 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 NDUFB10O96000 172 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 VCAM1P19320 739 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 RXRAP19793 462 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 MAP2K2P36507 400 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 EXOSC10Q01780 885 aaKnown RBP14.57□□□□□ -0.08
GABPB1-208ENST00000558970 KLRC3Q07444 240 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 SREBF2Q12772 1141 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 MOGSQ13724 837 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 CCDC178Q5BJE1 867 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 PPP4R3BQ5MIZ7 849 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 FAM83BQ5T0W9 1011 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 DGKHQ86XP1 1220 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 CCDC144CPQ8IYA2 1237 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 IGDCC4Q8TDY8 1250 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 NUP133Q8WUM0 1156 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 BRF1Q92994 677 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 TMEM87BQ96K49 555 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 TBC1D32Q96NH3 1257 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 RPAP3Q9H6T3 665 aaPredicted RBP14.57□□□□□ -0.08
GABPB1-208ENST00000558970 ZSWIM6Q9HCJ5 1215 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 PDRG1Q9NUG6 133 aa14.57□□□□□ -0.08
GABPB1-208ENST00000558970 RLFQ13129 1914 aa14.56□□□□□ -0.08
GABPB1-208ENST00000558970 PDHXO00330 501 aa14.56□□□□□ -0.08
GABPB1-208ENST00000558970 GOLGA8HP0CJ92 632 aa14.56□□□□□ -0.08
GABPB1-208ENST00000558970 RBM25P49756 843 aaKnown RBP14.56□□□□□ -0.08
GABPB1-208ENST00000558970 RGS19P49795 217 aa14.56□□□□□ -0.08
GABPB1-208ENST00000558970 NEK4P51957 841 aa14.56□□□□□ -0.08
GABPB1-208ENST00000558970 APOBRQ0VD83 1088 aa14.56□□□□□ -0.08
GABPB1-208ENST00000558970 IKQ13123 557 aaPredicted RBP14.56□□□□□ -0.08
GABPB1-208ENST00000558970 SH3D19Q5HYK7 790 aa14.56□□□□□ -0.08
GABPB1-208ENST00000558970 GPAT2Q6NUI2 795 aa14.56□□□□□ -0.08
GABPB1-208ENST00000558970 KCTD1Q719H9 257 aa14.56□□□□□ -0.08
GABPB1-208ENST00000558970 FASTKD5Q7L8L6 764 aaKnown RBP14.56□□□□□ -0.08
GABPB1-208ENST00000558970 IFNL1Q8IU54 200 aa14.56□□□□□ -0.08
GABPB1-208ENST00000558970 PROCA1Q8NCQ7 364 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms