RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ZNF396Q96N95 335 aaPredicted RBP15□□□□□ -0.01
SMAD3-207ENST00000558763 RBSNQ9H1K0 784 aa15□□□□□ -0.01
SMAD3-207ENST00000558763 ADARB2Q9NS39 739 aaKnown RBP15□□□□□ -0.01
SMAD3-207ENST00000558763 POLR3EQ9NVU0 708 aa15□□□□□ -0.01
SMAD3-207ENST00000558763 RBM28Q9NW13 759 aaKnown RBP15□□□□□ -0.01
SMAD3-207ENST00000558763 HACL1Q9UJ83 578 aa15□□□□□ -0.01
SMAD3-207ENST00000558763 PLIN4Q96Q06 1357 aa15□□□□□ -0.01
SMAD3-207ENST00000558763 MMP1P03956 469 aa15□□□□□ -0.01
SMAD3-207ENST00000558763 NOVP48745 357 aa15□□□□□ -0.01
SMAD3-207ENST00000558763 TRIM22Q8IYM9 498 aa15□□□□□ -0.01
SMAD3-207ENST00000558763 LINC00301Q8NCQ3 95 aa15□□□□□ -0.01
SMAD3-207ENST00000558763 FUCA2Q9BTY2 467 aa15□□□□□ -0.01
SMAD3-207ENST00000558763 MKNK2Q9HBH9 465 aa15□□□□□ -0.01
SMAD3-207ENST00000558763 FAM198AQ9UFP1 575 aa15□□□□□ -0.01
SMAD3-207ENST00000558763 CLIC4Q9Y696 253 aa15□□□□□ -0.01
SMAD3-207ENST00000558763 HIRAP54198 1017 aaPredicted RBP14.99□□□□□ -0.01
SMAD3-207ENST00000558763 ZFPM1Q8IX07 1006 aa14.99□□□□□ -0.01
SMAD3-207ENST00000558763 SRBD1Q8N5C6 995 aaKnown RBP14.99□□□□□ -0.01
SMAD3-207ENST00000558763 ZNF526Q8TF50 670 aaPredicted RBP14.99□□□□□ -0.01
SMAD3-207ENST00000558763 WASF1Q92558 559 aa14.99□□□□□ -0.01
SMAD3-207ENST00000558763 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.99□□□□□ -0.01
SMAD3-207ENST00000558763 IDI2Q9BXS1 227 aa14.99□□□□□ -0.01
SMAD3-207ENST00000558763 OSBPL5Q9H0X9 879 aaPredicted RBP14.99□□□□□ -0.01
SMAD3-207ENST00000558763 WDR90Q96KV7 1748 aa14.99□□□□□ -0.01
SMAD3-207ENST00000558763 PRPF3O43395 683 aaKnown RBP14.98□□□□□ -0.01
SMAD3-207ENST00000558763 SLC35G1Q2M3R5 365 aa14.98□□□□□ -0.01
SMAD3-207ENST00000558763 NEDD1Q8NHV4 660 aa14.98□□□□□ -0.01
SMAD3-207ENST00000558763 KCNJ14Q9UNX9 436 aa14.98□□□□□ -0.01
SMAD3-207ENST00000558763 SCN4AP35499 1836 aa14.98□□□□□ -0.01
SMAD3-207ENST00000558763 YEATS4O95619 227 aa14.98□□□□□ -0.01
SMAD3-207ENST00000558763 TSPY3P0CV98 308 aa14.98□□□□□ -0.01
SMAD3-207ENST00000558763 TSPY8P0CW00 308 aa14.98□□□□□ -0.01
SMAD3-207ENST00000558763 EPHX2P34913 555 aa14.98□□□□□ -0.01
SMAD3-207ENST00000558763 ANGEL2Q5VTE6 544 aaKnown RBP14.98□□□□□ -0.01
SMAD3-207ENST00000558763 ZSCAN29Q8IWY8 852 aaPredicted RBP14.98□□□□□ -0.01
SMAD3-207ENST00000558763 PNMA1Q8ND90 353 aa14.98□□□□□ -0.01
SMAD3-207ENST00000558763 MAP3K14Q99558 947 aa14.98□□□□□ -0.01
SMAD3-207ENST00000558763 GOLPH3LQ9H4A5 285 aa14.98□□□□□ -0.01
SMAD3-207ENST00000558763 GGA3Q9NZ52 723 aa14.98□□□□□ -0.01
SMAD3-207ENST00000558763 IQCA1LA6NCM1 817 aa14.97□□□□□ -0.01
SMAD3-207ENST00000558763 NR1I2O75469 434 aa14.97□□□□□ -0.01
SMAD3-207ENST00000558763 NPY5RQ15761 445 aa14.97□□□□□ -0.01
SMAD3-207ENST00000558763 RBM43Q6ZSC3 357 aaKnown RBP14.97□□□□□ -0.01
SMAD3-207ENST00000558763 ZNF444Q8N0Y2 327 aaPredicted RBP14.97□□□□□ -0.01
SMAD3-207ENST00000558763 DACT1Q9NYF0 836 aa14.97□□□□□ -0.01
SMAD3-207ENST00000558763 PCDHA7Q9UN72 937 aa14.97□□□□□ -0.01
SMAD3-207ENST00000558763 CNTNAP1P78357 1384 aa14.97□□□□□ -0.01
SMAD3-207ENST00000558763 hCG_1642624A0A1W2PR95 340 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 POTECB2RU33 542 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 BTBD18B2RXH4 712 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 GRM4Q14833 912 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 PTPAQ15257 358 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 DIS3L2Q8IYB7 885 aaKnown RBP14.96□□□□□ -0.01
SMAD3-207ENST00000558763 TMEM47Q9BQJ4 181 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 IGKV6D-41A0A0C4DH26 115 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 DDTLA6NHG4 134 aaPredicted RBP14.96□□□□□ -0.01
SMAD3-207ENST00000558763 ENTPD3O75355 529 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 VEGFAP15692 232 aaPredicted RBP14.96□□□□□ -0.01
SMAD3-207ENST00000558763 SNW1Q13573 536 aaKnown RBP14.96□□□□□ -0.01
SMAD3-207ENST00000558763 EAPPQ56P03 285 aaPredicted RBP14.96□□□□□ -0.01
SMAD3-207ENST00000558763 CCDC178Q5BJE1 867 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 ANO1Q5XXA6 986 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 RASGRP2Q7LDG7 609 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 NOSTRINQ8IVI9 506 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 STAG2Q8N3U4 1231 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 ENGASEQ8NFI3 743 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 CTCFLQ8NI51 663 aaPredicted RBP14.96□□□□□ -0.01
SMAD3-207ENST00000558763 OXER1Q8TDS5 423 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 TMEM39BQ9GZU3 492 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 TAF1DQ9H5J8 278 aaPredicted RBP14.96□□□□□ -0.01
SMAD3-207ENST00000558763 KAT14Q9H8E8 782 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 ZNF287Q9HBT7 754 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 MAD2L2Q9UI95 211 aa14.96□□□□□ -0.01
SMAD3-207ENST00000558763 V9GY48 417 aaPredicted RBP14.96□□□□□ -0.01
SMAD3-207ENST00000558763 TOB1P50616 345 aaPredicted RBP14.95□□□□□ -0.02
SMAD3-207ENST00000558763 TRIM29Q14134 588 aa14.95□□□□□ -0.02
SMAD3-207ENST00000558763 AXDND1Q5T1B0 1012 aaPredicted RBP14.95□□□□□ -0.02
SMAD3-207ENST00000558763 SH3BP5LQ7L8J4 393 aa14.95□□□□□ -0.02
SMAD3-207ENST00000558763 CDAN1Q8IWY9 1227 aa14.95□□□□□ -0.02
SMAD3-207ENST00000558763 BICD2Q8TD16 824 aa14.95□□□□□ -0.02
SMAD3-207ENST00000558763 CEP95Q96GE4 821 aa14.95□□□□□ -0.02
SMAD3-207ENST00000558763 PHF20Q9BVI0 1012 aa14.95□□□□□ -0.02
SMAD3-207ENST00000558763 FOXP1Q9H334 677 aaPredicted RBP14.95□□□□□ -0.02
SMAD3-207ENST00000558763 DNAJC18Q9H819 358 aa14.95□□□□□ -0.02
SMAD3-207ENST00000558763 DDX19AQ9NUU7 478 aaKnown RBP14.95□□□□□ -0.02
SMAD3-207ENST00000558763 VPS54Q9P1Q0 977 aa14.95□□□□□ -0.02
SMAD3-207ENST00000558763 GOLGA6L4A6NEF3 574 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 LETM1O95202 739 aaPredicted RBP14.94□□□□□ -0.02
SMAD3-207ENST00000558763 SHMT1P34896 483 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 TNNI2P48788 182 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 NR5A1Q13285 461 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 RASA3Q14644 834 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 FKBP1CQ5VVH2 108 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 USP50Q70EL3 339 aaPredicted RBP14.94□□□□□ -0.02
SMAD3-207ENST00000558763 KCNG4Q8TDN1 519 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 FAM151AQ8WW52 585 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 TSPY26PQ9H489 355 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 CLSTN2Q9H4D0 955 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 RRAGCQ9HB90 399 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 TAOK2Q9UL54 1235 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms