RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 LRRC3Q9BY71 257 aa8.4□□□□□ -1.06
LRRC28-209ENST00000558861 GINM1Q9NU53 330 aa8.4□□□□□ -1.06
LRRC28-209ENST00000558861 STK26Q9P289 416 aa8.4□□□□□ -1.06
LRRC28-209ENST00000558861 ARHGEF28Q8N1W1 1705 aaKnown RBP8.4□□□□□ -1.07
LRRC28-209ENST00000558861 DCDC2CA8MYV0 355 aa8.39□□□□□ -1.07
LRRC28-209ENST00000558861 ALX3O95076 343 aa8.39□□□□□ -1.07
LRRC28-209ENST00000558861 EXOSC6Q5RKV6 272 aaKnown RBP8.39□□□□□ -1.07
LRRC28-209ENST00000558861 NKD1Q969G9 470 aa8.39□□□□□ -1.07
LRRC28-209ENST00000558861 PRAM1Q96QH2 718 aa8.39□□□□□ -1.07
LRRC28-209ENST00000558861 RNF208Q9H0X6 261 aa8.39□□□□□ -1.07
LRRC28-209ENST00000558861 RAD18Q9NS91 495 aa8.39□□□□□ -1.07
LRRC28-209ENST00000558861 EFR3BQ9Y2G0 817 aa8.39□□□□□ -1.07
LRRC28-209ENST00000558861 CSADQ9Y600 493 aa8.39□□□□□ -1.07
LRRC28-209ENST00000558861 ADGRB2O60241 1585 aa8.39□□□□□ -1.07
LRRC28-209ENST00000558861 SBNO2Q9Y2G9 1366 aa8.38□□□□□ -1.07
LRRC28-209ENST00000558861 NALCNQ8IZF0 1738 aa8.38□□□□□ -1.07
LRRC28-209ENST00000558861 F8W735 103 aaPredicted RBP8.38□□□□□ -1.07
LRRC28-209ENST00000558861 IGSF3O75054 1194 aa8.38□□□□□ -1.07
LRRC28-209ENST00000558861 ATF4P18848 351 aaPredicted RBP8.38□□□□□ -1.07
LRRC28-209ENST00000558861 NASPP49321 788 aaPredicted RBP8.38□□□□□ -1.07
LRRC28-209ENST00000558861 ARID5AQ03989 594 aa8.38□□□□□ -1.07
LRRC28-209ENST00000558861 CWF19L2Q2TBE0 894 aaKnown RBP8.38□□□□□ -1.07
LRRC28-209ENST00000558861 NUTM2GQ5VZR2 741 aa8.38□□□□□ -1.07
LRRC28-209ENST00000558861 SLITRK4Q8IW52 837 aa8.38□□□□□ -1.07
LRRC28-209ENST00000558861 TANGO6Q9C0B7 1094 aa8.38□□□□□ -1.07
LRRC28-209ENST00000558861 C19orf44Q9H6X5 657 aa8.38□□□□□ -1.07
LRRC28-209ENST00000558861 PRKAG2Q9UGJ0 569 aa8.38□□□□□ -1.07
LRRC28-209ENST00000558861 USP21Q9UK80 565 aa8.38□□□□□ -1.07
LRRC28-209ENST00000558861 PPP1R9AQ9ULJ8 1098 aa8.38□□□□□ -1.07
LRRC28-209ENST00000558861 CDC42BPGQ6DT37 1551 aa8.38□□□□□ -1.07
LRRC28-209ENST00000558861 MST1RQ04912 1400 aa8.37□□□□□ -1.07
LRRC28-209ENST00000558861 MEGF11A6BM72 1044 aa8.37□□□□□ -1.07
LRRC28-209ENST00000558861 TMPRSS2O15393 492 aa8.37□□□□□ -1.07
LRRC28-209ENST00000558861 GRIN3BO60391 1043 aa8.37□□□□□ -1.07
LRRC28-209ENST00000558861 FGRP09769 529 aa8.37□□□□□ -1.07
LRRC28-209ENST00000558861 HNRNPUQ00839 825 aaKnown RBP eCLIP8.37□□□□□ -1.07
LRRC28-209ENST00000558861 ZC3H12AQ5D1E8 599 aaKnown RBP8.37□□□□□ -1.07
LRRC28-209ENST00000558861 MCF2L2Q86YR7 1114 aa8.37□□□□□ -1.07
LRRC28-209ENST00000558861 ELMO3Q96BJ8 720 aa8.37□□□□□ -1.07
LRRC28-209ENST00000558861 LENG1Q96BZ8 264 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-209ENST00000558861 TESK2Q96S53 571 aa8.37□□□□□ -1.07
LRRC28-209ENST00000558861 GMLQ99445 158 aa8.37□□□□□ -1.07
LRRC28-209ENST00000558861 BRMS1Q9HCU9 246 aa8.37□□□□□ -1.07
LRRC28-209ENST00000558861 USP35Q9P2H5 1018 aa8.37□□□□□ -1.07
LRRC28-209ENST00000558861 AP4E1Q9UPM8 1137 aa8.37□□□□□ -1.07
LRRC28-209ENST00000558861 POLR3KQ9Y2Y1 108 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-209ENST00000558861 GFRA2O00451 464 aa8.36□□□□□ -1.07
LRRC28-209ENST00000558861 ADH5P11766 374 aa8.36□□□□□ -1.07
LRRC28-209ENST00000558861 DRD2P14416 443 aa8.36□□□□□ -1.07
LRRC28-209ENST00000558861 ID3Q02535 119 aa8.36□□□□□ -1.07
LRRC28-209ENST00000558861 DIEXFQ68CQ4 756 aaKnown RBP8.36□□□□□ -1.07
LRRC28-209ENST00000558861 C12orf40Q86WS4 652 aa8.36□□□□□ -1.07
LRRC28-209ENST00000558861 VPS37DQ86XT2 251 aa8.36□□□□□ -1.07
LRRC28-209ENST00000558861 TMEM130Q8N3G9 435 aa8.36□□□□□ -1.07
LRRC28-209ENST00000558861 SMG8Q8ND04 991 aaKnown RBP8.36□□□□□ -1.07
LRRC28-209ENST00000558861 SPATA32Q96LK8 384 aa8.36□□□□□ -1.07
LRRC28-209ENST00000558861 CARD11Q9BXL7 1154 aa8.36□□□□□ -1.07
LRRC28-209ENST00000558861 AKTIPQ9H8T0 292 aa8.36□□□□□ -1.07
LRRC28-209ENST00000558861 SUGCTQ9HAC7 445 aa8.36□□□□□ -1.07
LRRC28-209ENST00000558861 MSH6P52701 1360 aa8.35□□□□□ -1.07
LRRC28-209ENST00000558861 USP47Q96K76 1375 aa8.35□□□□□ -1.07
LRRC28-209ENST00000558861 PRR36Q9H6K5 1346 aa8.35□□□□□ -1.07
LRRC28-209ENST00000558861 CENPJQ9HC77 1338 aaPredicted RBP8.35□□□□□ -1.07
LRRC28-209ENST00000558861 TULP4Q9NRJ4 1543 aa8.35□□□□□ -1.07
LRRC28-209ENST00000558861 PRAMEF27A3QJZ7 478 aa8.35□□□□□ -1.07
LRRC28-209ENST00000558861 APBA3O96018 575 aa8.35□□□□□ -1.07
LRRC28-209ENST00000558861 SLFN14P0C7P3 912 aa8.35□□□□□ -1.07
LRRC28-209ENST00000558861 MCM4P33991 863 aa8.35□□□□□ -1.07
LRRC28-209ENST00000558861 SOX9P48436 509 aa8.35□□□□□ -1.07
LRRC28-209ENST00000558861 SF3A1Q15459 793 aaKnown RBP8.35□□□□□ -1.07
LRRC28-209ENST00000558861 FDX2Q6P4F2 183 aa8.35□□□□□ -1.07
LRRC28-209ENST00000558861 HDXQ7Z353 690 aa8.35□□□□□ -1.07
LRRC28-209ENST00000558861 SEC16BQ96JE7 1060 aa8.35□□□□□ -1.07
LRRC28-209ENST00000558861 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.35□□□□□ -1.07
LRRC28-209ENST00000558861 CYP4F12Q9HCS2 524 aa8.35□□□□□ -1.07
LRRC28-209ENST00000558861 PPP1R1BQ9UD71 204 aaPredicted RBP8.35□□□□□ -1.07
LRRC28-209ENST00000558861 PPT2Q9UMR5 302 aa8.35□□□□□ -1.07
LRRC28-209ENST00000558861 SYNGAP1Q96PV0 1343 aa8.34□□□□□ -1.07
LRRC28-209ENST00000558861 C1orf167Q5SNV9 1468 aa8.34□□□□□ -1.07
LRRC28-209ENST00000558861 FAM181BA6NEQ2 426 aa8.34□□□□□ -1.07
LRRC28-209ENST00000558861 TIAF1O95411 115 aa8.34□□□□□ -1.07
LRRC28-209ENST00000558861 PREPP48147 710 aa8.34□□□□□ -1.07
LRRC28-209ENST00000558861 SAFB2Q14151 953 aaKnown RBP eCLIP8.34□□□□□ -1.07
LRRC28-209ENST00000558861 PPM1JQ5JR12 505 aa8.34□□□□□ -1.07
LRRC28-209ENST00000558861 CCDC81Q6ZN84 652 aa8.34□□□□□ -1.07
LRRC28-209ENST00000558861 GK5Q6ZS86 529 aa8.34□□□□□ -1.07
LRRC28-209ENST00000558861 CYFIP1Q7L576 1253 aa8.34□□□□□ -1.07
LRRC28-209ENST00000558861 NACC1Q96RE7 527 aa8.34□□□□□ -1.07
LRRC28-209ENST00000558861 CRIM1Q9NZV1 1036 aa8.34□□□□□ -1.07
LRRC28-209ENST00000558861 HIF3AQ9Y2N7 669 aa8.34□□□□□ -1.07
LRRC28-209ENST00000558861 CORINQ9Y5Q5 1042 aa8.34□□□□□ -1.07
LRRC28-209ENST00000558861 SNCAIPQ9Y6H5 919 aa8.34□□□□□ -1.07
LRRC28-209ENST00000558861 ATP7BP35670 1465 aa8.33□□□□□ -1.08
LRRC28-209ENST00000558861 USP32Q8NFA0 1604 aa8.33□□□□□ -1.08
LRRC28-209ENST00000558861 ST20-MTHFSA0A0A6YYL1 179 aa8.33□□□□□ -1.08
LRRC28-209ENST00000558861 GLB1P16278 677 aa8.33□□□□□ -1.08
LRRC28-209ENST00000558861 NOS3P29474 1203 aa8.33□□□□□ -1.08
LRRC28-209ENST00000558861 IREB2P48200 963 aaKnown RBP8.33□□□□□ -1.08
LRRC28-209ENST00000558861 ERVK-24P63145 666 aa8.33□□□□□ -1.08
LRRC28-209ENST00000558861 CLCQ05315 142 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms