RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 TSGA10IPQ3SY00 556 aa20.54■□□□□ 0.88
TPM1-214ENST00000558544 KIAA1755Q5JYT7 1200 aa20.54■□□□□ 0.88
TPM1-214ENST00000558544 OTUD7BQ6GQQ9 843 aa20.54■□□□□ 0.88
TPM1-214ENST00000558544 MKL1Q969V6 931 aa20.54■□□□□ 0.88
TPM1-214ENST00000558544 ZSCAN10Q96SZ4 725 aaPredicted RBP20.54■□□□□ 0.88
TPM1-214ENST00000558544 UBAC1Q9BSL1 405 aa20.54■□□□□ 0.88
TPM1-214ENST00000558544 GOPCQ9HD26 462 aa20.54■□□□□ 0.88
TPM1-214ENST00000558544 AGTPBP1Q9UPW5 1226 aa20.54■□□□□ 0.88
TPM1-214ENST00000558544 RLFQ13129 1914 aa20.53■□□□□ 0.88
TPM1-214ENST00000558544 VCAM1P19320 739 aa20.53■□□□□ 0.88
TPM1-214ENST00000558544 NOVP48745 357 aa20.53■□□□□ 0.88
TPM1-214ENST00000558544 ANTXR2P58335 489 aa20.53■□□□□ 0.88
TPM1-214ENST00000558544 KRT32Q14532 448 aa20.53■□□□□ 0.88
TPM1-214ENST00000558544 RCSD1Q6JBY9 416 aa20.53■□□□□ 0.88
TPM1-214ENST00000558544 SPICE1Q8N0Z3 855 aa20.53■□□□□ 0.88
TPM1-214ENST00000558544 NEK1Q96PY6 1258 aa20.53■□□□□ 0.88
TPM1-214ENST00000558544 RNF186Q9NXI6 227 aa20.53■□□□□ 0.88
TPM1-214ENST00000558544 PDHXO00330 501 aa20.52■□□□□ 0.88
TPM1-214ENST00000558544 CCDC178Q5BJE1 867 aa20.52■□□□□ 0.88
TPM1-214ENST00000558544 ENAHQ8N8S7 591 aaPredicted RBP20.52■□□□□ 0.88
TPM1-214ENST00000558544 TMEM47Q9BQJ4 181 aa20.52■□□□□ 0.88
TPM1-214ENST00000558544 BEGAINQ9BUH8 593 aa20.52■□□□□ 0.88
TPM1-214ENST00000558544 WBP1LQ9NX94 342 aa20.52■□□□□ 0.88
TPM1-214ENST00000558544 TRPA1O75762 1119 aa20.51■□□□□ 0.87
TPM1-214ENST00000558544 ALDH1A1P00352 501 aa20.51■□□□□ 0.87
TPM1-214ENST00000558544 TOP1P11387 765 aaKnown RBP20.51■□□□□ 0.87
TPM1-214ENST00000558544 TAF1CQ15572 869 aaPredicted RBP20.51■□□□□ 0.87
TPM1-214ENST00000558544 LPAR1Q92633 364 aa20.51■□□□□ 0.87
TPM1-214ENST00000558544 JAKMIP1Q96N16 626 aaKnown RBP20.51■□□□□ 0.87
TPM1-214ENST00000558544 TTC14Q96N46 770 aa20.51■□□□□ 0.87
TPM1-214ENST00000558544 ZCCHC17Q9NP64 241 aaKnown RBP20.51■□□□□ 0.87
TPM1-214ENST00000558544 COL11A1P12107 1806 aaPredicted RBP20.5■□□□□ 0.87
TPM1-214ENST00000558544 F5H6K3 240 aa20.5■□□□□ 0.87
TPM1-214ENST00000558544 IFIT3O14879 490 aaKnown RBP20.5■□□□□ 0.87
TPM1-214ENST00000558544 PRC1O43663 620 aa20.5■□□□□ 0.87
TPM1-214ENST00000558544 NDUFB10O96000 172 aa20.5■□□□□ 0.87
TPM1-214ENST00000558544 MCM5P33992 734 aa20.5■□□□□ 0.87
TPM1-214ENST00000558544 KLRC3Q07444 240 aa20.5■□□□□ 0.87
TPM1-214ENST00000558544 DGKHQ86XP1 1220 aa20.5■□□□□ 0.87
TPM1-214ENST00000558544 CHMP4CQ96CF2 233 aa20.5■□□□□ 0.87
TPM1-214ENST00000558544 RPAP3Q9H6T3 665 aaPredicted RBP20.5■□□□□ 0.87
TPM1-214ENST00000558544 SYNPO2Q9UMS6 1093 aa20.5■□□□□ 0.87
TPM1-214ENST00000558544 MTMR7Q9Y216 660 aa20.5■□□□□ 0.87
TPM1-214ENST00000558544 ERICH2A1L162 156 aa20.49■□□□□ 0.87
TPM1-214ENST00000558544 WDR46O15213 610 aaKnown RBP20.49■□□□□ 0.87
TPM1-214ENST00000558544 CYP2C8P10632 490 aa20.49■□□□□ 0.87
TPM1-214ENST00000558544 PABPC4Q13310 644 aaKnown RBP eCLIP20.49■□□□□ 0.871e-6■□□□□ 11.2
TPM1-214ENST00000558544 SART3Q15020 963 aaKnown RBP20.49■□□□□ 0.87
TPM1-214ENST00000558544 SEC23AQ15436 765 aa20.49■□□□□ 0.87
TPM1-214ENST00000558544 IFIT1BQ5T764 474 aaKnown RBP20.49■□□□□ 0.87
TPM1-214ENST00000558544 RASGRP2Q7LDG7 609 aa20.49■□□□□ 0.87
TPM1-214ENST00000558544 GMCL1P1Q8NEA9 526 aa20.49■□□□□ 0.87
TPM1-214ENST00000558544 NUP88Q99567 741 aaPredicted RBP20.49■□□□□ 0.87
TPM1-214ENST00000558544 SLC45A1Q9Y2W3 748 aa20.49■□□□□ 0.87
TPM1-214ENST00000558544 A0A0G2JMZ2 1700 aa20.49■□□□□ 0.87
TPM1-214ENST00000558544 CPA1P15085 419 aa20.48■□□□□ 0.87
TPM1-214ENST00000558544 HOXA7P31268 230 aaPredicted RBP20.48■□□□□ 0.87
TPM1-214ENST00000558544 CRHR2Q13324 411 aa20.48■□□□□ 0.87
TPM1-214ENST00000558544 TMEM67Q5HYA8 995 aa20.48■□□□□ 0.87
TPM1-214ENST00000558544 FAM83BQ5T0W9 1011 aa20.48■□□□□ 0.87
TPM1-214ENST00000558544 SLFN13Q68D06 897 aa20.48■□□□□ 0.87
TPM1-214ENST00000558544 ANKS1AQ92625 1134 aa20.48■□□□□ 0.87
TPM1-214ENST00000558544 TCEANC2Q96MN5 208 aa20.48■□□□□ 0.87
TPM1-214ENST00000558544 PARK7Q99497 189 aaKnown RBP20.48■□□□□ 0.87
TPM1-214ENST00000558544 LRRC2Q9BYS8 371 aa20.48■□□□□ 0.87
TPM1-214ENST00000558544 TANGO6Q9C0B7 1094 aa20.48■□□□□ 0.87
TPM1-214ENST00000558544 ASCC2Q9H1I8 757 aaPredicted RBP20.48■□□□□ 0.87
TPM1-214ENST00000558544 KAT14Q9H8E8 782 aa20.48■□□□□ 0.87
TPM1-214ENST00000558544 SAGE1Q9NXZ1 904 aa20.48■□□□□ 0.87
TPM1-214ENST00000558544 TSKSQ9UJT2 592 aa20.48■□□□□ 0.87
TPM1-214ENST00000558544 USP17L15C9J2P7 530 aa20.47■□□□□ 0.87
TPM1-214ENST00000558544 USP17L13C9JLJ4 530 aa20.47■□□□□ 0.87
TPM1-214ENST00000558544 USP17L11C9JVI0 530 aa20.47■□□□□ 0.87
TPM1-214ENST00000558544 USP17L18D6R9N7 530 aa20.47■□□□□ 0.87
TPM1-214ENST00000558544 USP17L22D6RA61 530 aa20.47■□□□□ 0.87
TPM1-214ENST00000558544 USP17L17D6RBQ6 530 aa20.47■□□□□ 0.87
TPM1-214ENST00000558544 USP17L19D6RCP7 530 aa20.47■□□□□ 0.87
TPM1-214ENST00000558544 USP17L20D6RJB6 530 aa20.47■□□□□ 0.87
TPM1-214ENST00000558544 CA12O43570 354 aa20.47■□□□□ 0.87
TPM1-214ENST00000558544 TBC1D8O95759 1140 aa20.47■□□□□ 0.87
TPM1-214ENST00000558544 HSPA1AP0DMV8 641 aaKnown RBP20.47■□□□□ 0.87
TPM1-214ENST00000558544 HSPA1BP0DMV9 641 aaKnown RBP20.47■□□□□ 0.87
TPM1-214ENST00000558544 CASTP20810 708 aaKnown RBP20.47■□□□□ 0.87
TPM1-214ENST00000558544 OSBPP22059 807 aa20.47■□□□□ 0.87
TPM1-214ENST00000558544 IRX3P78415 501 aaPredicted RBP20.47■□□□□ 0.87
TPM1-214ENST00000558544 USP17L24Q0WX57 530 aa20.47■□□□□ 0.87
TPM1-214ENST00000558544 WTAPQ15007 396 aa20.47■□□□□ 0.87
TPM1-214ENST00000558544 SENP2Q9HC62 589 aa20.47■□□□□ 0.87
TPM1-214ENST00000558544 ZFYVE28Q9HCC9 887 aa20.47■□□□□ 0.87
TPM1-214ENST00000558544 GPHNQ9NQX3 736 aaPredicted RBP20.47■□□□□ 0.87
TPM1-214ENST00000558544 PNMA3Q9UL41 463 aa20.47■□□□□ 0.87
TPM1-214ENST00000558544 SH2B2O14492 632 aaPredicted RBP20.46■□□□□ 0.87
TPM1-214ENST00000558544 HMGB1P09429 215 aaKnown RBP20.46■□□□□ 0.87
TPM1-214ENST00000558544 PSMA5P28066 241 aa20.46■□□□□ 0.87
TPM1-214ENST00000558544 BLOC1S2Q6QNY1 142 aa20.46■□□□□ 0.87
TPM1-214ENST00000558544 CATSPERGQ6ZRH7 1159 aa20.46■□□□□ 0.87
TPM1-214ENST00000558544 DHX32Q7L7V1 743 aaKnown RBP20.46■□□□□ 0.87
TPM1-214ENST00000558544 PNMA1Q8ND90 353 aa20.46■□□□□ 0.87
TPM1-214ENST00000558544 IGDCC4Q8TDY8 1250 aa20.46■□□□□ 0.87
TPM1-214ENST00000558544 TMEM87BQ96K49 555 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms