RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 RIC1Q4ADV7 1423 aa8.64□□□□□ -1.03
TRPM1-206ENST00000558212 NPC1L1Q9UHC9 1359 aa8.64□□□□□ -1.03
TRPM1-206ENST00000558212 PPFIA3O75145 1194 aa8.64□□□□□ -1.03
TRPM1-206ENST00000558212 TCF3P15923 654 aa8.64□□□□□ -1.03
TRPM1-206ENST00000558212 HOXA10P31260 410 aaPredicted RBP8.64□□□□□ -1.03
TRPM1-206ENST00000558212 SOX18P35713 384 aa8.64□□□□□ -1.03
TRPM1-206ENST00000558212 BACH2Q9BYV9 841 aa8.64□□□□□ -1.03
TRPM1-206ENST00000558212 BCL11AQ9H165 835 aa8.64□□□□□ -1.03
TRPM1-206ENST00000558212 PANK3Q9H999 370 aa8.64□□□□□ -1.03
TRPM1-206ENST00000558212 GNAT3A8MTJ3 354 aa8.63□□□□□ -1.03
TRPM1-206ENST00000558212 FAM155AB1AL88 458 aaPredicted RBP8.63□□□□□ -1.03
TRPM1-206ENST00000558212 EREGO14944 169 aa8.63□□□□□ -1.03
TRPM1-206ENST00000558212 PPIP5K2O43314 1243 aa8.63□□□□□ -1.03
TRPM1-206ENST00000558212 SORBS3O60504 671 aa8.63□□□□□ -1.03
TRPM1-206ENST00000558212 SASH3O75995 380 aa8.63□□□□□ -1.03
TRPM1-206ENST00000558212 MAP3K6O95382 1288 aa8.63□□□□□ -1.03
TRPM1-206ENST00000558212 TARSP26639 723 aaKnown RBP8.63□□□□□ -1.03
TRPM1-206ENST00000558212 GMPSP49915 693 aaPredicted RBP8.63□□□□□ -1.03
TRPM1-206ENST00000558212 SPEM2Q0P670 501 aa8.63□□□□□ -1.03
TRPM1-206ENST00000558212 PKN2Q16513 984 aaKnown RBP8.63□□□□□ -1.03
TRPM1-206ENST00000558212 HABP4Q5JVS0 413 aaKnown RBP8.63□□□□□ -1.03
TRPM1-206ENST00000558212 RGMBQ6NW40 437 aa8.63□□□□□ -1.03
TRPM1-206ENST00000558212 IL17REQ8NFR9 667 aa8.63□□□□□ -1.03
TRPM1-206ENST00000558212 RPGRQ92834 1020 aaKnown RBP8.63□□□□□ -1.03
TRPM1-206ENST00000558212 PMEPA1Q969W9 287 aa8.63□□□□□ -1.03
TRPM1-206ENST00000558212 GTPBP3Q969Y2 492 aaKnown RBP8.63□□□□□ -1.03
TRPM1-206ENST00000558212 SLC30A3Q99726 388 aa8.63□□□□□ -1.03
TRPM1-206ENST00000558212 POLR3GLQ9BT43 218 aa8.63□□□□□ -1.03
TRPM1-206ENST00000558212 NYXQ9GZU5 481 aa8.63□□□□□ -1.03
TRPM1-206ENST00000558212 RNF186Q9NXI6 227 aa8.63□□□□□ -1.03
TRPM1-206ENST00000558212 AK5Q9Y6K8 562 aa8.63□□□□□ -1.03
TRPM1-206ENST00000558212 CEMIPQ8WUJ3 1361 aa8.62□□□□□ -1.03
TRPM1-206ENST00000558212 ABCC12Q96J65 1359 aa8.62□□□□□ -1.03
TRPM1-206ENST00000558212 FAM177BA6PVY3 158 aa8.62□□□□□ -1.03
TRPM1-206ENST00000558212 MMP20O60882 483 aa8.62□□□□□ -1.03
TRPM1-206ENST00000558212 TRPA1O75762 1119 aa8.62□□□□□ -1.03
TRPM1-206ENST00000558212 KIF4AO95239 1232 aa8.62□□□□□ -1.03
TRPM1-206ENST00000558212 PIP4K2AP48426 406 aaPredicted RBP8.62□□□□□ -1.03
TRPM1-206ENST00000558212 KIF23Q02241 960 aaPredicted RBP8.62□□□□□ -1.03
TRPM1-206ENST00000558212 CXCL9Q07325 125 aa8.62□□□□□ -1.03
TRPM1-206ENST00000558212 PSMD2Q13200 908 aa8.62□□□□□ -1.03
TRPM1-206ENST00000558212 AOC3Q16853 763 aa8.62□□□□□ -1.03
TRPM1-206ENST00000558212 CRAMP1Q96RY5 1269 aa8.62□□□□□ -1.03
TRPM1-206ENST00000558212 NPHS2Q9NP85 383 aa8.62□□□□□ -1.03
TRPM1-206ENST00000558212 ZNRF3Q9ULT6 936 aa8.62□□□□□ -1.03
TRPM1-206ENST00000558212 USP16Q9Y5T5 823 aa8.62□□□□□ -1.03
TRPM1-206ENST00000558212 IBTKQ9P2D0 1353 aaPredicted RBP8.61□□□□□ -1.03
TRPM1-206ENST00000558212 BTBD11A6QL63 1104 aa8.61□□□□□ -1.03
TRPM1-206ENST00000558212 GIPC1O14908 333 aa8.61□□□□□ -1.03
TRPM1-206ENST00000558212 CTSHP09668 335 aa8.61□□□□□ -1.03
TRPM1-206ENST00000558212 CD33P20138 364 aa8.61□□□□□ -1.03
TRPM1-206ENST00000558212 FGFR3P22607 806 aa8.61□□□□□ -1.03
TRPM1-206ENST00000558212 IRS1P35568 1242 aa8.61□□□□□ -1.03
TRPM1-206ENST00000558212 TNIP1Q15025 636 aa8.61□□□□□ -1.03
TRPM1-206ENST00000558212 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.61□□□□□ -1.03
TRPM1-206ENST00000558212 PI16Q6UXB8 463 aa8.61□□□□□ -1.03
TRPM1-206ENST00000558212 Q6ZNB5 142 aa8.61□□□□□ -1.03
TRPM1-206ENST00000558212 C2orf69Q8N8R5 385 aa8.61□□□□□ -1.03
TRPM1-206ENST00000558212 SUPT20HQ8NEM7 779 aa8.61□□□□□ -1.03
TRPM1-206ENST00000558212 TRPM4Q8TD43 1214 aa8.61□□□□□ -1.03
TRPM1-206ENST00000558212 EPS8L3Q8TE67 593 aaKnown RBP8.61□□□□□ -1.03
TRPM1-206ENST00000558212 RBM17Q96I25 401 aaKnown RBP8.61□□□□□ -1.03
TRPM1-206ENST00000558212 TMX4Q9H1E5 349 aaPredicted RBP8.61□□□□□ -1.03
TRPM1-206ENST00000558212 GBA2Q9HCG7 927 aaPredicted RBP8.61□□□□□ -1.03
TRPM1-206ENST00000558212 SALL4Q9UJQ4 1053 aa8.61□□□□□ -1.03
TRPM1-206ENST00000558212 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.61□□□□□ -1.03
TRPM1-206ENST00000558212 DIAPH1O60610 1272 aaKnown RBP8.6□□□□□ -1.03
TRPM1-206ENST00000558212 CYP2E1P05181 493 aaPredicted RBP8.6□□□□□ -1.03
TRPM1-206ENST00000558212 SNRPA1P09661 255 aaKnown RBP8.6□□□□□ -1.03
TRPM1-206ENST00000558212 RARAP10276 462 aa8.6□□□□□ -1.03
TRPM1-206ENST00000558212 ZNF157P51786 506 aaPredicted RBP8.6□□□□□ -1.03
TRPM1-206ENST00000558212 TSNAXIP1Q2TAA8 658 aa8.6□□□□□ -1.03
TRPM1-206ENST00000558212 TTC39BQ5VTQ0 682 aaPredicted RBP8.6□□□□□ -1.03
TRPM1-206ENST00000558212 PEAR1Q5VY43 1037 aaPredicted RBP8.6□□□□□ -1.03
TRPM1-206ENST00000558212 USP48Q86UV5 1035 aa8.6□□□□□ -1.03
TRPM1-206ENST00000558212 RTFDC1Q9BY42 306 aaPredicted RBP8.6□□□□□ -1.03
TRPM1-206ENST00000558212 PCGF6Q9BYE7 350 aa8.6□□□□□ -1.03
TRPM1-206ENST00000558212 OSBPL7Q9BZF2 842 aa8.6□□□□□ -1.03
TRPM1-206ENST00000558212 C12orf49Q9H741 205 aa8.6□□□□□ -1.03
TRPM1-206ENST00000558212 TLR7Q9NYK1 1049 aaKnown RBP8.6□□□□□ -1.03
TRPM1-206ENST00000558212 PHF24Q9UPV7 400 aa8.6□□□□□ -1.03
TRPM1-206ENST00000558212 KNSTRNQ9Y448 316 aa8.6□□□□□ -1.03
TRPM1-206ENST00000558212 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.6□□□□□ -1.03
TRPM1-206ENST00000558212 MKI67P46013 3256 aaKnown RBP8.6□□□□□ -1.03
TRPM1-206ENST00000558212 H7C1D1 291 aa8.59□□□□□ -1.03
TRPM1-206ENST00000558212 KCNQ3O43525 872 aa8.59□□□□□ -1.03
TRPM1-206ENST00000558212 HMGB1P09429 215 aaKnown RBP8.59□□□□□ -1.03
TRPM1-206ENST00000558212 NFKB1P19838 968 aa8.59□□□□□ -1.03
TRPM1-206ENST00000558212 CES1P23141 567 aa8.59□□□□□ -1.03
TRPM1-206ENST00000558212 HLFQ16534 295 aa8.59□□□□□ -1.03
TRPM1-206ENST00000558212 KIAA0319Q5VV43 1072 aa8.59□□□□□ -1.03
TRPM1-206ENST00000558212 KRT26Q7Z3Y9 468 aa8.59□□□□□ -1.03
TRPM1-206ENST00000558212 KRT25Q7Z3Z0 450 aa8.59□□□□□ -1.03
TRPM1-206ENST00000558212 CRELD1Q96HD1 420 aa8.59□□□□□ -1.03
TRPM1-206ENST00000558212 SRCIN1Q9C0H9 1055 aa8.59□□□□□ -1.03
TRPM1-206ENST00000558212 MRS2Q9HD23 443 aa8.59□□□□□ -1.03
TRPM1-206ENST00000558212 CNOT7Q9UIV1 285 aaKnown RBP8.59□□□□□ -1.03
TRPM1-206ENST00000558212 ATP6V0A2Q9Y487 856 aa8.59□□□□□ -1.03
TRPM1-206ENST00000558212 PRAMEF22A3QJZ6 481 aa8.58□□□□□ -1.04
TRPM1-206ENST00000558212 ERVV-1B6SEH8 477 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms