RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 USP17L18D6R9N7 530 aa16.42■□□□□ 0.22
TSPAN3-205ENST00000558745 USP17L22D6RA61 530 aa16.42■□□□□ 0.22
TSPAN3-205ENST00000558745 USP17L17D6RBQ6 530 aa16.42■□□□□ 0.22
TSPAN3-205ENST00000558745 USP17L19D6RCP7 530 aa16.42■□□□□ 0.22
TSPAN3-205ENST00000558745 USP17L20D6RJB6 530 aa16.42■□□□□ 0.22
TSPAN3-205ENST00000558745 RANBP6O60518 1105 aaKnown RBP16.42■□□□□ 0.22
TSPAN3-205ENST00000558745 TSPY3P0CV98 308 aa16.42■□□□□ 0.22
TSPAN3-205ENST00000558745 TSPY8P0CW00 308 aa16.42■□□□□ 0.22
TSPAN3-205ENST00000558745 USP17L24Q0WX57 530 aa16.42■□□□□ 0.22
TSPAN3-205ENST00000558745 Q3C1V9 767 aa16.42■□□□□ 0.22
TSPAN3-205ENST00000558745 NEDD1Q8NHV4 660 aa16.42■□□□□ 0.22
TSPAN3-205ENST00000558745 ZNF287Q9HBT7 754 aa16.42■□□□□ 0.22
TSPAN3-205ENST00000558745 RBPJLQ9UBG7 517 aa16.42■□□□□ 0.22
TSPAN3-205ENST00000558745 FGRP09769 529 aa16.41■□□□□ 0.22
TSPAN3-205ENST00000558745 PSMC4P43686 418 aa16.41■□□□□ 0.22
TSPAN3-205ENST00000558745 HERVK_113P62684 666 aa16.41■□□□□ 0.22
TSPAN3-205ENST00000558745 SAMD1Q6SPF0 538 aaPredicted RBP16.41■□□□□ 0.22
TSPAN3-205ENST00000558745 TRIM47Q96LD4 638 aa16.41■□□□□ 0.22
TSPAN3-205ENST00000558745 DSCC1Q9BVC3 393 aa16.41■□□□□ 0.22
TSPAN3-205ENST00000558745 VCPKMTQ9H867 229 aa16.41■□□□□ 0.22
TSPAN3-205ENST00000558745 IL17RBQ9NRM6 502 aa16.41■□□□□ 0.22
TSPAN3-205ENST00000558745 MTMR4Q9NYA4 1195 aa16.41■□□□□ 0.22
TSPAN3-205ENST00000558745 TSPY2A6NKD2 308 aa16.4■□□□□ 0.22
TSPAN3-205ENST00000558745 ZNF213O14771 459 aa16.4■□□□□ 0.22
TSPAN3-205ENST00000558745 SGSM2O43147 1006 aa16.4■□□□□ 0.22
TSPAN3-205ENST00000558745 FMNL1O95466 1100 aaPredicted RBP16.4■□□□□ 0.22
TSPAN3-205ENST00000558745 LRRC47Q8N1G4 583 aaKnown RBP16.4■□□□□ 0.22
TSPAN3-205ENST00000558745 RUFY2Q8WXA3 655 aa16.4■□□□□ 0.22
TSPAN3-205ENST00000558745 NUP88Q99567 741 aaPredicted RBP16.4■□□□□ 0.22
TSPAN3-205ENST00000558745 PAGR1Q9BTK6 254 aa16.4■□□□□ 0.22
TSPAN3-205ENST00000558745 NYAP2Q9P242 653 aa16.4■□□□□ 0.22
TSPAN3-205ENST00000558745 ZMYM6O95789 1325 aa16.39■□□□□ 0.21
TSPAN3-205ENST00000558745 ORC4O43929 436 aa16.39■□□□□ 0.21
TSPAN3-205ENST00000558745 KIF22Q14807 665 aa16.39■□□□□ 0.21
TSPAN3-205ENST00000558745 BMP2KLQ5H9B9 411 aa16.39■□□□□ 0.21
TSPAN3-205ENST00000558745 AKNAD1Q5T1N1 836 aa16.39■□□□□ 0.21
TSPAN3-205ENST00000558745 TANGO6Q9C0B7 1094 aa16.39■□□□□ 0.21
TSPAN3-205ENST00000558745 HPS5Q9UPZ3 1129 aa16.39■□□□□ 0.21
TSPAN3-205ENST00000558745 PTPN22Q9Y2R2 807 aa16.39■□□□□ 0.21
TSPAN3-205ENST00000558745 GREB1LQ9C091 1923 aaPredicted RBP16.39■□□□□ 0.21
TSPAN3-205ENST00000558745 NEDD4P46934 1319 aa16.38■□□□□ 0.21
TSPAN3-205ENST00000558745 F5H6K3 240 aa16.38■□□□□ 0.21
TSPAN3-205ENST00000558745 CNMDO75829 334 aa16.38■□□□□ 0.21
TSPAN3-205ENST00000558745 GCLCP48506 637 aaPredicted RBP16.38■□□□□ 0.21
TSPAN3-205ENST00000558745 KLRC3Q07444 240 aa16.38■□□□□ 0.21
TSPAN3-205ENST00000558745 FAM83BQ5T0W9 1011 aa16.38■□□□□ 0.21
TSPAN3-205ENST00000558745 FBXO46Q6PJ61 603 aaPredicted RBP16.38■□□□□ 0.21
TSPAN3-205ENST00000558745 MFSD6Q6ZSS7 791 aa16.38■□□□□ 0.21
TSPAN3-205ENST00000558745 STAG1Q8WVM7 1258 aa16.38■□□□□ 0.21
TSPAN3-205ENST00000558745 SH2D4AQ9H788 454 aa16.38■□□□□ 0.21
TSPAN3-205ENST00000558745 FBXO28Q9NVF7 368 aa16.38■□□□□ 0.21
TSPAN3-205ENST00000558745 GABRQQ9UN88 632 aa16.38■□□□□ 0.21
TSPAN3-205ENST00000558745 PTCH2Q9Y6C5 1203 aa16.38■□□□□ 0.21
TSPAN3-205ENST00000558745 TAF6LQ9Y6J9 622 aa16.38■□□□□ 0.21
TSPAN3-205ENST00000558745 RAD50Q92878 1312 aa16.37■□□□□ 0.21
TSPAN3-205ENST00000558745 SPDYE16A6NNV3 312 aaPredicted RBP16.37■□□□□ 0.21
TSPAN3-205ENST00000558745 TTLL1O95922 423 aa16.37■□□□□ 0.21
TSPAN3-205ENST00000558745 NDUFB10O96000 172 aa16.37■□□□□ 0.21
TSPAN3-205ENST00000558745 COG2Q14746 738 aa16.37■□□□□ 0.21
TSPAN3-205ENST00000558745 FAM110CQ1W6H9 321 aa16.37■□□□□ 0.21
TSPAN3-205ENST00000558745 ERICH6BQ5W0A0 696 aa16.37■□□□□ 0.21
TSPAN3-205ENST00000558745 MKL1Q969V6 931 aa16.37■□□□□ 0.21
TSPAN3-205ENST00000558745 ZKSCAN3Q9BRR0 538 aa16.37■□□□□ 0.21
TSPAN3-205ENST00000558745 ESYT1Q9BSJ8 1104 aa16.37■□□□□ 0.21
TSPAN3-205ENST00000558745 BTBD7Q9P203 1132 aa16.37■□□□□ 0.21
TSPAN3-205ENST00000558745 STX8Q9UNK0 236 aa16.37■□□□□ 0.21
TSPAN3-205ENST00000558745 FLOT1O75955 427 aa16.36■□□□□ 0.21
TSPAN3-205ENST00000558745 DSG3P32926 999 aa16.36■□□□□ 0.21
TSPAN3-205ENST00000558745 FCGRTP55899 365 aa16.36■□□□□ 0.21
TSPAN3-205ENST00000558745 PKN2Q16513 984 aaKnown RBP16.36■□□□□ 0.21
TSPAN3-205ENST00000558745 IMMTQ16891 758 aaKnown RBP16.36■□□□□ 0.21
TSPAN3-205ENST00000558745 RASGRP2Q7LDG7 609 aa16.36■□□□□ 0.21
TSPAN3-205ENST00000558745 GPRC5AQ8NFJ5 357 aa16.36■□□□□ 0.21
TSPAN3-205ENST00000558745 LPAR1Q92633 364 aa16.36■□□□□ 0.21
TSPAN3-205ENST00000558745 GOPCQ9HD26 462 aa16.36■□□□□ 0.21
TSPAN3-205ENST00000558745 MORF4L1Q9UBU8 362 aa16.36■□□□□ 0.21
TSPAN3-205ENST00000558745 CTNNA3Q9UI47 895 aa16.36■□□□□ 0.21
TSPAN3-205ENST00000558745 MTMR7Q9Y216 660 aa16.36■□□□□ 0.21
TSPAN3-205ENST00000558745 B4E1Z4 1266 aa16.35■□□□□ 0.21
TSPAN3-205ENST00000558745 WDR46O15213 610 aaKnown RBP16.35■□□□□ 0.21
TSPAN3-205ENST00000558745 KDM4AO75164 1064 aa16.35■□□□□ 0.21
TSPAN3-205ENST00000558745 CYP21A2P08686 494 aa16.35■□□□□ 0.21
TSPAN3-205ENST00000558745 ERVK-9P63128 1117 aa16.35■□□□□ 0.21
TSPAN3-205ENST00000558745 ERVK-24P63145 666 aa16.35■□□□□ 0.21
TSPAN3-205ENST00000558745 PRKCZQ05513 592 aa16.35■□□□□ 0.21
TSPAN3-205ENST00000558745 SLFN13Q68D06 897 aa16.35■□□□□ 0.21
TSPAN3-205ENST00000558745 ATG4CQ96DT6 458 aa16.35■□□□□ 0.21
TSPAN3-205ENST00000558745 LSG1Q9H089 658 aaKnown RBP16.35■□□□□ 0.21
TSPAN3-205ENST00000558745 PORCNQ9H237 461 aa16.35■□□□□ 0.21
TSPAN3-205ENST00000558745 SRRDQ9UH36 339 aa16.35■□□□□ 0.21
TSPAN3-205ENST00000558745 PLIN4Q96Q06 1357 aa16.35■□□□□ 0.21
TSPAN3-205ENST00000558745 DOCK3Q8IZD9 2030 aa16.35■□□□□ 0.21
TSPAN3-205ENST00000558745 TNPO2O14787 897 aaKnown RBP16.34■□□□□ 0.21
TSPAN3-205ENST00000558745 ARHGEF6Q15052 776 aa16.34■□□□□ 0.21
TSPAN3-205ENST00000558745 MAP4K1Q92918 833 aa16.34■□□□□ 0.21
TSPAN3-205ENST00000558745 RNF41Q9H4P4 317 aaPredicted RBP16.34■□□□□ 0.21
TSPAN3-205ENST00000558745 HOXC10Q9NYD6 342 aa16.34■□□□□ 0.21
TSPAN3-205ENST00000558745 MYPNQ86TC9 1320 aa16.33■□□□□ 0.21
TSPAN3-205ENST00000558745 MYCP01106 439 aaPredicted RBP16.33■□□□□ 0.2
TSPAN3-205ENST00000558745 MCCP23508 829 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms