RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 KIF22Q14807 665 aa12.09□□□□□ -0.47
SPG11-212ENST00000558790 PUM3Q15397 648 aaKnown RBP12.09□□□□□ -0.47
SPG11-212ENST00000558790 DCAF15Q66K64 600 aa12.09□□□□□ -0.47
SPG11-212ENST00000558790 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.09□□□□□ -0.47
SPG11-212ENST00000558790 HOOK2Q96ED9 719 aa12.09□□□□□ -0.47
SPG11-212ENST00000558790 ARID3AQ99856 593 aa12.09□□□□□ -0.47
SPG11-212ENST00000558790 WNT7AO00755 349 aa12.08□□□□□ -0.48
SPG11-212ENST00000558790 FGFR2P21802 821 aa12.08□□□□□ -0.48
SPG11-212ENST00000558790 SOX11P35716 441 aa12.08□□□□□ -0.48
SPG11-212ENST00000558790 ARID5BQ14865 1188 aa12.08□□□□□ -0.48
SPG11-212ENST00000558790 MIGA2Q7L4E1 593 aa12.08□□□□□ -0.48
SPG11-212ENST00000558790 CCDC82Q8N4S0 544 aa12.08□□□□□ -0.48
SPG11-212ENST00000558790 FAM174AQ8TBP5 190 aa12.08□□□□□ -0.48
SPG11-212ENST00000558790 ZNF341Q9BYN7 854 aa12.08□□□□□ -0.48
SPG11-212ENST00000558790 CPA4Q9UI42 421 aa12.08□□□□□ -0.48
SPG11-212ENST00000558790 SUGT1Q9Y2Z0 365 aa12.08□□□□□ -0.48
SPG11-212ENST00000558790 ZNF521Q96K83 1311 aa12.08□□□□□ -0.48
SPG11-212ENST00000558790 A0A1W2PPC1 479 aa12.07□□□□□ -0.48
SPG11-212ENST00000558790 GNRH1P01148 92 aa12.07□□□□□ -0.48
SPG11-212ENST00000558790 PPATQ06203 517 aa12.07□□□□□ -0.48
SPG11-212ENST00000558790 HHIPL2Q6UWX4 724 aa12.07□□□□□ -0.48
SPG11-212ENST00000558790 C17orf99Q6UX52 265 aa12.07□□□□□ -0.48
SPG11-212ENST00000558790 TRIM47Q96LD4 638 aa12.07□□□□□ -0.48
SPG11-212ENST00000558790 MRIQ9BWK5 157 aa12.07□□□□□ -0.48
SPG11-212ENST00000558790 PKD2L1Q9P0L9 805 aa12.07□□□□□ -0.48
SPG11-212ENST00000558790 DAGLAQ9Y4D2 1042 aa12.07□□□□□ -0.48
SPG11-212ENST00000558790 RFX7Q2KHR2 1363 aa12.06□□□□□ -0.48
SPG11-212ENST00000558790 ATRNL1Q5VV63 1379 aa12.06□□□□□ -0.48
SPG11-212ENST00000558790 PDHXO00330 501 aa12.06□□□□□ -0.48
SPG11-212ENST00000558790 ANP32CO43423 234 aa12.06□□□□□ -0.48
SPG11-212ENST00000558790 IFIT1P09914 478 aaKnown RBP12.06□□□□□ -0.48
SPG11-212ENST00000558790 PSMC4P43686 418 aa12.06□□□□□ -0.48
SPG11-212ENST00000558790 PRMT2P55345 433 aa12.06□□□□□ -0.48
SPG11-212ENST00000558790 TCP10Q12799 353 aa12.06□□□□□ -0.48
SPG11-212ENST00000558790 NFIAQ12857 509 aa12.06□□□□□ -0.48
SPG11-212ENST00000558790 MOGSQ13724 837 aa12.06□□□□□ -0.48
SPG11-212ENST00000558790 ANKRD23Q86SG2 305 aa12.06□□□□□ -0.48
SPG11-212ENST00000558790 TRMT44Q8IYL2 757 aaKnown RBP12.06□□□□□ -0.48
SPG11-212ENST00000558790 FAM151AQ8WW52 585 aa12.06□□□□□ -0.48
SPG11-212ENST00000558790 SRRDQ9UH36 339 aa12.06□□□□□ -0.48
SPG11-212ENST00000558790 KCNH4Q9UQ05 1017 aa12.06□□□□□ -0.48
SPG11-212ENST00000558790 FOCADQ5VW36 1801 aa12.06□□□□□ -0.48
SPG11-212ENST00000558790 PTPRCP08575 1304 aa12.06□□□□□ -0.48
SPG11-212ENST00000558790 MAST2Q6P0Q8 1798 aa12.05□□□□□ -0.48
SPG11-212ENST00000558790 SIPA1L1O43166 1804 aa12.05□□□□□ -0.48
SPG11-212ENST00000558790 TNFRSF10AO00220 468 aa12.05□□□□□ -0.48
SPG11-212ENST00000558790 PIK3CDO00329 1044 aa12.05□□□□□ -0.48
SPG11-212ENST00000558790 SLC5A1P13866 664 aa12.05□□□□□ -0.48
SPG11-212ENST00000558790 PRDX5P30044 214 aa12.05□□□□□ -0.48
SPG11-212ENST00000558790 RFX5P48382 616 aaPredicted RBP12.05□□□□□ -0.48
SPG11-212ENST00000558790 NOL9Q5SY16 702 aaKnown RBP12.05□□□□□ -0.48
SPG11-212ENST00000558790 CDC42EP5Q6NZY7 148 aa12.05□□□□□ -0.48
SPG11-212ENST00000558790 FAM9BQ8IZU0 186 aa12.05□□□□□ -0.48
SPG11-212ENST00000558790 WDR66Q8TBY9 1149 aa12.05□□□□□ -0.48
SPG11-212ENST00000558790 UCN2Q96RP3 112 aa12.05□□□□□ -0.48
SPG11-212ENST00000558790 USP44Q9H0E7 712 aa12.05□□□□□ -0.48
SPG11-212ENST00000558790 ZNF112Q9UJU3 913 aa12.05□□□□□ -0.48
SPG11-212ENST00000558790 MYO5AQ9Y4I1 1855 aaKnown RBP12.05□□□□□ -0.48
SPG11-212ENST00000558790 MYPNQ86TC9 1320 aa12.05□□□□□ -0.48
SPG11-212ENST00000558790 PLXNB2O15031 1838 aa12.04□□□□□ -0.48
SPG11-212ENST00000558790 EYA2O00167 538 aa12.04□□□□□ -0.48
SPG11-212ENST00000558790 SIAH2O43255 324 aa12.04□□□□□ -0.48
SPG11-212ENST00000558790 ATG9AQ7Z3C6 839 aa12.04□□□□□ -0.48
SPG11-212ENST00000558790 RAET1EQ8TD07 263 aa12.04□□□□□ -0.48
SPG11-212ENST00000558790 LPIN2Q92539 896 aa12.04□□□□□ -0.48
SPG11-212ENST00000558790 CEP126Q9P2H0 1117 aa12.04□□□□□ -0.48
SPG11-212ENST00000558790 NR2E3Q9Y5X4 410 aa12.04□□□□□ -0.48
SPG11-212ENST00000558790 BDP1A6H8Y1 2624 aa12.03□□□□□ -0.48
SPG11-212ENST00000558790 CYP2C8P10632 490 aa12.03□□□□□ -0.48
SPG11-212ENST00000558790 GRK4P32298 578 aa12.03□□□□□ -0.48
SPG11-212ENST00000558790 ZEB1P37275 1124 aaPredicted RBP12.03□□□□□ -0.48
SPG11-212ENST00000558790 RAB15P59190 212 aa12.03□□□□□ -0.48
SPG11-212ENST00000558790 PRKCZQ05513 592 aa12.03□□□□□ -0.48
SPG11-212ENST00000558790 VASH1Q7L8A9 365 aaPredicted RBP12.03□□□□□ -0.48
SPG11-212ENST00000558790 SSH1Q8WYL5 1049 aa12.03□□□□□ -0.48
SPG11-212ENST00000558790 CCDC97Q96F63 343 aaPredicted RBP12.03□□□□□ -0.48
SPG11-212ENST00000558790 PARK7Q99497 189 aaKnown RBP12.03□□□□□ -0.48
SPG11-212ENST00000558790 DDX60LQ5H9U9 1706 aaKnown RBP12.03□□□□□ -0.48
SPG11-212ENST00000558790 FRMPD3Q5JV73 1810 aa12.02□□□□□ -0.48
SPG11-212ENST00000558790 LDHBP07195 334 aaKnown RBP12.02□□□□□ -0.49
SPG11-212ENST00000558790 BCRP11274 1271 aa12.02□□□□□ -0.49
SPG11-212ENST00000558790 CCL5P13501 91 aa12.02□□□□□ -0.49
SPG11-212ENST00000558790 GJA8P48165 433 aa12.02□□□□□ -0.49
SPG11-212ENST00000558790 ATP2B3Q16720 1220 aa12.02□□□□□ -0.49
SPG11-212ENST00000558790 GPAT2Q6NUI2 795 aa12.02□□□□□ -0.49
SPG11-212ENST00000558790 TRIM67Q6ZTA4 783 aa12.02□□□□□ -0.49
SPG11-212ENST00000558790 ZFPM1Q8IX07 1006 aa12.02□□□□□ -0.49
SPG11-212ENST00000558790 GUCD1Q96NT3 240 aa12.02□□□□□ -0.49
SPG11-212ENST00000558790 HTATIP2Q9BUP3 242 aa12.02□□□□□ -0.49
SPG11-212ENST00000558790 SIL1Q9H173 461 aa12.02□□□□□ -0.49
SPG11-212ENST00000558790 SALL1Q9NSC2 1324 aa12.02□□□□□ -0.49
SPG11-212ENST00000558790 HOXD10P28358 340 aa12.01□□□□□ -0.49
SPG11-212ENST00000558790 PHKA1P46020 1223 aa12.01□□□□□ -0.49
SPG11-212ENST00000558790 KCTD15Q96SI1 283 aaPredicted RBP12.01□□□□□ -0.49
SPG11-212ENST00000558790 GDF15Q99988 308 aa12.01□□□□□ -0.49
SPG11-212ENST00000558790 USP40Q9NVE5 1235 aa12.01□□□□□ -0.49
SPG11-212ENST00000558790 GABRQQ9UN88 632 aa12.01□□□□□ -0.49
SPG11-212ENST00000558790 A0A0G2JLL6 359 aaPredicted RBP12□□□□□ -0.49
SPG11-212ENST00000558790 PHF20L1A8MW92 1017 aa12□□□□□ -0.49
SPG11-212ENST00000558790 GDF9O60383 454 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms